RNA–Protein interactions for RNA: ENST00000588237.5

GRN-213, Transcript of granulin precursor, humanhuman

TSL 5

Gene GRN, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-213ENST00000588237 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
GRN-213ENST00000588237 ABCC9O60706 1549 aa29.15■■■□□ 2.26
GRN-213ENST00000588237 CCDC180Q9P1Z9 1646 aa28.99■■■□□ 2.23
GRN-213ENST00000588237 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
GRN-213ENST00000588237 DNAJC5BQ9UF47 199 aa27.6■■■□□ 2.01
GRN-213ENST00000588237 DCAF8L2P0C7V8 631 aa27.44■■□□□ 1.98
GRN-213ENST00000588237 NACADO15069 1562 aa27.35■■□□□ 1.97
GRN-213ENST00000588237 PABPN1Q86U42 306 aaKnown RBP eCLIP27.13■■□□□ 1.93
GRN-213ENST00000588237 MYO15BQ96JP2 1530 aa26.99■■□□□ 1.91
GRN-213ENST00000588237 UNC13AQ9UPW8 1703 aa26.99■■□□□ 1.91
GRN-213ENST00000588237 ZCCHC6Q5VYS8 1495 aaKnown RBP26.96■■□□□ 1.91
GRN-213ENST00000588237 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
GRN-213ENST00000588237 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
GRN-213ENST00000588237 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
GRN-213ENST00000588237 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
GRN-213ENST00000588237 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
GRN-213ENST00000588237 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
GRN-213ENST00000588237 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
GRN-213ENST00000588237 DNAJC5Q9H3Z4 198 aa25.58■■□□□ 1.69
GRN-213ENST00000588237 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
GRN-213ENST00000588237 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
GRN-213ENST00000588237 CUX2O14529 1486 aa25.21■■□□□ 1.63
GRN-213ENST00000588237 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
GRN-213ENST00000588237 BAZ1AQ9NRL2 1556 aaPredicted RBP25.2■■□□□ 1.62
GRN-213ENST00000588237 ATAD2BQ9ULI0 1458 aa25.18■■□□□ 1.62
GRN-213ENST00000588237 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
GRN-213ENST00000588237 HMGXB3Q12766 1538 aa25.04■■□□□ 1.6
GRN-213ENST00000588237 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
GRN-213ENST00000588237 BAZ1BQ9UIG0 1483 aaKnown RBP25.01■■□□□ 1.59
GRN-213ENST00000588237 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
GRN-213ENST00000588237 NESP48681 1621 aa24.94■■□□□ 1.58
GRN-213ENST00000588237 WIZO95785 1651 aa24.79■■□□□ 1.56
GRN-213ENST00000588237 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
GRN-213ENST00000588237 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
GRN-213ENST00000588237 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.54
GRN-213ENST00000588237 RSF1Q96T23 1441 aaPredicted RBP24.63■■□□□ 1.53
GRN-213ENST00000588237 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
GRN-213ENST00000588237 CADPSQ9ULU8 1353 aa24.5■■□□□ 1.51
GRN-213ENST00000588237 TOP2AP11388 1531 aaKnown RBP24.46■■□□□ 1.51
GRN-213ENST00000588237 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.5
GRN-213ENST00000588237 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
GRN-213ENST00000588237 WDR62O43379 1518 aa24.32■■□□□ 1.48
GRN-213ENST00000588237 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
GRN-213ENST00000588237 CFTRP13569 1480 aa24.24■■□□□ 1.47
GRN-213ENST00000588237 FANCD2Q9BXW9 1451 aa24.21■■□□□ 1.47
GRN-213ENST00000588237 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
GRN-213ENST00000588237 PRDM2Q13029 1718 aa24.12■■□□□ 1.45
GRN-213ENST00000588237 OSCARQ8IYS5 282 aa24.11■■□□□ 1.45
GRN-213ENST00000588237 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
GRN-213ENST00000588237 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
GRN-213ENST00000588237 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
GRN-213ENST00000588237 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
GRN-213ENST00000588237 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
GRN-213ENST00000588237 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
GRN-213ENST00000588237 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
GRN-213ENST00000588237 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
GRN-213ENST00000588237 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
GRN-213ENST00000588237 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
GRN-213ENST00000588237 ARHGEF11O15085 1522 aa23.64■■□□□ 1.37
GRN-213ENST00000588237 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
GRN-213ENST00000588237 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
GRN-213ENST00000588237 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
GRN-213ENST00000588237 AQRO60306 1485 aaKnown RBP eCLIP23.54■■□□□ 1.362e-7■■■■■ 32.2
GRN-213ENST00000588237 TARBP1Q13395 1621 aaKnown RBP23.53■■□□□ 1.36
GRN-213ENST00000588237 FBLN2P98095 1184 aa23.52■■□□□ 1.36
GRN-213ENST00000588237 CHD1O14646 1710 aa23.5■■□□□ 1.35
GRN-213ENST00000588237 CUX1P39880 1505 aa23.5■■□□□ 1.35
GRN-213ENST00000588237 SOGA1O94964 1423 aa23.5■■□□□ 1.35
GRN-213ENST00000588237 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
GRN-213ENST00000588237 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
GRN-213ENST00000588237 TRHP20396 242 aaPredicted RBP23.42■■□□□ 1.34
GRN-213ENST00000588237 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
GRN-213ENST00000588237 ARAP1Q96P48 1450 aa23.37■■□□□ 1.33
GRN-213ENST00000588237 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
GRN-213ENST00000588237 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
GRN-213ENST00000588237 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
GRN-213ENST00000588237 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
GRN-213ENST00000588237 BIVM-ERCC5R4GMW8 1640 aa23.23■■□□□ 1.31
GRN-213ENST00000588237 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
GRN-213ENST00000588237 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
GRN-213ENST00000588237 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
GRN-213ENST00000588237 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
GRN-213ENST00000588237 ABCA10Q8WWZ4 1543 aa23.21■■□□□ 1.31
GRN-213ENST00000588237 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
GRN-213ENST00000588237 MAGI1Q96QZ7 1491 aaPredicted RBP23.2■■□□□ 1.3
GRN-213ENST00000588237 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
GRN-213ENST00000588237 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
GRN-213ENST00000588237 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
GRN-213ENST00000588237 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
GRN-213ENST00000588237 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
GRN-213ENST00000588237 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
GRN-213ENST00000588237 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
GRN-213ENST00000588237 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
GRN-213ENST00000588237 CEP170Q5SW79 1584 aa22.82■■□□□ 1.24
GRN-213ENST00000588237 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
GRN-213ENST00000588237 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
GRN-213ENST00000588237 NUP160Q12769 1436 aa22.8■■□□□ 1.24
GRN-213ENST00000588237 IGF1RP08069 1367 aa22.72■■□□□ 1.23
GRN-213ENST00000588237 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
GRN-213ENST00000588237 CUL7Q14999 1698 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms