RNA–Protein interactions for RNA: ENST00000588164.2

LAMA3-209, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-209ENST00000588164 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
LAMA3-209ENST00000588164 NISCHQ9Y2I1 1504 aa17.67■□□□□ 0.42
LAMA3-209ENST00000588164 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
LAMA3-209ENST00000588164 ABCC9O60706 1549 aa16.61■□□□□ 0.25
LAMA3-209ENST00000588164 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
LAMA3-209ENST00000588164 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
LAMA3-209ENST00000588164 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
LAMA3-209ENST00000588164 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
LAMA3-209ENST00000588164 NACADO15069 1562 aa15.45■□□□□ 0.06
LAMA3-209ENST00000588164 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
LAMA3-209ENST00000588164 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
LAMA3-209ENST00000588164 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
LAMA3-209ENST00000588164 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
LAMA3-209ENST00000588164 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
LAMA3-209ENST00000588164 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
LAMA3-209ENST00000588164 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
LAMA3-209ENST00000588164 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
LAMA3-209ENST00000588164 CECR2Q9BXF3 1484 aa15.08■□□□□ 0.01
LAMA3-209ENST00000588164 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
LAMA3-209ENST00000588164 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
LAMA3-209ENST00000588164 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
LAMA3-209ENST00000588164 CUX2O14529 1486 aa14.71□□□□□ -0.05
LAMA3-209ENST00000588164 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
LAMA3-209ENST00000588164 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
LAMA3-209ENST00000588164 FOXD1Q16676 465 aa14.54□□□□□ -0.08
LAMA3-209ENST00000588164 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
LAMA3-209ENST00000588164 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
LAMA3-209ENST00000588164 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
LAMA3-209ENST00000588164 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
LAMA3-209ENST00000588164 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
LAMA3-209ENST00000588164 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
LAMA3-209ENST00000588164 NESP48681 1621 aa14.1□□□□□ -0.15
LAMA3-209ENST00000588164 MSH5O43196 834 aa14.07□□□□□ -0.16
LAMA3-209ENST00000588164 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
LAMA3-209ENST00000588164 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
LAMA3-209ENST00000588164 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
LAMA3-209ENST00000588164 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
LAMA3-209ENST00000588164 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
LAMA3-209ENST00000588164 SMARCA4P51532 1647 aa13.93□□□□□ -0.18
LAMA3-209ENST00000588164 PDS5BQ9NTI5 1447 aa13.92□□□□□ -0.18
LAMA3-209ENST00000588164 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
LAMA3-209ENST00000588164 WDR62O43379 1518 aa13.88□□□□□ -0.19
LAMA3-209ENST00000588164 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
LAMA3-209ENST00000588164 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
LAMA3-209ENST00000588164 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
LAMA3-209ENST00000588164 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
LAMA3-209ENST00000588164 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
LAMA3-209ENST00000588164 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
LAMA3-209ENST00000588164 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
LAMA3-209ENST00000588164 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
LAMA3-209ENST00000588164 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
LAMA3-209ENST00000588164 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
LAMA3-209ENST00000588164 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
LAMA3-209ENST00000588164 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
LAMA3-209ENST00000588164 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
LAMA3-209ENST00000588164 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
LAMA3-209ENST00000588164 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
LAMA3-209ENST00000588164 CFTRP13569 1480 aa13.47□□□□□ -0.25
LAMA3-209ENST00000588164 ARAP1Q96P48 1450 aa13.47□□□□□ -0.25
LAMA3-209ENST00000588164 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.25
LAMA3-209ENST00000588164 PRDM2Q13029 1718 aa13.44□□□□□ -0.26
LAMA3-209ENST00000588164 RSF1Q96T23 1441 aaPredicted RBP13.42□□□□□ -0.26
LAMA3-209ENST00000588164 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
LAMA3-209ENST00000588164 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
LAMA3-209ENST00000588164 CHD1O14646 1710 aa13.42□□□□□ -0.26
LAMA3-209ENST00000588164 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
LAMA3-209ENST00000588164 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
LAMA3-209ENST00000588164 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
LAMA3-209ENST00000588164 WIZO95785 1651 aa13.38□□□□□ -0.27
LAMA3-209ENST00000588164 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
LAMA3-209ENST00000588164 ADRA2BP18089 450 aa13.3□□□□□ -0.28
LAMA3-209ENST00000588164 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
LAMA3-209ENST00000588164 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
LAMA3-209ENST00000588164 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
LAMA3-209ENST00000588164 TARBP1Q13395 1621 aaKnown RBP13.23□□□□□ -0.29
LAMA3-209ENST00000588164 TOP2AP11388 1531 aaKnown RBP13.22□□□□□ -0.29
LAMA3-209ENST00000588164 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
LAMA3-209ENST00000588164 SYNJ1O43426 1573 aa13.17□□□□□ -0.3
LAMA3-209ENST00000588164 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
LAMA3-209ENST00000588164 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.3
LAMA3-209ENST00000588164 FBLN2P98095 1184 aa13.11□□□□□ -0.31
LAMA3-209ENST00000588164 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
LAMA3-209ENST00000588164 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
LAMA3-209ENST00000588164 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
LAMA3-209ENST00000588164 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
LAMA3-209ENST00000588164 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
LAMA3-209ENST00000588164 KIF13AQ9H1H9 1805 aa13.05□□□□□ -0.32
LAMA3-209ENST00000588164 SYNJ2O15056 1496 aa13.02□□□□□ -0.33
LAMA3-209ENST00000588164 CCDC88BA6NC98 1476 aa12.99□□□□□ -0.33
LAMA3-209ENST00000588164 CHMP7Q8WUX9 453 aaPredicted RBP12.98□□□□□ -0.33
LAMA3-209ENST00000588164 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
LAMA3-209ENST00000588164 RAD54L2Q9Y4B4 1467 aa12.96□□□□□ -0.34
LAMA3-209ENST00000588164 SOGA1O94964 1423 aa12.96□□□□□ -0.34
LAMA3-209ENST00000588164 PBRM1Q86U86 1689 aa12.96□□□□□ -0.34
LAMA3-209ENST00000588164 TDRD9Q8NDG6 1382 aaKnown RBP12.95□□□□□ -0.34
LAMA3-209ENST00000588164 KCNA4P22459 653 aa12.93□□□□□ -0.34
LAMA3-209ENST00000588164 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
LAMA3-209ENST00000588164 ERCC6L2Q5T890 1561 aa12.89□□□□□ -0.35
LAMA3-209ENST00000588164 SHROOM2Q13796 1616 aa12.88□□□□□ -0.35
LAMA3-209ENST00000588164 KDM4FA0A1W2PPD8 638 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms