RNA–Protein interactions for RNA: ENST00000588231.1

NCAN-203, Transcript of neurocan, humanhuman

TSL 3

Gene NCAN, Length 545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-203ENST00000588231 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.27
NCAN-203ENST00000588231 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
NCAN-203ENST00000588231 ABCC9O60706 1549 aa25.88■■□□□ 1.73
NCAN-203ENST00000588231 RB1CC1Q8TDY2 1594 aa24.74■■□□□ 1.55
NCAN-203ENST00000588231 NACADO15069 1562 aa24.63■■□□□ 1.53
NCAN-203ENST00000588231 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
NCAN-203ENST00000588231 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
NCAN-203ENST00000588231 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
NCAN-203ENST00000588231 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
NCAN-203ENST00000588231 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
NCAN-203ENST00000588231 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
NCAN-203ENST00000588231 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
NCAN-203ENST00000588231 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
NCAN-203ENST00000588231 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
NCAN-203ENST00000588231 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
NCAN-203ENST00000588231 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
NCAN-203ENST00000588231 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
NCAN-203ENST00000588231 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
NCAN-203ENST00000588231 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
NCAN-203ENST00000588231 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
NCAN-203ENST00000588231 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
NCAN-203ENST00000588231 SMARCA2P51531 1590 aa22.64■■□□□ 1.22
NCAN-203ENST00000588231 BAZ1AQ9NRL2 1556 aaPredicted RBP22.64■■□□□ 1.22
NCAN-203ENST00000588231 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
NCAN-203ENST00000588231 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
NCAN-203ENST00000588231 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
NCAN-203ENST00000588231 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
NCAN-203ENST00000588231 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
NCAN-203ENST00000588231 NESP48681 1621 aa22.3■■□□□ 1.16
NCAN-203ENST00000588231 CUX2O14529 1486 aa22.23■■□□□ 1.15
NCAN-203ENST00000588231 WIZO95785 1651 aa22.23■■□□□ 1.15
NCAN-203ENST00000588231 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
NCAN-203ENST00000588231 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
NCAN-203ENST00000588231 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.12
NCAN-203ENST00000588231 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
NCAN-203ENST00000588231 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
NCAN-203ENST00000588231 THOC2Q8NI27 1593 aaKnown RBP22.02■■□□□ 1.12
NCAN-203ENST00000588231 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
NCAN-203ENST00000588231 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
NCAN-203ENST00000588231 CFTRP13569 1480 aa21.86■■□□□ 1.09
NCAN-203ENST00000588231 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
NCAN-203ENST00000588231 FANCD2Q9BXW9 1451 aa21.8■■□□□ 1.08
NCAN-203ENST00000588231 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
NCAN-203ENST00000588231 WDR62O43379 1518 aa21.78■■□□□ 1.08
NCAN-203ENST00000588231 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
NCAN-203ENST00000588231 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
NCAN-203ENST00000588231 URB2Q14146 1524 aaKnown RBP21.61■■□□□ 1.05
NCAN-203ENST00000588231 TOPBP1Q92547 1522 aa21.41■■□□□ 1.02
NCAN-203ENST00000588231 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
NCAN-203ENST00000588231 IFT140Q96RY7 1462 aa21.37■■□□□ 1.01
NCAN-203ENST00000588231 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
NCAN-203ENST00000588231 ZNF608Q9ULD9 1512 aaPredicted RBP21.31■■□□□ 1
NCAN-203ENST00000588231 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
NCAN-203ENST00000588231 OSCARQ8IYS5 282 aa21.29■■□□□ 1
NCAN-203ENST00000588231 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
NCAN-203ENST00000588231 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
NCAN-203ENST00000588231 EIF4G3O43432 1585 aaKnown RBP21.18■□□□□ 0.98
NCAN-203ENST00000588231 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
NCAN-203ENST00000588231 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
NCAN-203ENST00000588231 SOGA1O94964 1423 aa21.12■□□□□ 0.97
NCAN-203ENST00000588231 CUX1P39880 1505 aa21.12■□□□□ 0.97
NCAN-203ENST00000588231 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
NCAN-203ENST00000588231 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
NCAN-203ENST00000588231 TDRD9Q8NDG6 1382 aaKnown RBP21.06■□□□□ 0.96
NCAN-203ENST00000588231 WDR97A6NE52 1622 aa21■□□□□ 0.95
NCAN-203ENST00000588231 CHD1O14646 1710 aa20.98■□□□□ 0.95
NCAN-203ENST00000588231 FBLN2P98095 1184 aa20.96■□□□□ 0.95
NCAN-203ENST00000588231 RIMBP3CA6NJZ7 1639 aa20.94■□□□□ 0.94
NCAN-203ENST00000588231 RIMBP3BA6NNM3 1639 aa20.94■□□□□ 0.94
NCAN-203ENST00000588231 RIMBP3Q9UFD9 1639 aa20.94■□□□□ 0.94
NCAN-203ENST00000588231 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
NCAN-203ENST00000588231 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
NCAN-203ENST00000588231 ARHGEF11O15085 1522 aa20.9■□□□□ 0.94
NCAN-203ENST00000588231 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
NCAN-203ENST00000588231 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
NCAN-203ENST00000588231 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
NCAN-203ENST00000588231 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
NCAN-203ENST00000588231 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
NCAN-203ENST00000588231 TOP2BQ02880 1626 aa20.84■□□□□ 0.93
NCAN-203ENST00000588231 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
NCAN-203ENST00000588231 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
NCAN-203ENST00000588231 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
NCAN-203ENST00000588231 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
NCAN-203ENST00000588231 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
NCAN-203ENST00000588231 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.92
NCAN-203ENST00000588231 CYB5RLQ6IPT4 315 aa20.76■□□□□ 0.91
NCAN-203ENST00000588231 ARAP1Q96P48 1450 aa20.71■□□□□ 0.91
NCAN-203ENST00000588231 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
NCAN-203ENST00000588231 GRIN2AQ12879 1464 aa20.63■□□□□ 0.89
NCAN-203ENST00000588231 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
NCAN-203ENST00000588231 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
NCAN-203ENST00000588231 NUP160Q12769 1436 aa20.58■□□□□ 0.88
NCAN-203ENST00000588231 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
NCAN-203ENST00000588231 SHROOM2Q13796 1616 aa20.45■□□□□ 0.87
NCAN-203ENST00000588231 ERCC6L2Q5T890 1561 aa20.45■□□□□ 0.86
NCAN-203ENST00000588231 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
NCAN-203ENST00000588231 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
NCAN-203ENST00000588231 IGF1RP08069 1367 aa20.44■□□□□ 0.86
NCAN-203ENST00000588231 JPH4Q96JJ6 628 aa20.39■□□□□ 0.85
NCAN-203ENST00000588231 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms