RNA–Protein interactions for RNA: ENST00000588098.1

ITGA2B-203, Transcript of integrin subunit alpha 2b, humanhuman

TSL 3

Gene ITGA2B, Length 281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA2B-203ENST00000588098 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
ITGA2B-203ENST00000588098 ABCC9O60706 1549 aa22.73■■□□□ 1.23
ITGA2B-203ENST00000588098 CCDC180Q9P1Z9 1646 aa22.15■■□□□ 1.14
ITGA2B-203ENST00000588098 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
ITGA2B-203ENST00000588098 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
ITGA2B-203ENST00000588098 NACADO15069 1562 aa21.08■□□□□ 0.97
ITGA2B-203ENST00000588098 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
ITGA2B-203ENST00000588098 UNC13AQ9UPW8 1703 aa20.83■□□□□ 0.92
ITGA2B-203ENST00000588098 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
ITGA2B-203ENST00000588098 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
ITGA2B-203ENST00000588098 MYO15BQ96JP2 1530 aa20.62■□□□□ 0.89
ITGA2B-203ENST00000588098 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
ITGA2B-203ENST00000588098 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
ITGA2B-203ENST00000588098 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
ITGA2B-203ENST00000588098 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
ITGA2B-203ENST00000588098 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
ITGA2B-203ENST00000588098 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
ITGA2B-203ENST00000588098 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
ITGA2B-203ENST00000588098 ZCCHC6Q5VYS8 1495 aaKnown RBP20.09■□□□□ 0.81
ITGA2B-203ENST00000588098 CUX2O14529 1486 aa19.88■□□□□ 0.77
ITGA2B-203ENST00000588098 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
ITGA2B-203ENST00000588098 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
ITGA2B-203ENST00000588098 NESP48681 1621 aa19.35■□□□□ 0.69
ITGA2B-203ENST00000588098 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
ITGA2B-203ENST00000588098 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
ITGA2B-203ENST00000588098 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
ITGA2B-203ENST00000588098 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
ITGA2B-203ENST00000588098 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
ITGA2B-203ENST00000588098 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
ITGA2B-203ENST00000588098 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
ITGA2B-203ENST00000588098 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
ITGA2B-203ENST00000588098 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
ITGA2B-203ENST00000588098 PDS5BQ9NTI5 1447 aa19.03■□□□□ 0.64
ITGA2B-203ENST00000588098 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
ITGA2B-203ENST00000588098 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
ITGA2B-203ENST00000588098 MRC2Q9UBG0 1479 aa18.93■□□□□ 0.62
ITGA2B-203ENST00000588098 WDR62O43379 1518 aa18.91■□□□□ 0.62
ITGA2B-203ENST00000588098 CADPSQ9ULU8 1353 aa18.83■□□□□ 0.61
ITGA2B-203ENST00000588098 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
ITGA2B-203ENST00000588098 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
ITGA2B-203ENST00000588098 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
ITGA2B-203ENST00000588098 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
ITGA2B-203ENST00000588098 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
ITGA2B-203ENST00000588098 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
ITGA2B-203ENST00000588098 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
ITGA2B-203ENST00000588098 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
ITGA2B-203ENST00000588098 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
ITGA2B-203ENST00000588098 CFTRP13569 1480 aa18.51■□□□□ 0.55
ITGA2B-203ENST00000588098 WIZO95785 1651 aa18.47■□□□□ 0.55
ITGA2B-203ENST00000588098 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
ITGA2B-203ENST00000588098 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
ITGA2B-203ENST00000588098 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
ITGA2B-203ENST00000588098 IFT140Q96RY7 1462 aa18.37■□□□□ 0.53
ITGA2B-203ENST00000588098 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
ITGA2B-203ENST00000588098 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
ITGA2B-203ENST00000588098 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
ITGA2B-203ENST00000588098 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
ITGA2B-203ENST00000588098 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
ITGA2B-203ENST00000588098 PRDM2Q13029 1718 aa18.21■□□□□ 0.51
ITGA2B-203ENST00000588098 TOPBP1Q92547 1522 aa18.21■□□□□ 0.51
ITGA2B-203ENST00000588098 CHD1O14646 1710 aa18.2■□□□□ 0.5
ITGA2B-203ENST00000588098 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
ITGA2B-203ENST00000588098 ABCC8Q09428 1581 aa18.12■□□□□ 0.49
ITGA2B-203ENST00000588098 TARBP1Q13395 1621 aaKnown RBP18.1■□□□□ 0.49
ITGA2B-203ENST00000588098 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
ITGA2B-203ENST00000588098 FBLN2P98095 1184 aa18.08■□□□□ 0.48
ITGA2B-203ENST00000588098 CLASP1Q7Z460 1538 aa18.05■□□□□ 0.48
ITGA2B-203ENST00000588098 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
ITGA2B-203ENST00000588098 POLA1P09884 1462 aaPredicted RBP17.99■□□□□ 0.47
ITGA2B-203ENST00000588098 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
ITGA2B-203ENST00000588098 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
ITGA2B-203ENST00000588098 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
ITGA2B-203ENST00000588098 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
ITGA2B-203ENST00000588098 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
ITGA2B-203ENST00000588098 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
ITGA2B-203ENST00000588098 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
ITGA2B-203ENST00000588098 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
ITGA2B-203ENST00000588098 SOGA1O94964 1423 aa17.86■□□□□ 0.45
ITGA2B-203ENST00000588098 SYNJ2O15056 1496 aa17.83■□□□□ 0.45
ITGA2B-203ENST00000588098 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
ITGA2B-203ENST00000588098 FGD5Q6ZNL6 1462 aa17.78■□□□□ 0.44
ITGA2B-203ENST00000588098 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
ITGA2B-203ENST00000588098 CUX1P39880 1505 aa17.67■□□□□ 0.42
ITGA2B-203ENST00000588098 PBRM1Q86U86 1689 aa17.66■□□□□ 0.42
ITGA2B-203ENST00000588098 ILDR1Q86SU0 546 aaPredicted RBP17.63■□□□□ 0.41
ITGA2B-203ENST00000588098 KIF13AQ9H1H9 1805 aa17.61■□□□□ 0.41
ITGA2B-203ENST00000588098 CEP170Q5SW79 1584 aa17.61■□□□□ 0.41
ITGA2B-203ENST00000588098 ABCA5Q8WWZ7 1642 aa17.59■□□□□ 0.41
ITGA2B-203ENST00000588098 GRIN2AQ12879 1464 aa17.59■□□□□ 0.41
ITGA2B-203ENST00000588098 NUP160Q12769 1436 aa17.56■□□□□ 0.4
ITGA2B-203ENST00000588098 SHROOM2Q13796 1616 aa17.55■□□□□ 0.4
ITGA2B-203ENST00000588098 ABCA10Q8WWZ4 1543 aa17.55■□□□□ 0.4
ITGA2B-203ENST00000588098 KDM4FA0A1W2PPD8 638 aa17.52■□□□□ 0.4
ITGA2B-203ENST00000588098 ADAMTS12P58397 1594 aa17.52■□□□□ 0.39
ITGA2B-203ENST00000588098 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
ITGA2B-203ENST00000588098 FAM69CQ0P6D2 419 aa17.44■□□□□ 0.38
ITGA2B-203ENST00000588098 DIP2BQ9P265 1576 aa17.44■□□□□ 0.38
ITGA2B-203ENST00000588098 MAPKBP1O60336 1514 aa17.43■□□□□ 0.38
ITGA2B-203ENST00000588098 KDM6BO15054 1643 aa17.43■□□□□ 0.38
ITGA2B-203ENST00000588098 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms