RNA–Protein interactions for RNA: ENST00000588229.1

TRMT1-210, Transcript of tRNA methyltransferase 1, humanhuman

TSL 2

Gene TRMT1, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-210ENST00000588229 NISCHQ9Y2I1 1504 aa27.51■■■□□ 2
TRMT1-210ENST00000588229 ABCC9O60706 1549 aa26.14■■□□□ 1.77
TRMT1-210ENST00000588229 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
TRMT1-210ENST00000588229 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
TRMT1-210ENST00000588229 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
TRMT1-210ENST00000588229 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.46
TRMT1-210ENST00000588229 DNAJC5Q9H3Z4 198 aa23.99■■□□□ 1.43
TRMT1-210ENST00000588229 NACADO15069 1562 aa23.95■■□□□ 1.42
TRMT1-210ENST00000588229 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
TRMT1-210ENST00000588229 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
TRMT1-210ENST00000588229 DCAF8L2P0C7V8 631 aa23.63■■□□□ 1.37
TRMT1-210ENST00000588229 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
TRMT1-210ENST00000588229 CC2D2AQ9P2K1 1620 aa23.54■■□□□ 1.36
TRMT1-210ENST00000588229 MYO15BQ96JP2 1530 aa23.26■■□□□ 1.31
TRMT1-210ENST00000588229 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
TRMT1-210ENST00000588229 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
TRMT1-210ENST00000588229 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
TRMT1-210ENST00000588229 SCRIBQ14160 1630 aa22.88■■□□□ 1.25
TRMT1-210ENST00000588229 CUX2O14529 1486 aa22.85■■□□□ 1.25
TRMT1-210ENST00000588229 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
TRMT1-210ENST00000588229 ERCC6Q03468 1493 aa22.58■■□□□ 1.2
TRMT1-210ENST00000588229 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
TRMT1-210ENST00000588229 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
TRMT1-210ENST00000588229 NESP48681 1621 aa22.19■■□□□ 1.14
TRMT1-210ENST00000588229 THOC2Q8NI27 1593 aaKnown RBP22.15■■□□□ 1.14
TRMT1-210ENST00000588229 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
TRMT1-210ENST00000588229 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
TRMT1-210ENST00000588229 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
TRMT1-210ENST00000588229 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
TRMT1-210ENST00000588229 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
TRMT1-210ENST00000588229 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
TRMT1-210ENST00000588229 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
TRMT1-210ENST00000588229 BAZ1AQ9NRL2 1556 aaPredicted RBP21.75■■□□□ 1.07
TRMT1-210ENST00000588229 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
TRMT1-210ENST00000588229 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
TRMT1-210ENST00000588229 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
TRMT1-210ENST00000588229 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
TRMT1-210ENST00000588229 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
TRMT1-210ENST00000588229 WDR62O43379 1518 aa21.59■■□□□ 1.05
TRMT1-210ENST00000588229 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
TRMT1-210ENST00000588229 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
TRMT1-210ENST00000588229 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
TRMT1-210ENST00000588229 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
TRMT1-210ENST00000588229 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
TRMT1-210ENST00000588229 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
TRMT1-210ENST00000588229 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
TRMT1-210ENST00000588229 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
TRMT1-210ENST00000588229 HRCP23327 699 aa21.36■■□□□ 1.01
TRMT1-210ENST00000588229 TRHP20396 242 aaPredicted RBP21.3■■□□□ 1
TRMT1-210ENST00000588229 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
TRMT1-210ENST00000588229 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
TRMT1-210ENST00000588229 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
TRMT1-210ENST00000588229 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
TRMT1-210ENST00000588229 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
TRMT1-210ENST00000588229 PCGF6Q9BYE7 350 aa21.19■□□□□ 0.98
TRMT1-210ENST00000588229 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
TRMT1-210ENST00000588229 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
TRMT1-210ENST00000588229 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
TRMT1-210ENST00000588229 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
TRMT1-210ENST00000588229 CFTRP13569 1480 aa20.97■□□□□ 0.95
TRMT1-210ENST00000588229 WIZO95785 1651 aa20.93■□□□□ 0.94
TRMT1-210ENST00000588229 CHD1O14646 1710 aa20.9■□□□□ 0.94
TRMT1-210ENST00000588229 IFT140Q96RY7 1462 aa20.89■□□□□ 0.94
TRMT1-210ENST00000588229 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
TRMT1-210ENST00000588229 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
TRMT1-210ENST00000588229 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
TRMT1-210ENST00000588229 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
TRMT1-210ENST00000588229 FBLN2P98095 1184 aa20.72■□□□□ 0.91
TRMT1-210ENST00000588229 TOPBP1Q92547 1522 aa20.7■□□□□ 0.9
TRMT1-210ENST00000588229 ILDR1Q86SU0 546 aaPredicted RBP20.7■□□□□ 0.9
TRMT1-210ENST00000588229 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.91e-6■■■■■ 33.8
TRMT1-210ENST00000588229 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
TRMT1-210ENST00000588229 CCDC88BA6NC98 1476 aa20.65■□□□□ 0.9
TRMT1-210ENST00000588229 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
TRMT1-210ENST00000588229 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
TRMT1-210ENST00000588229 PPARGC1BQ86YN6 1023 aaKnown RBP20.55■□□□□ 0.88
TRMT1-210ENST00000588229 EEA1Q15075 1411 aa20.54■□□□□ 0.88
TRMT1-210ENST00000588229 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
TRMT1-210ENST00000588229 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
TRMT1-210ENST00000588229 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
TRMT1-210ENST00000588229 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
TRMT1-210ENST00000588229 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
TRMT1-210ENST00000588229 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
TRMT1-210ENST00000588229 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
TRMT1-210ENST00000588229 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
TRMT1-210ENST00000588229 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
TRMT1-210ENST00000588229 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.85
TRMT1-210ENST00000588229 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
TRMT1-210ENST00000588229 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
TRMT1-210ENST00000588229 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
TRMT1-210ENST00000588229 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
TRMT1-210ENST00000588229 KIF13AQ9H1H9 1805 aa20.3■□□□□ 0.84
TRMT1-210ENST00000588229 KDM4FA0A1W2PPD8 638 aa20.3■□□□□ 0.84
TRMT1-210ENST00000588229 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
TRMT1-210ENST00000588229 SOGA1O94964 1423 aa20.27■□□□□ 0.84
TRMT1-210ENST00000588229 SYNJ2O15056 1496 aa20.27■□□□□ 0.84
TRMT1-210ENST00000588229 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
TRMT1-210ENST00000588229 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
TRMT1-210ENST00000588229 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
TRMT1-210ENST00000588229 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms