RNA–Protein interactions for RNA: ENST00000588232.5

ATF7-210, Transcript of activating transcription factor 7, humanhuman

TSL 4

Gene ATF7, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7-210ENST00000588232 NISCHQ9Y2I1 1504 aa27.68■■■□□ 2.02
ATF7-210ENST00000588232 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
ATF7-210ENST00000588232 ABCC9O60706 1549 aa24.21■■□□□ 1.47
ATF7-210ENST00000588232 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.32
ATF7-210ENST00000588232 NACADO15069 1562 aa23.23■■□□□ 1.31
ATF7-210ENST00000588232 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
ATF7-210ENST00000588232 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
ATF7-210ENST00000588232 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
ATF7-210ENST00000588232 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
ATF7-210ENST00000588232 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
ATF7-210ENST00000588232 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
ATF7-210ENST00000588232 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
ATF7-210ENST00000588232 DNAJC5BQ9UF47 199 aa22.47■■□□□ 1.19
ATF7-210ENST00000588232 SCRIBQ14160 1630 aa22.41■■□□□ 1.18
ATF7-210ENST00000588232 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
ATF7-210ENST00000588232 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
ATF7-210ENST00000588232 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
ATF7-210ENST00000588232 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
ATF7-210ENST00000588232 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
ATF7-210ENST00000588232 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
ATF7-210ENST00000588232 ATAD2BQ9ULI0 1458 aa21.44■■□□□ 1.02
ATF7-210ENST00000588232 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
ATF7-210ENST00000588232 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
ATF7-210ENST00000588232 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
ATF7-210ENST00000588232 HMGXB3Q12766 1538 aa21.33■■□□□ 1
ATF7-210ENST00000588232 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
ATF7-210ENST00000588232 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
ATF7-210ENST00000588232 WIZO95785 1651 aa21.06■□□□□ 0.96
ATF7-210ENST00000588232 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
ATF7-210ENST00000588232 NESP48681 1621 aa20.94■□□□□ 0.94
ATF7-210ENST00000588232 LAMC3Q9Y6N6 1575 aa20.9■□□□□ 0.94
ATF7-210ENST00000588232 ERCC6Q03468 1493 aa20.84■□□□□ 0.93
ATF7-210ENST00000588232 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
ATF7-210ENST00000588232 CADPSQ9ULU8 1353 aa20.81■□□□□ 0.92
ATF7-210ENST00000588232 CUX2O14529 1486 aa20.77■□□□□ 0.92
ATF7-210ENST00000588232 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
ATF7-210ENST00000588232 KIF21AQ7Z4S6 1674 aa20.69■□□□□ 0.9
ATF7-210ENST00000588232 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
ATF7-210ENST00000588232 CFTRP13569 1480 aa20.68■□□□□ 0.9
ATF7-210ENST00000588232 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
ATF7-210ENST00000588232 FANCD2Q9BXW9 1451 aa20.53■□□□□ 0.88
ATF7-210ENST00000588232 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.88
ATF7-210ENST00000588232 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
ATF7-210ENST00000588232 WDR62O43379 1518 aa20.5■□□□□ 0.87
ATF7-210ENST00000588232 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
ATF7-210ENST00000588232 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
ATF7-210ENST00000588232 DNAJC5Q9H3Z4 198 aa20.35■□□□□ 0.85
ATF7-210ENST00000588232 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
ATF7-210ENST00000588232 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
ATF7-210ENST00000588232 TOPBP1Q92547 1522 aa20.2■□□□□ 0.82
ATF7-210ENST00000588232 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
ATF7-210ENST00000588232 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
ATF7-210ENST00000588232 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
ATF7-210ENST00000588232 TARBP1Q13395 1621 aaKnown RBP20.03■□□□□ 0.8
ATF7-210ENST00000588232 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
ATF7-210ENST00000588232 CUX1P39880 1505 aa19.99■□□□□ 0.79
ATF7-210ENST00000588232 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
ATF7-210ENST00000588232 SOGA1O94964 1423 aa19.93■□□□□ 0.78
ATF7-210ENST00000588232 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
ATF7-210ENST00000588232 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
ATF7-210ENST00000588232 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.785e-7■■■■□ 19.7
ATF7-210ENST00000588232 OSCARQ8IYS5 282 aa19.87■□□□□ 0.77
ATF7-210ENST00000588232 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
ATF7-210ENST00000588232 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
ATF7-210ENST00000588232 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
ATF7-210ENST00000588232 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
ATF7-210ENST00000588232 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
ATF7-210ENST00000588232 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
ATF7-210ENST00000588232 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
ATF7-210ENST00000588232 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
ATF7-210ENST00000588232 CHD1O14646 1710 aa19.71■□□□□ 0.75
ATF7-210ENST00000588232 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
ATF7-210ENST00000588232 GAPVD1Q14C86 1478 aa19.69■□□□□ 0.74
ATF7-210ENST00000588232 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
ATF7-210ENST00000588232 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
ATF7-210ENST00000588232 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
ATF7-210ENST00000588232 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
ATF7-210ENST00000588232 FBLN2P98095 1184 aa19.59■□□□□ 0.73
ATF7-210ENST00000588232 CHMP7Q8WUX9 453 aaPredicted RBP19.57■□□□□ 0.72
ATF7-210ENST00000588232 RIMBP3CA6NJZ7 1639 aa19.56■□□□□ 0.72
ATF7-210ENST00000588232 RIMBP3BA6NNM3 1639 aa19.56■□□□□ 0.72
ATF7-210ENST00000588232 RIMBP3Q9UFD9 1639 aa19.56■□□□□ 0.72
ATF7-210ENST00000588232 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
ATF7-210ENST00000588232 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
ATF7-210ENST00000588232 ERICH3Q5RHP9 1530 aa19.53■□□□□ 0.72
ATF7-210ENST00000588232 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
ATF7-210ENST00000588232 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
ATF7-210ENST00000588232 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
ATF7-210ENST00000588232 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
ATF7-210ENST00000588232 NUP160Q12769 1436 aa19.42■□□□□ 0.7
ATF7-210ENST00000588232 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
ATF7-210ENST00000588232 IGF1RP08069 1367 aa19.38■□□□□ 0.69
ATF7-210ENST00000588232 CEP170Q5SW79 1584 aa19.38■□□□□ 0.69
ATF7-210ENST00000588232 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
ATF7-210ENST00000588232 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
ATF7-210ENST00000588232 SHROOM2Q13796 1616 aa19.3■□□□□ 0.68
ATF7-210ENST00000588232 CUL7Q14999 1698 aa19.29■□□□□ 0.68
ATF7-210ENST00000588232 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
ATF7-210ENST00000588232 CARMIL1Q5VZK9 1371 aa19.21■□□□□ 0.67
ATF7-210ENST00000588232 RUSC2Q8N2Y8 1516 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms