RNA–Protein interactions for RNA: ENST00000588247.5

CLASRP-211, Transcript of CLK4 associating serine/arginine rich protein, humanhuman

TSL 2

Gene CLASRP, Length 599 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASRP-211ENST00000588247 NISCHQ9Y2I1 1504 aa48.63■■■■■ 5.38
CLASRP-211ENST00000588247 ABCC9O60706 1549 aa43.88■■■■■ 4.61
CLASRP-211ENST00000588247 CCDC180Q9P1Z9 1646 aa43.81■■■■■ 4.6
CLASRP-211ENST00000588247 RB1CC1Q8TDY2 1594 aa41.72■■■■■ 4.27
CLASRP-211ENST00000588247 NACADO15069 1562 aa41.39■■■■■ 4.22
CLASRP-211ENST00000588247 DNAJC5BQ9UF47 199 aa41.25■■■■■ 4.19
CLASRP-211ENST00000588247 DCAF8L2P0C7V8 631 aa41.01■■■■■ 4.16
CLASRP-211ENST00000588247 UNC13AQ9UPW8 1703 aa40.9■■■■■ 4.14
CLASRP-211ENST00000588247 PABPN1Q86U42 306 aaKnown RBP eCLIP40.76■■■■■ 4.12
CLASRP-211ENST00000588247 MYO15BQ96JP2 1530 aa40.76■■■■■ 4.12
CLASRP-211ENST00000588247 BICRAQ9NZM4 1560 aa40.53■■■■■ 4.08
CLASRP-211ENST00000588247 ZCCHC6Q5VYS8 1495 aaKnown RBP40.3■■■■■ 4.04
CLASRP-211ENST00000588247 DCAF1Q9Y4B6 1507 aa40.17■■■■■ 4.02
CLASRP-211ENST00000588247 SHROOM4Q9ULL8 1493 aa39.95■■■■□ 3.99
CLASRP-211ENST00000588247 SCRIBQ14160 1630 aa39.87■■■■□ 3.97
CLASRP-211ENST00000588247 CC2D2AQ9P2K1 1620 aa39.68■■■■□ 3.94
CLASRP-211ENST00000588247 EIF4G1Q04637 1599 aaKnown RBP39.55■■■■□ 3.92
CLASRP-211ENST00000588247 CECR2Q9BXF3 1484 aa39.54■■■■□ 3.92
CLASRP-211ENST00000588247 NCAPD3P42695 1498 aa38.17■■■■□ 3.7
CLASRP-211ENST00000588247 ATAD2BQ9ULI0 1458 aa38.04■■■■□ 3.68
CLASRP-211ENST00000588247 SMARCA4P51532 1647 aa38.02■■■■□ 3.68
CLASRP-211ENST00000588247 DNAJC5Q9H3Z4 198 aa38■■■■□ 3.67
CLASRP-211ENST00000588247 SMARCA2P51531 1590 aa37.96■■■■□ 3.67
CLASRP-211ENST00000588247 HMGXB3Q12766 1538 aa37.93■■■■□ 3.66
CLASRP-211ENST00000588247 CUX2O14529 1486 aa37.9■■■■□ 3.66
CLASRP-211ENST00000588247 ERCC6Q03468 1493 aa37.9■■■■□ 3.66
CLASRP-211ENST00000588247 BAZ1AQ9NRL2 1556 aaPredicted RBP37.78■■■■□ 3.64
CLASRP-211ENST00000588247 BAZ1BQ9UIG0 1483 aaKnown RBP37.68■■■■□ 3.62
CLASRP-211ENST00000588247 NESP48681 1621 aa37.65■■■■□ 3.62
CLASRP-211ENST00000588247 PEG3Q9GZU2 1588 aa37.65■■■■□ 3.62
CLASRP-211ENST00000588247 MROH2BQ7Z745 1585 aa37.48■■■■□ 3.59
CLASRP-211ENST00000588247 LAMC3Q9Y6N6 1575 aa37.4■■■■□ 3.58
CLASRP-211ENST00000588247 THOC2Q8NI27 1593 aaKnown RBP37.38■■■■□ 3.58
CLASRP-211ENST00000588247 KIF21AQ7Z4S6 1674 aa37.26■■■■□ 3.56
CLASRP-211ENST00000588247 PDS5BQ9NTI5 1447 aa37.12■■■■□ 3.53
CLASRP-211ENST00000588247 WIZO95785 1651 aa37.06■■■■□ 3.52
CLASRP-211ENST00000588247 CADPSQ9ULU8 1353 aa36.98■■■■□ 3.51
CLASRP-211ENST00000588247 MRC2Q9UBG0 1479 aa36.85■■■■□ 3.49
CLASRP-211ENST00000588247 WDR62O43379 1518 aa36.8■■■■□ 3.48
CLASRP-211ENST00000588247 CEP164Q9UPV0 1460 aa36.68■■■■□ 3.46
CLASRP-211ENST00000588247 RSF1Q96T23 1441 aaPredicted RBP36.6■■■■□ 3.45
CLASRP-211ENST00000588247 FANCD2Q9BXW9 1451 aa36.6■■■■□ 3.45
CLASRP-211ENST00000588247 TOP2AP11388 1531 aaKnown RBP36.56■■■■□ 3.44
CLASRP-211ENST00000588247 CFTRP13569 1480 aa36.56■■■■□ 3.44
CLASRP-211ENST00000588247 PRDM2Q13029 1718 aa36.34■■■■□ 3.41
CLASRP-211ENST00000588247 URB2Q14146 1524 aaKnown RBP36.33■■■■□ 3.41
CLASRP-211ENST00000588247 TRIM41Q8WV44 630 aa36.27■■■■□ 3.4
CLASRP-211ENST00000588247 CCDC88BA6NC98 1476 aa36.11■■■■□ 3.37
CLASRP-211ENST00000588247 OSCARQ8IYS5 282 aa36.06■■■■□ 3.36
CLASRP-211ENST00000588247 IFT140Q96RY7 1462 aa35.93■■■■□ 3.34
CLASRP-211ENST00000588247 TOPBP1Q92547 1522 aa35.91■■■■□ 3.34
CLASRP-211ENST00000588247 ZNF608Q9ULD9 1512 aaPredicted RBP35.89■■■■□ 3.34
CLASRP-211ENST00000588247 ABCC8Q09428 1581 aa35.79■■■■□ 3.32
CLASRP-211ENST00000588247 DNMBPQ6XZF7 1577 aa35.78■■■■□ 3.32
CLASRP-211ENST00000588247 EIF4G3O43432 1585 aaKnown RBP35.76■■■■□ 3.31
CLASRP-211ENST00000588247 RIMBP3CA6NJZ7 1639 aa35.74■■■■□ 3.31
CLASRP-211ENST00000588247 RIMBP3BA6NNM3 1639 aa35.74■■■■□ 3.31
CLASRP-211ENST00000588247 RIMBP3Q9UFD9 1639 aa35.74■■■■□ 3.31
CLASRP-211ENST00000588247 TARBP1Q13395 1621 aaKnown RBP35.64■■■■□ 3.3
CLASRP-211ENST00000588247 ARHGEF11O15085 1522 aa35.57■■■■□ 3.29
CLASRP-211ENST00000588247 CHD1O14646 1710 aa35.56■■■■□ 3.28
CLASRP-211ENST00000588247 POLA1P09884 1462 aaPredicted RBP35.53■■■■□ 3.28
CLASRP-211ENST00000588247 AQRO60306 1485 aaKnown RBP eCLIP35.52■■■■□ 3.28
CLASRP-211ENST00000588247 RAD54L2Q9Y4B4 1467 aa35.38■■■■□ 3.25
CLASRP-211ENST00000588247 SOGA1O94964 1423 aa35.32■■■■□ 3.24
CLASRP-211ENST00000588247 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
CLASRP-211ENST00000588247 FBLN2P98095 1184 aa35.28■■■■□ 3.24
CLASRP-211ENST00000588247 WDR97A6NE52 1622 aa35.27■■■■□ 3.24
CLASRP-211ENST00000588247 TDRD9Q8NDG6 1382 aaKnown RBP35.26■■■■□ 3.24
CLASRP-211ENST00000588247 CYB5RLQ6IPT4 315 aa35.23■■■■□ 3.23
CLASRP-211ENST00000588247 CUX1P39880 1505 aa35.22■■■■□ 3.23
CLASRP-211ENST00000588247 ARAP1Q96P48 1450 aa35.21■■■■□ 3.23
CLASRP-211ENST00000588247 SNAPC4Q5SXM2 1469 aa35.19■■■■□ 3.22
CLASRP-211ENST00000588247 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
CLASRP-211ENST00000588247 CLASP1Q7Z460 1538 aa35.09■■■■□ 3.21
CLASRP-211ENST00000588247 GRIN2BQ13224 1484 aa35.06■■■■□ 3.2
CLASRP-211ENST00000588247 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
CLASRP-211ENST00000588247 PBRM1Q86U86 1689 aa35.02■■■■□ 3.2
CLASRP-211ENST00000588247 CHMP7Q8WUX9 453 aaPredicted RBP34.99■■■■□ 3.19
CLASRP-211ENST00000588247 SYNJ2O15056 1496 aa34.97■■■■□ 3.19
CLASRP-211ENST00000588247 GAPVD1Q14C86 1478 aa34.91■■■■□ 3.18
CLASRP-211ENST00000588247 TRHP20396 242 aaPredicted RBP34.9■■■■□ 3.18
CLASRP-211ENST00000588247 ABCA5Q8WWZ7 1642 aa34.89■■■■□ 3.18
CLASRP-211ENST00000588247 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
CLASRP-211ENST00000588247 SUPT5HO00267 1087 aaKnown RBP34.79■■■■□ 3.16
CLASRP-211ENST00000588247 BIVM-ERCC5R4GMW8 1640 aa34.67■■■■□ 3.14
CLASRP-211ENST00000588247 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
CLASRP-211ENST00000588247 TOP2BQ02880 1626 aa34.63■■■■□ 3.13
CLASRP-211ENST00000588247 ADAMTS12P58397 1594 aa34.63■■■■□ 3.13
CLASRP-211ENST00000588247 GRIN2AQ12879 1464 aa34.63■■■■□ 3.13
CLASRP-211ENST00000588247 CEP170Q5SW79 1584 aa34.54■■■■□ 3.12
CLASRP-211ENST00000588247 ERCC6L2Q5T890 1561 aa34.53■■■■□ 3.12
CLASRP-211ENST00000588247 NUP160Q12769 1436 aa34.51■■■■□ 3.12
CLASRP-211ENST00000588247 FHAD1B1AJZ9 1412 aa34.46■■■■□ 3.11
CLASRP-211ENST00000588247 ERICH3Q5RHP9 1530 aa34.44■■■■□ 3.1
CLASRP-211ENST00000588247 SHROOM2Q13796 1616 aa34.43■■■■□ 3.1
CLASRP-211ENST00000588247 RUSC2Q8N2Y8 1516 aa34.16■■■■□ 3.06
CLASRP-211ENST00000588247 PRG4Q92954 1404 aaPredicted RBP34.16■■■■□ 3.06
CLASRP-211ENST00000588247 KIF13AQ9H1H9 1805 aa34.1■■■■□ 3.05
CLASRP-211ENST00000588247 JPH4Q96JJ6 628 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms