RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-208ENST00000587987 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
U2AF1L4-208ENST00000587987 ABCC9O60706 1549 aa20.75■□□□□ 0.91
U2AF1L4-208ENST00000587987 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
U2AF1L4-208ENST00000587987 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
U2AF1L4-208ENST00000587987 RB1CC1Q8TDY2 1594 aa19.58■□□□□ 0.73
U2AF1L4-208ENST00000587987 NACADO15069 1562 aa19.36■□□□□ 0.69
U2AF1L4-208ENST00000587987 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
U2AF1L4-208ENST00000587987 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
U2AF1L4-208ENST00000587987 UNC13AQ9UPW8 1703 aa19.14■□□□□ 0.66
U2AF1L4-208ENST00000587987 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.63
U2AF1L4-208ENST00000587987 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
U2AF1L4-208ENST00000587987 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
U2AF1L4-208ENST00000587987 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
U2AF1L4-208ENST00000587987 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.58
U2AF1L4-208ENST00000587987 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
U2AF1L4-208ENST00000587987 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
U2AF1L4-208ENST00000587987 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
U2AF1L4-208ENST00000587987 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
U2AF1L4-208ENST00000587987 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
U2AF1L4-208ENST00000587987 CUX2O14529 1486 aa17.99■□□□□ 0.47
U2AF1L4-208ENST00000587987 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
U2AF1L4-208ENST00000587987 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
U2AF1L4-208ENST00000587987 ATAD2BQ9ULI0 1458 aa17.78■□□□□ 0.44
U2AF1L4-208ENST00000587987 NESP48681 1621 aa17.72■□□□□ 0.43
U2AF1L4-208ENST00000587987 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
U2AF1L4-208ENST00000587987 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
U2AF1L4-208ENST00000587987 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
U2AF1L4-208ENST00000587987 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
U2AF1L4-208ENST00000587987 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
U2AF1L4-208ENST00000587987 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
U2AF1L4-208ENST00000587987 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
U2AF1L4-208ENST00000587987 KIF21AQ7Z4S6 1674 aa17.49■□□□□ 0.39
U2AF1L4-208ENST00000587987 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
U2AF1L4-208ENST00000587987 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
U2AF1L4-208ENST00000587987 PDS5BQ9NTI5 1447 aa17.44■□□□□ 0.38
U2AF1L4-208ENST00000587987 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
U2AF1L4-208ENST00000587987 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
U2AF1L4-208ENST00000587987 CADPSQ9ULU8 1353 aa17.3■□□□□ 0.36
U2AF1L4-208ENST00000587987 WDR62O43379 1518 aa17.28■□□□□ 0.36
U2AF1L4-208ENST00000587987 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
U2AF1L4-208ENST00000587987 WIZO95785 1651 aa17.19■□□□□ 0.34
U2AF1L4-208ENST00000587987 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
U2AF1L4-208ENST00000587987 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
U2AF1L4-208ENST00000587987 CFTRP13569 1480 aa17.04■□□□□ 0.32
U2AF1L4-208ENST00000587987 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
U2AF1L4-208ENST00000587987 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
U2AF1L4-208ENST00000587987 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.3
U2AF1L4-208ENST00000587987 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
U2AF1L4-208ENST00000587987 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
U2AF1L4-208ENST00000587987 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
U2AF1L4-208ENST00000587987 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
U2AF1L4-208ENST00000587987 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
U2AF1L4-208ENST00000587987 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
U2AF1L4-208ENST00000587987 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
U2AF1L4-208ENST00000587987 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
U2AF1L4-208ENST00000587987 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
U2AF1L4-208ENST00000587987 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.28
U2AF1L4-208ENST00000587987 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
U2AF1L4-208ENST00000587987 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
U2AF1L4-208ENST00000587987 CHD1O14646 1710 aa16.71■□□□□ 0.27
U2AF1L4-208ENST00000587987 ABCC8Q09428 1581 aa16.69■□□□□ 0.26
U2AF1L4-208ENST00000587987 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
U2AF1L4-208ENST00000587987 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
U2AF1L4-208ENST00000587987 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
U2AF1L4-208ENST00000587987 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
U2AF1L4-208ENST00000587987 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
U2AF1L4-208ENST00000587987 FBLN2P98095 1184 aa16.64■□□□□ 0.25
U2AF1L4-208ENST00000587987 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
U2AF1L4-208ENST00000587987 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
U2AF1L4-208ENST00000587987 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
U2AF1L4-208ENST00000587987 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
U2AF1L4-208ENST00000587987 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
U2AF1L4-208ENST00000587987 SOGA1O94964 1423 aa16.49■□□□□ 0.23
U2AF1L4-208ENST00000587987 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
U2AF1L4-208ENST00000587987 FGD5Q6ZNL6 1462 aa16.45■□□□□ 0.22
U2AF1L4-208ENST00000587987 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
U2AF1L4-208ENST00000587987 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
U2AF1L4-208ENST00000587987 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
U2AF1L4-208ENST00000587987 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
U2AF1L4-208ENST00000587987 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
U2AF1L4-208ENST00000587987 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
U2AF1L4-208ENST00000587987 CUX1P39880 1505 aa16.38■□□□□ 0.21
U2AF1L4-208ENST00000587987 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
U2AF1L4-208ENST00000587987 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
U2AF1L4-208ENST00000587987 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
U2AF1L4-208ENST00000587987 ERCC6L2Q5T890 1561 aa16.23■□□□□ 0.19
U2AF1L4-208ENST00000587987 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
U2AF1L4-208ENST00000587987 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
U2AF1L4-208ENST00000587987 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
U2AF1L4-208ENST00000587987 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
U2AF1L4-208ENST00000587987 NUP160Q12769 1436 aa16.13■□□□□ 0.17
U2AF1L4-208ENST00000587987 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
U2AF1L4-208ENST00000587987 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
U2AF1L4-208ENST00000587987 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.16
U2AF1L4-208ENST00000587987 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.16
U2AF1L4-208ENST00000587987 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.16
U2AF1L4-208ENST00000587987 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.16
U2AF1L4-208ENST00000587987 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
U2AF1L4-208ENST00000587987 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
U2AF1L4-208ENST00000587987 FAM69CQ0P6D2 419 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms