RNA–Protein interactions for RNA: ENST00000588119.1

ZNF397-205, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-205ENST00000588119 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
ZNF397-205ENST00000588119 CHIC1Q5VXU3 224 aa13.13□□□□□ -0.31
ZNF397-205ENST00000588119 NISCHQ9Y2I1 1504 aa12.34□□□□□ -0.43
ZNF397-205ENST00000588119 SENP3Q9H4L4 574 aaPredicted RBP11.56□□□□□ -0.56
ZNF397-205ENST00000588119 ABCC9O60706 1549 aa11.55□□□□□ -0.56
ZNF397-205ENST00000588119 PHF23Q9BUL5 403 aaPredicted RBP11.51□□□□□ -0.57
ZNF397-205ENST00000588119 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
ZNF397-205ENST00000588119 DNAJC5BQ9UF47 199 aa11.17□□□□□ -0.62
ZNF397-205ENST00000588119 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
ZNF397-205ENST00000588119 NACADO15069 1562 aa10.79□□□□□ -0.68
ZNF397-205ENST00000588119 FOXD1Q16676 465 aa10.73□□□□□ -0.69
ZNF397-205ENST00000588119 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
ZNF397-205ENST00000588119 UNC13AQ9UPW8 1703 aa10.67□□□□□ -0.7
ZNF397-205ENST00000588119 DNAJC5Q9H3Z4 198 aa10.66□□□□□ -0.7
ZNF397-205ENST00000588119 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
ZNF397-205ENST00000588119 PLPPR3Q6T4P5 718 aa10.56□□□□□ -0.72
ZNF397-205ENST00000588119 MYO15BQ96JP2 1530 aa10.56□□□□□ -0.72
ZNF397-205ENST00000588119 DCAF8L2P0C7V8 631 aa10.52□□□□□ -0.73
ZNF397-205ENST00000588119 SHROOM4Q9ULL8 1493 aa10.52□□□□□ -0.73
ZNF397-205ENST00000588119 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
ZNF397-205ENST00000588119 CC2D2AQ9P2K1 1620 aa10.47□□□□□ -0.73
ZNF397-205ENST00000588119 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
ZNF397-205ENST00000588119 DCAF1Q9Y4B6 1507 aa10.25□□□□□ -0.77
ZNF397-205ENST00000588119 CUX2O14529 1486 aa10.23□□□□□ -0.77
ZNF397-205ENST00000588119 PPP6R1Q9UPN7 881 aa10.18□□□□□ -0.78
ZNF397-205ENST00000588119 SCRIBQ14160 1630 aa10.15□□□□□ -0.79
ZNF397-205ENST00000588119 ZCCHC6Q5VYS8 1495 aaKnown RBP10.12□□□□□ -0.79
ZNF397-205ENST00000588119 ADRA2BP18089 450 aa10.12□□□□□ -0.79
ZNF397-205ENST00000588119 ERCC6Q03468 1493 aa10.05□□□□□ -0.8
ZNF397-205ENST00000588119 PIAS4Q8N2W9 510 aaPredicted RBP10.03□□□□□ -0.8
ZNF397-205ENST00000588119 MSH5O43196 834 aa9.97□□□□□ -0.81
ZNF397-205ENST00000588119 NCAPD3P42695 1498 aa9.95□□□□□ -0.82
ZNF397-205ENST00000588119 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
ZNF397-205ENST00000588119 HMGXB3Q12766 1538 aa9.83□□□□□ -0.84
ZNF397-205ENST00000588119 THOC2Q8NI27 1593 aaKnown RBP9.83□□□□□ -0.84
ZNF397-205ENST00000588119 SMARCA2P51531 1590 aa9.81□□□□□ -0.84
ZNF397-205ENST00000588119 ATAD2BQ9ULI0 1458 aa9.81□□□□□ -0.84
ZNF397-205ENST00000588119 LAMC3Q9Y6N6 1575 aa9.8□□□□□ -0.84
ZNF397-205ENST00000588119 NESP48681 1621 aa9.78□□□□□ -0.84
ZNF397-205ENST00000588119 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
ZNF397-205ENST00000588119 KIF21AQ7Z4S6 1674 aa9.71□□□□□ -0.85
ZNF397-205ENST00000588119 OSCARQ8IYS5 282 aa9.71□□□□□ -0.86
ZNF397-205ENST00000588119 SMARCA4P51532 1647 aa9.7□□□□□ -0.86
ZNF397-205ENST00000588119 BAZ1BQ9UIG0 1483 aaKnown RBP9.69□□□□□ -0.86
ZNF397-205ENST00000588119 PEG3Q9GZU2 1588 aa9.67□□□□□ -0.86
ZNF397-205ENST00000588119 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
ZNF397-205ENST00000588119 WDR62O43379 1518 aa9.63□□□□□ -0.87
ZNF397-205ENST00000588119 MRC2Q9UBG0 1479 aa9.63□□□□□ -0.87
ZNF397-205ENST00000588119 CADPSQ9ULU8 1353 aa9.61□□□□□ -0.87
ZNF397-205ENST00000588119 POTEDQ86YR6 584 aa9.56□□□□□ -0.88
ZNF397-205ENST00000588119 RIMBP3CA6NJZ7 1639 aa9.55□□□□□ -0.88
ZNF397-205ENST00000588119 RIMBP3BA6NNM3 1639 aa9.55□□□□□ -0.88
ZNF397-205ENST00000588119 RIMBP3Q9UFD9 1639 aa9.55□□□□□ -0.88
ZNF397-205ENST00000588119 CEP164Q9UPV0 1460 aa9.52□□□□□ -0.89
ZNF397-205ENST00000588119 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
ZNF397-205ENST00000588119 FANCD2Q9BXW9 1451 aa9.47□□□□□ -0.89
ZNF397-205ENST00000588119 TRHP20396 242 aaPredicted RBP9.46□□□□□ -0.9
ZNF397-205ENST00000588119 CYB5RLQ6IPT4 315 aa9.44□□□□□ -0.9
ZNF397-205ENST00000588119 MROH2BQ7Z745 1585 aa9.44□□□□□ -0.9
ZNF397-205ENST00000588119 CFTRP13569 1480 aa9.41□□□□□ -0.9
ZNF397-205ENST00000588119 URB2Q14146 1524 aaKnown RBP9.37□□□□□ -0.91
ZNF397-205ENST00000588119 IFT140Q96RY7 1462 aa9.36□□□□□ -0.91
ZNF397-205ENST00000588119 RSF1Q96T23 1441 aaPredicted RBP9.36□□□□□ -0.91
ZNF397-205ENST00000588119 PRDM2Q13029 1718 aa9.34□□□□□ -0.91
ZNF397-205ENST00000588119 ARAP1Q96P48 1450 aa9.33□□□□□ -0.92
ZNF397-205ENST00000588119 WIZO95785 1651 aa9.32□□□□□ -0.92
ZNF397-205ENST00000588119 ABCC8Q09428 1581 aa9.31□□□□□ -0.92
ZNF397-205ENST00000588119 ZNF608Q9ULD9 1512 aaPredicted RBP9.3□□□□□ -0.92
ZNF397-205ENST00000588119 CHD1O14646 1710 aa9.29□□□□□ -0.92
ZNF397-205ENST00000588119 SCAF1Q9H7N4 1312 aaKnown RBP9.28□□□□□ -0.92
ZNF397-205ENST00000588119 EIF4G3O43432 1585 aaKnown RBP9.27□□□□□ -0.93
ZNF397-205ENST00000588119 PPP4R3CPQ6ZMV5 832 aa9.26□□□□□ -0.93
ZNF397-205ENST00000588119 TOPBP1Q92547 1522 aa9.23□□□□□ -0.93
ZNF397-205ENST00000588119 DMRT2Q9Y5R5 561 aa9.22□□□□□ -0.93
ZNF397-205ENST00000588119 FBLN2P98095 1184 aa9.21□□□□□ -0.94
ZNF397-205ENST00000588119 MAPK8IP2Q13387 824 aaPredicted RBP9.21□□□□□ -0.94
ZNF397-205ENST00000588119 TOP2AP11388 1531 aaKnown RBP9.21□□□□□ -0.94
ZNF397-205ENST00000588119 TARBP1Q13395 1621 aaKnown RBP9.2□□□□□ -0.94
ZNF397-205ENST00000588119 DNMBPQ6XZF7 1577 aa9.19□□□□□ -0.94
ZNF397-205ENST00000588119 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
ZNF397-205ENST00000588119 AQRO60306 1485 aaKnown RBP eCLIP9.18□□□□□ -0.94
ZNF397-205ENST00000588119 SYNJ1O43426 1573 aa9.17□□□□□ -0.94
ZNF397-205ENST00000588119 CLASP1Q7Z460 1538 aa9.17□□□□□ -0.94
ZNF397-205ENST00000588119 CHMP7Q8WUX9 453 aaPredicted RBP9.14□□□□□ -0.95
ZNF397-205ENST00000588119 MAGI1Q96QZ7 1491 aaPredicted RBP9.13□□□□□ -0.95
ZNF397-205ENST00000588119 GAPVD1Q14C86 1478 aa9.11□□□□□ -0.95
ZNF397-205ENST00000588119 POLA1P09884 1462 aaPredicted RBP9.1□□□□□ -0.95
ZNF397-205ENST00000588119 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
ZNF397-205ENST00000588119 CCDC88BA6NC98 1476 aa9.09□□□□□ -0.95
ZNF397-205ENST00000588119 SYNJ2O15056 1496 aa9.08□□□□□ -0.96
ZNF397-205ENST00000588119 SOGA1O94964 1423 aa9.08□□□□□ -0.96
ZNF397-205ENST00000588119 SNAPC4Q5SXM2 1469 aa9.08□□□□□ -0.96
ZNF397-205ENST00000588119 CNKSR2Q8WXI2 1034 aa9.07□□□□□ -0.96
ZNF397-205ENST00000588119 TDRD9Q8NDG6 1382 aaKnown RBP9.07□□□□□ -0.96
ZNF397-205ENST00000588119 GRIN2BQ13224 1484 aa9.06□□□□□ -0.96
ZNF397-205ENST00000588119 KIF13AQ9H1H9 1805 aa9.05□□□□□ -0.96
ZNF397-205ENST00000588119 RAD54L2Q9Y4B4 1467 aa9.03□□□□□ -0.96
ZNF397-205ENST00000588119 HOXD11P31277 338 aaPredicted RBP8.99□□□□□ -0.97
ZNF397-205ENST00000588119 PBRM1Q86U86 1689 aa8.99□□□□□ -0.97
ZNF397-205ENST00000588119 FGD5Q6ZNL6 1462 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms