RNA–Protein interactions for RNA: ENST00000587997.6

GFAP-210, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 609 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-210ENST00000587997 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
GFAP-210ENST00000587997 CCDC180Q9P1Z9 1646 aa33.96■■■■□ 3.03
GFAP-210ENST00000587997 ABCC9O60706 1549 aa33.94■■■■□ 3.02
GFAP-210ENST00000587997 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.77
GFAP-210ENST00000587997 NACADO15069 1562 aa32.05■■■□□ 2.72
GFAP-210ENST00000587997 DCAF8L2P0C7V8 631 aa31.92■■■□□ 2.7
GFAP-210ENST00000587997 DNAJC5BQ9UF47 199 aa31.73■■■□□ 2.67
GFAP-210ENST00000587997 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
GFAP-210ENST00000587997 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.64
GFAP-210ENST00000587997 MYO15BQ96JP2 1530 aa31.51■■■□□ 2.63
GFAP-210ENST00000587997 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
GFAP-210ENST00000587997 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
GFAP-210ENST00000587997 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
GFAP-210ENST00000587997 SCRIBQ14160 1630 aa30.94■■■□□ 2.54
GFAP-210ENST00000587997 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.53
GFAP-210ENST00000587997 CC2D2AQ9P2K1 1620 aa30.68■■■□□ 2.5
GFAP-210ENST00000587997 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
GFAP-210ENST00000587997 CECR2Q9BXF3 1484 aa30.56■■■□□ 2.48
GFAP-210ENST00000587997 NCAPD3P42695 1498 aa29.51■■■□□ 2.31
GFAP-210ENST00000587997 SMARCA4P51532 1647 aa29.48■■■□□ 2.31
GFAP-210ENST00000587997 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
GFAP-210ENST00000587997 ATAD2BQ9ULI0 1458 aa29.43■■■□□ 2.3
GFAP-210ENST00000587997 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
GFAP-210ENST00000587997 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
GFAP-210ENST00000587997 BAZ1AQ9NRL2 1556 aaPredicted RBP29.31■■■□□ 2.28
GFAP-210ENST00000587997 CUX2O14529 1486 aa29.26■■■□□ 2.27
GFAP-210ENST00000587997 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
GFAP-210ENST00000587997 DNAJC5Q9H3Z4 198 aa29.21■■■□□ 2.27
GFAP-210ENST00000587997 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
GFAP-210ENST00000587997 NESP48681 1621 aa29.12■■■□□ 2.25
GFAP-210ENST00000587997 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
GFAP-210ENST00000587997 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
GFAP-210ENST00000587997 THOC2Q8NI27 1593 aaKnown RBP28.87■■■□□ 2.21
GFAP-210ENST00000587997 KIF21AQ7Z4S6 1674 aa28.86■■■□□ 2.21
GFAP-210ENST00000587997 WIZO95785 1651 aa28.77■■■□□ 2.2
GFAP-210ENST00000587997 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
GFAP-210ENST00000587997 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
GFAP-210ENST00000587997 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
GFAP-210ENST00000587997 WDR62O43379 1518 aa28.44■■■□□ 2.14
GFAP-210ENST00000587997 CEP164Q9UPV0 1460 aa28.42■■■□□ 2.14
GFAP-210ENST00000587997 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
GFAP-210ENST00000587997 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
GFAP-210ENST00000587997 FANCD2Q9BXW9 1451 aa28.35■■■□□ 2.13
GFAP-210ENST00000587997 CFTRP13569 1480 aa28.29■■■□□ 2.12
GFAP-210ENST00000587997 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
GFAP-210ENST00000587997 URB2Q14146 1524 aaKnown RBP28.1■■■□□ 2.09
GFAP-210ENST00000587997 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
GFAP-210ENST00000587997 CCDC88BA6NC98 1476 aa28.01■■■□□ 2.07
GFAP-210ENST00000587997 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
GFAP-210ENST00000587997 IFT140Q96RY7 1462 aa27.82■■■□□ 2.04
GFAP-210ENST00000587997 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
GFAP-210ENST00000587997 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
GFAP-210ENST00000587997 ZNF608Q9ULD9 1512 aaPredicted RBP27.75■■■□□ 2.03
GFAP-210ENST00000587997 DNMBPQ6XZF7 1577 aa27.74■■■□□ 2.03
GFAP-210ENST00000587997 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
GFAP-210ENST00000587997 RIMBP3CA6NJZ7 1639 aa27.61■■■□□ 2.01
GFAP-210ENST00000587997 RIMBP3BA6NNM3 1639 aa27.61■■■□□ 2.01
GFAP-210ENST00000587997 RIMBP3Q9UFD9 1639 aa27.61■■■□□ 2.01
GFAP-210ENST00000587997 TARBP1Q13395 1621 aaKnown RBP27.58■■■□□ 2.01
GFAP-210ENST00000587997 CHD1O14646 1710 aa27.55■■■□□ 2
GFAP-210ENST00000587997 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.99
GFAP-210ENST00000587997 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
GFAP-210ENST00000587997 ARHGEF11O15085 1522 aa27.47■■□□□ 1.99
GFAP-210ENST00000587997 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
GFAP-210ENST00000587997 FBLN2P98095 1184 aa27.41■■□□□ 1.98
GFAP-210ENST00000587997 SOGA1O94964 1423 aa27.39■■□□□ 1.97
GFAP-210ENST00000587997 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
GFAP-210ENST00000587997 WDR97A6NE52 1622 aa27.33■■□□□ 1.97
GFAP-210ENST00000587997 TDRD9Q8NDG6 1382 aaKnown RBP27.33■■□□□ 1.97
GFAP-210ENST00000587997 CUX1P39880 1505 aa27.31■■□□□ 1.96
GFAP-210ENST00000587997 CYB5RLQ6IPT4 315 aa27.26■■□□□ 1.95
GFAP-210ENST00000587997 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
GFAP-210ENST00000587997 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
GFAP-210ENST00000587997 PBRM1Q86U86 1689 aa27.19■■□□□ 1.94
GFAP-210ENST00000587997 GRIN2BQ13224 1484 aa27.18■■□□□ 1.94
GFAP-210ENST00000587997 ARAP1Q96P48 1450 aa27.18■■□□□ 1.94
GFAP-210ENST00000587997 MAGI1Q96QZ7 1491 aaPredicted RBP27.18■■□□□ 1.94
GFAP-210ENST00000587997 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
GFAP-210ENST00000587997 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
GFAP-210ENST00000587997 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
GFAP-210ENST00000587997 SYNJ2O15056 1496 aa27.08■■□□□ 1.93
GFAP-210ENST00000587997 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
GFAP-210ENST00000587997 TRHP20396 242 aaPredicted RBP27.05■■□□□ 1.92
GFAP-210ENST00000587997 ABCA5Q8WWZ7 1642 aa27.03■■□□□ 1.92
GFAP-210ENST00000587997 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
GFAP-210ENST00000587997 BIVM-ERCC5R4GMW8 1640 aa26.93■■□□□ 1.9
GFAP-210ENST00000587997 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
GFAP-210ENST00000587997 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
GFAP-210ENST00000587997 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
GFAP-210ENST00000587997 GRIN2AQ12879 1464 aa26.82■■□□□ 1.88
GFAP-210ENST00000587997 CEP170Q5SW79 1584 aa26.75■■□□□ 1.87
GFAP-210ENST00000587997 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
GFAP-210ENST00000587997 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
GFAP-210ENST00000587997 ERCC6L2Q5T890 1561 aa26.68■■□□□ 1.86
GFAP-210ENST00000587997 NUP160Q12769 1436 aa26.68■■□□□ 1.86
GFAP-210ENST00000587997 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
GFAP-210ENST00000587997 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
GFAP-210ENST00000587997 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
GFAP-210ENST00000587997 JPH4Q96JJ6 628 aa26.42■■□□□ 1.82
GFAP-210ENST00000587997 CUL7Q14999 1698 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms