RNA–Protein interactions for RNA: ENST00000587977.5

RAD51D-213, Transcript of RAD51 paralog D, humanhuman

TSL 2

Gene RAD51D, Length 1,732 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-213ENST00000587977 NISCHQ9Y2I1 1504 aa48.57■■■■■ 5.37
RAD51D-213ENST00000587977 CCDC180Q9P1Z9 1646 aa43.23■■■■■ 4.51
RAD51D-213ENST00000587977 ABCC9O60706 1549 aa42.75■■■■■ 4.43
RAD51D-213ENST00000587977 RB1CC1Q8TDY2 1594 aa40.9■■■■■ 4.14
RAD51D-213ENST00000587977 DCAF8L2P0C7V8 631 aa40.79■■■■■ 4.12
RAD51D-213ENST00000587977 NACADO15069 1562 aa40.79■■■■■ 4.12
RAD51D-213ENST00000587977 MYO15BQ96JP2 1530 aa40.45■■■■■ 4.07
RAD51D-213ENST00000587977 ZCCHC6Q5VYS8 1495 aaKnown RBP40.37■■■■■ 4.05
RAD51D-213ENST00000587977 DCAF1Q9Y4B6 1507 aa40.15■■■■■ 4.02
RAD51D-213ENST00000587977 PABPN1Q86U42 306 aaKnown RBP eCLIP39.96■■■■□ 3.99
RAD51D-213ENST00000587977 UNC13AQ9UPW8 1703 aa39.95■■■■□ 3.99
RAD51D-213ENST00000587977 BICRAQ9NZM4 1560 aa39.74■■■■□ 3.95
RAD51D-213ENST00000587977 DNAJC5BQ9UF47 199 aa39.69■■■■□ 3.94
RAD51D-213ENST00000587977 SCRIBQ14160 1630 aa39.47■■■■□ 3.91
RAD51D-213ENST00000587977 SHROOM4Q9ULL8 1493 aa39.22■■■■□ 3.87
RAD51D-213ENST00000587977 EIF4G1Q04637 1599 aaKnown RBP38.69■■■■□ 3.78
RAD51D-213ENST00000587977 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.77
RAD51D-213ENST00000587977 CECR2Q9BXF3 1484 aa38.45■■■■□ 3.75
RAD51D-213ENST00000587977 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
RAD51D-213ENST00000587977 NCAPD3P42695 1498 aa37.71■■■■□ 3.63
RAD51D-213ENST00000587977 ATAD2BQ9ULI0 1458 aa37.67■■■■□ 3.62
RAD51D-213ENST00000587977 BAZ1AQ9NRL2 1556 aaPredicted RBP37.63■■■■□ 3.61
RAD51D-213ENST00000587977 SMARCA2P51531 1590 aa37.54■■■■□ 3.6
RAD51D-213ENST00000587977 MROH2BQ7Z745 1585 aa37.44■■■■□ 3.58
RAD51D-213ENST00000587977 HMGXB3Q12766 1538 aa37.42■■■■□ 3.58
RAD51D-213ENST00000587977 PEG3Q9GZU2 1588 aa37.37■■■■□ 3.57
RAD51D-213ENST00000587977 BAZ1BQ9UIG0 1483 aaKnown RBP37.29■■■■□ 3.56
RAD51D-213ENST00000587977 WIZO95785 1651 aa36.99■■■■□ 3.51
RAD51D-213ENST00000587977 RSF1Q96T23 1441 aaPredicted RBP36.92■■■■□ 3.5
RAD51D-213ENST00000587977 NESP48681 1621 aa36.91■■■■□ 3.5
RAD51D-213ENST00000587977 ERCC6Q03468 1493 aa36.84■■■■□ 3.49
RAD51D-213ENST00000587977 LAMC3Q9Y6N6 1575 aa36.7■■■■□ 3.47
RAD51D-213ENST00000587977 CADPSQ9ULU8 1353 aa36.6■■■■□ 3.45
RAD51D-213ENST00000587977 CUX2O14529 1486 aa36.58■■■■□ 3.45
RAD51D-213ENST00000587977 TOP2AP11388 1531 aaKnown RBP36.55■■■■□ 3.44
RAD51D-213ENST00000587977 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.43
RAD51D-213ENST00000587977 KIF21AQ7Z4S6 1674 aa36.37■■■■□ 3.41
RAD51D-213ENST00000587977 THOC2Q8NI27 1593 aaKnown RBP36.36■■■■□ 3.41
RAD51D-213ENST00000587977 CFTRP13569 1480 aa36.29■■■■□ 3.4
RAD51D-213ENST00000587977 CCDC88BA6NC98 1476 aa36.19■■■■□ 3.38
RAD51D-213ENST00000587977 FANCD2Q9BXW9 1451 aa36.14■■■■□ 3.38
RAD51D-213ENST00000587977 MRC2Q9UBG0 1479 aa36.13■■■■□ 3.37
RAD51D-213ENST00000587977 CEP164Q9UPV0 1460 aa36.1■■■■□ 3.37
RAD51D-213ENST00000587977 WDR62O43379 1518 aa36.01■■■■□ 3.36
RAD51D-213ENST00000587977 DNAJC5Q9H3Z4 198 aa35.98■■■■□ 3.35
RAD51D-213ENST00000587977 PRDM2Q13029 1718 aa35.83■■■■□ 3.33
RAD51D-213ENST00000587977 URB2Q14146 1524 aaKnown RBP35.82■■■■□ 3.32
RAD51D-213ENST00000587977 SUPT5HO00267 1087 aaKnown RBP35.74■■■■□ 3.31
RAD51D-213ENST00000587977 TOPBP1Q92547 1522 aa35.53■■■■□ 3.28
RAD51D-213ENST00000587977 ABCC8Q09428 1581 aa35.48■■■■□ 3.27
RAD51D-213ENST00000587977 DNMBPQ6XZF7 1577 aa35.42■■■■□ 3.26
RAD51D-213ENST00000587977 IFT140Q96RY7 1462 aa35.38■■■■□ 3.25
RAD51D-213ENST00000587977 ZNF608Q9ULD9 1512 aaPredicted RBP35.29■■■■□ 3.24
RAD51D-213ENST00000587977 POLA1P09884 1462 aaPredicted RBP35.2■■■■□ 3.23
RAD51D-213ENST00000587977 TARBP1Q13395 1621 aaKnown RBP35.14■■■■□ 3.22
RAD51D-213ENST00000587977 CUX1P39880 1505 aa35.13■■■■□ 3.21
RAD51D-213ENST00000587977 RAD54L2Q9Y4B4 1467 aa35.09■■■■□ 3.21
RAD51D-213ENST00000587977 OSCARQ8IYS5 282 aa35.09■■■■□ 3.21
RAD51D-213ENST00000587977 SOGA1O94964 1423 aa35.08■■■■□ 3.21
RAD51D-213ENST00000587977 AQRO60306 1485 aaKnown RBP eCLIP35.06■■■■□ 3.24e-7■■■■□ 26
RAD51D-213ENST00000587977 FGD5Q6ZNL6 1462 aa35.06■■■■□ 3.2
RAD51D-213ENST00000587977 EIF4G3O43432 1585 aaKnown RBP35.05■■■■□ 3.2
RAD51D-213ENST00000587977 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
RAD51D-213ENST00000587977 WDR97A6NE52 1622 aa34.79■■■■□ 3.16
RAD51D-213ENST00000587977 WRNQ14191 1432 aaPredicted RBP eCLIP34.78■■■■□ 3.165e-11■■■■■ 40
RAD51D-213ENST00000587977 FBLN2P98095 1184 aa34.71■■■■□ 3.15
RAD51D-213ENST00000587977 ABCA10Q8WWZ4 1543 aa34.7■■■■□ 3.15
RAD51D-213ENST00000587977 TOP2BQ02880 1626 aa34.7■■■■□ 3.15
RAD51D-213ENST00000587977 SYNJ1O43426 1573 aa34.69■■■■□ 3.14
RAD51D-213ENST00000587977 GRIN2BQ13224 1484 aa34.68■■■■□ 3.14
RAD51D-213ENST00000587977 SNAPC4Q5SXM2 1469 aa34.68■■■■□ 3.14
RAD51D-213ENST00000587977 BIVM-ERCC5R4GMW8 1640 aa34.67■■■■□ 3.14
RAD51D-213ENST00000587977 CHD1O14646 1710 aa34.65■■■■□ 3.14
RAD51D-213ENST00000587977 GAPVD1Q14C86 1478 aa34.64■■■■□ 3.14
RAD51D-213ENST00000587977 TRIM41Q8WV44 630 aa34.61■■■■□ 3.13
RAD51D-213ENST00000587977 MAGI1Q96QZ7 1491 aaPredicted RBP34.6■■■■□ 3.13
RAD51D-213ENST00000587977 CHMP7Q8WUX9 453 aaPredicted RBP34.56■■■■□ 3.12
RAD51D-213ENST00000587977 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
RAD51D-213ENST00000587977 PBRM1Q86U86 1689 aa34.5■■■■□ 3.11
RAD51D-213ENST00000587977 SYNJ2O15056 1496 aa34.49■■■■□ 3.11
RAD51D-213ENST00000587977 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
RAD51D-213ENST00000587977 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
RAD51D-213ENST00000587977 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
RAD51D-213ENST00000587977 ARHGEF11O15085 1522 aa34.45■■■■□ 3.11
RAD51D-213ENST00000587977 CLASP1Q7Z460 1538 aa34.33■■■■□ 3.09
RAD51D-213ENST00000587977 ERICH3Q5RHP9 1530 aa34.26■■■■□ 3.07
RAD51D-213ENST00000587977 ADAMTS12P58397 1594 aa34.24■■■■□ 3.07
RAD51D-213ENST00000587977 FHAD1B1AJZ9 1412 aa34.23■■■■□ 3.07
RAD51D-213ENST00000587977 CYB5RLQ6IPT4 315 aa34.23■■■■□ 3.07
RAD51D-213ENST00000587977 GRIN2AQ12879 1464 aa34.23■■■■□ 3.07
RAD51D-213ENST00000587977 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
RAD51D-213ENST00000587977 NUP160Q12769 1436 aa34.12■■■■□ 3.05
RAD51D-213ENST00000587977 KIF27Q86VH2 1401 aa34.07■■■■□ 3.04
RAD51D-213ENST00000587977 CEP170Q5SW79 1584 aa34.06■■■■□ 3.04
RAD51D-213ENST00000587977 IGF1RP08069 1367 aa34.06■■■■□ 3.04
RAD51D-213ENST00000587977 ERCC6L2Q5T890 1561 aa33.87■■■■□ 3.01
RAD51D-213ENST00000587977 SHROOM2Q13796 1616 aa33.84■■■■□ 3.01
RAD51D-213ENST00000587977 CUL7Q14999 1698 aa33.83■■■■□ 3.01
RAD51D-213ENST00000587977 JPH4Q96JJ6 628 aa33.82■■■■□ 3
RAD51D-213ENST00000587977 CARMIL1Q5VZK9 1371 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms