RNA–Protein interactions for RNA: ENST00000588037.1

GFAP-211, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-211ENST00000588037 NISCHQ9Y2I1 1504 aa35.82■■■■□ 3.32
GFAP-211ENST00000588037 ABCC9O60706 1549 aa32.47■■■□□ 2.79
GFAP-211ENST00000588037 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
GFAP-211ENST00000588037 RB1CC1Q8TDY2 1594 aa30.89■■■□□ 2.54
GFAP-211ENST00000588037 DNAJC5BQ9UF47 199 aa30.68■■■□□ 2.5
GFAP-211ENST00000588037 NACADO15069 1562 aa30.62■■■□□ 2.49
GFAP-211ENST00000588037 UNC13AQ9UPW8 1703 aa30.26■■■□□ 2.43
GFAP-211ENST00000588037 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
GFAP-211ENST00000588037 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
GFAP-211ENST00000588037 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.41
GFAP-211ENST00000588037 BICRAQ9NZM4 1560 aa29.99■■■□□ 2.39
GFAP-211ENST00000588037 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
GFAP-211ENST00000588037 ZCCHC6Q5VYS8 1495 aaKnown RBP29.65■■■□□ 2.34
GFAP-211ENST00000588037 DCAF1Q9Y4B6 1507 aa29.65■■■□□ 2.34
GFAP-211ENST00000588037 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
GFAP-211ENST00000588037 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
GFAP-211ENST00000588037 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
GFAP-211ENST00000588037 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
GFAP-211ENST00000588037 DNAJC5Q9H3Z4 198 aa28.44■■■□□ 2.14
GFAP-211ENST00000588037 NCAPD3P42695 1498 aa28.24■■■□□ 2.11
GFAP-211ENST00000588037 CUX2O14529 1486 aa28.22■■■□□ 2.11
GFAP-211ENST00000588037 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
GFAP-211ENST00000588037 ATAD2BQ9ULI0 1458 aa28.09■■■□□ 2.09
GFAP-211ENST00000588037 HMGXB3Q12766 1538 aa28.06■■■□□ 2.08
GFAP-211ENST00000588037 SMARCA2P51531 1590 aa28.05■■■□□ 2.08
GFAP-211ENST00000588037 SMARCA4P51532 1647 aa28.03■■■□□ 2.08
GFAP-211ENST00000588037 BAZ1AQ9NRL2 1556 aaPredicted RBP27.84■■■□□ 2.05
GFAP-211ENST00000588037 NESP48681 1621 aa27.82■■■□□ 2.04
GFAP-211ENST00000588037 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
GFAP-211ENST00000588037 BAZ1BQ9UIG0 1483 aaKnown RBP27.8■■■□□ 2.04
GFAP-211ENST00000588037 THOC2Q8NI27 1593 aaKnown RBP27.71■■■□□ 2.03
GFAP-211ENST00000588037 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
GFAP-211ENST00000588037 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
GFAP-211ENST00000588037 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
GFAP-211ENST00000588037 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
GFAP-211ENST00000588037 CADPSQ9ULU8 1353 aa27.33■■□□□ 1.97
GFAP-211ENST00000588037 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
GFAP-211ENST00000588037 WDR62O43379 1518 aa27.26■■□□□ 1.95
GFAP-211ENST00000588037 WIZO95785 1651 aa27.23■■□□□ 1.95
GFAP-211ENST00000588037 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
GFAP-211ENST00000588037 FANCD2Q9BXW9 1451 aa27.02■■□□□ 1.92
GFAP-211ENST00000588037 CFTRP13569 1480 aa26.99■■□□□ 1.91
GFAP-211ENST00000588037 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
GFAP-211ENST00000588037 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
GFAP-211ENST00000588037 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
GFAP-211ENST00000588037 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
GFAP-211ENST00000588037 URB2Q14146 1524 aaKnown RBP26.82■■□□□ 1.88
GFAP-211ENST00000588037 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
GFAP-211ENST00000588037 IFT140Q96RY7 1462 aa26.58■■□□□ 1.85
GFAP-211ENST00000588037 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
GFAP-211ENST00000588037 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
GFAP-211ENST00000588037 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
GFAP-211ENST00000588037 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
GFAP-211ENST00000588037 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
GFAP-211ENST00000588037 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
GFAP-211ENST00000588037 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
GFAP-211ENST00000588037 EIF4G3O43432 1585 aaKnown RBP26.43■■□□□ 1.82
GFAP-211ENST00000588037 ARHGEF11O15085 1522 aa26.42■■□□□ 1.82
GFAP-211ENST00000588037 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
GFAP-211ENST00000588037 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
GFAP-211ENST00000588037 CHD1O14646 1710 aa26.31■■□□□ 1.8
GFAP-211ENST00000588037 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.79
GFAP-211ENST00000588037 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
GFAP-211ENST00000588037 ARAP1Q96P48 1450 aa26.12■■□□□ 1.77
GFAP-211ENST00000588037 CYB5RLQ6IPT4 315 aa26.12■■□□□ 1.77
GFAP-211ENST00000588037 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
GFAP-211ENST00000588037 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
GFAP-211ENST00000588037 SOGA1O94964 1423 aa26.03■■□□□ 1.76
GFAP-211ENST00000588037 FBLN2P98095 1184 aa26.02■■□□□ 1.76
GFAP-211ENST00000588037 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
GFAP-211ENST00000588037 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
GFAP-211ENST00000588037 TDRD9Q8NDG6 1382 aaKnown RBP25.98■■□□□ 1.75
GFAP-211ENST00000588037 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
GFAP-211ENST00000588037 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
GFAP-211ENST00000588037 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
GFAP-211ENST00000588037 CUX1P39880 1505 aa25.92■■□□□ 1.74
GFAP-211ENST00000588037 TRHP20396 242 aaPredicted RBP25.9■■□□□ 1.74
GFAP-211ENST00000588037 GRIN2BQ13224 1484 aa25.89■■□□□ 1.73
GFAP-211ENST00000588037 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
GFAP-211ENST00000588037 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
GFAP-211ENST00000588037 CHMP7Q8WUX9 453 aaPredicted RBP25.83■■□□□ 1.73
GFAP-211ENST00000588037 GAPVD1Q14C86 1478 aa25.74■■□□□ 1.71
GFAP-211ENST00000588037 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
GFAP-211ENST00000588037 ABCA10Q8WWZ4 1543 aa25.71■■□□□ 1.71
GFAP-211ENST00000588037 GRIN2AQ12879 1464 aa25.56■■□□□ 1.68
GFAP-211ENST00000588037 ADAMTS12P58397 1594 aa25.55■■□□□ 1.68
GFAP-211ENST00000588037 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
GFAP-211ENST00000588037 NUP160Q12769 1436 aa25.5■■□□□ 1.67
GFAP-211ENST00000588037 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
GFAP-211ENST00000588037 ERCC6L2Q5T890 1561 aa25.49■■□□□ 1.67
GFAP-211ENST00000588037 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
GFAP-211ENST00000588037 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
GFAP-211ENST00000588037 SHROOM2Q13796 1616 aa25.47■■□□□ 1.67
GFAP-211ENST00000588037 FHAD1B1AJZ9 1412 aa25.42■■□□□ 1.66
GFAP-211ENST00000588037 ERICH3Q5RHP9 1530 aa25.4■■□□□ 1.66
GFAP-211ENST00000588037 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
GFAP-211ENST00000588037 KIF13AQ9H1H9 1805 aa25.31■■□□□ 1.64
GFAP-211ENST00000588037 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
GFAP-211ENST00000588037 PRG4Q92954 1404 aaPredicted RBP25.21■■□□□ 1.63
GFAP-211ENST00000588037 RUSC2Q8N2Y8 1516 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms