RNA–Protein interactions for RNA: ENST00000587958.1

GRN-210, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-210ENST00000587958 NISCHQ9Y2I1 1504 aa36.8■■■■□ 3.48
GRN-210ENST00000587958 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
GRN-210ENST00000587958 ABCC9O60706 1549 aa32.39■■■□□ 2.78
GRN-210ENST00000587958 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
GRN-210ENST00000587958 RB1CC1Q8TDY2 1594 aa30.89■■■□□ 2.54
GRN-210ENST00000587958 NACADO15069 1562 aa30.78■■■□□ 2.52
GRN-210ENST00000587958 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
GRN-210ENST00000587958 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
GRN-210ENST00000587958 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
GRN-210ENST00000587958 PABPN1Q86U42 306 aaKnown RBP eCLIP30.3■■■□□ 2.44
GRN-210ENST00000587958 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
GRN-210ENST00000587958 BICRAQ9NZM4 1560 aa30.12■■■□□ 2.41
GRN-210ENST00000587958 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
GRN-210ENST00000587958 DNAJC5BQ9UF47 199 aa30.02■■■□□ 2.4
GRN-210ENST00000587958 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
GRN-210ENST00000587958 EIF4G1Q04637 1599 aaKnown RBP29.27■■■□□ 2.28
GRN-210ENST00000587958 CC2D2AQ9P2K1 1620 aa29.25■■■□□ 2.27
GRN-210ENST00000587958 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
GRN-210ENST00000587958 SMARCA4P51532 1647 aa28.62■■■□□ 2.17
GRN-210ENST00000587958 ATAD2BQ9ULI0 1458 aa28.48■■■□□ 2.15
GRN-210ENST00000587958 MROH2BQ7Z745 1585 aa28.46■■■□□ 2.15
GRN-210ENST00000587958 BAZ1AQ9NRL2 1556 aaPredicted RBP28.46■■■□□ 2.15
GRN-210ENST00000587958 NCAPD3P42695 1498 aa28.43■■■□□ 2.14
GRN-210ENST00000587958 SMARCA2P51531 1590 aa28.35■■■□□ 2.13
GRN-210ENST00000587958 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
GRN-210ENST00000587958 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
GRN-210ENST00000587958 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
GRN-210ENST00000587958 WIZO95785 1651 aa28.19■■■□□ 2.1
GRN-210ENST00000587958 NESP48681 1621 aa28.03■■■□□ 2.08
GRN-210ENST00000587958 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.07
GRN-210ENST00000587958 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
GRN-210ENST00000587958 LAMC3Q9Y6N6 1575 aa27.71■■■□□ 2.03
GRN-210ENST00000587958 TOP2AP11388 1531 aaKnown RBP27.71■■■□□ 2.03
GRN-210ENST00000587958 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
GRN-210ENST00000587958 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
GRN-210ENST00000587958 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
GRN-210ENST00000587958 CUX2O14529 1486 aa27.49■■□□□ 1.99
GRN-210ENST00000587958 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
GRN-210ENST00000587958 CCDC88BA6NC98 1476 aa27.47■■□□□ 1.99
GRN-210ENST00000587958 CFTRP13569 1480 aa27.41■■□□□ 1.98
GRN-210ENST00000587958 FANCD2Q9BXW9 1451 aa27.35■■□□□ 1.97
GRN-210ENST00000587958 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
GRN-210ENST00000587958 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
GRN-210ENST00000587958 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
GRN-210ENST00000587958 PRDM2Q13029 1718 aa27.25■■□□□ 1.95
GRN-210ENST00000587958 WDR62O43379 1518 aa27.21■■□□□ 1.95
GRN-210ENST00000587958 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
GRN-210ENST00000587958 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
GRN-210ENST00000587958 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
GRN-210ENST00000587958 DNMBPQ6XZF7 1577 aa26.81■■□□□ 1.88
GRN-210ENST00000587958 ZNF608Q9ULD9 1512 aaPredicted RBP26.77■■□□□ 1.88
GRN-210ENST00000587958 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
GRN-210ENST00000587958 CUX1P39880 1505 aa26.69■■□□□ 1.86
GRN-210ENST00000587958 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
GRN-210ENST00000587958 POLA1P09884 1462 aaPredicted RBP26.66■■□□□ 1.86
GRN-210ENST00000587958 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
GRN-210ENST00000587958 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
GRN-210ENST00000587958 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
GRN-210ENST00000587958 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
GRN-210ENST00000587958 AQRO60306 1485 aaKnown RBP eCLIP26.57■■□□□ 1.842e-10■■■■■ 44.6
GRN-210ENST00000587958 SOGA1O94964 1423 aa26.54■■□□□ 1.84
GRN-210ENST00000587958 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
GRN-210ENST00000587958 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
GRN-210ENST00000587958 OSCARQ8IYS5 282 aa26.4■■□□□ 1.82
GRN-210ENST00000587958 WDR97A6NE52 1622 aa26.39■■□□□ 1.82
GRN-210ENST00000587958 CHD1O14646 1710 aa26.37■■□□□ 1.81
GRN-210ENST00000587958 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
GRN-210ENST00000587958 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
GRN-210ENST00000587958 TOP2BQ02880 1626 aa26.33■■□□□ 1.81
GRN-210ENST00000587958 FBLN2P98095 1184 aa26.29■■□□□ 1.8
GRN-210ENST00000587958 SNAPC4Q5SXM2 1469 aa26.27■■□□□ 1.8
GRN-210ENST00000587958 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
GRN-210ENST00000587958 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
GRN-210ENST00000587958 GAPVD1Q14C86 1478 aa26.22■■□□□ 1.79
GRN-210ENST00000587958 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
GRN-210ENST00000587958 GRIN2BQ13224 1484 aa26.19■■□□□ 1.78
GRN-210ENST00000587958 TRIM41Q8WV44 630 aa26.15■■□□□ 1.78
GRN-210ENST00000587958 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
GRN-210ENST00000587958 RIMBP3CA6NJZ7 1639 aa26.1■■□□□ 1.77
GRN-210ENST00000587958 RIMBP3BA6NNM3 1639 aa26.1■■□□□ 1.77
GRN-210ENST00000587958 RIMBP3Q9UFD9 1639 aa26.1■■□□□ 1.77
GRN-210ENST00000587958 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
GRN-210ENST00000587958 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
GRN-210ENST00000587958 ARHGEF11O15085 1522 aa26.03■■□□□ 1.76
GRN-210ENST00000587958 ADAMTS12P58397 1594 aa25.97■■□□□ 1.75
GRN-210ENST00000587958 CLASP1Q7Z460 1538 aa25.97■■□□□ 1.75
GRN-210ENST00000587958 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
GRN-210ENST00000587958 GRIN2AQ12879 1464 aa25.89■■□□□ 1.73
GRN-210ENST00000587958 CYB5RLQ6IPT4 315 aa25.86■■□□□ 1.73
GRN-210ENST00000587958 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
GRN-210ENST00000587958 FHAD1B1AJZ9 1412 aa25.85■■□□□ 1.73
GRN-210ENST00000587958 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
GRN-210ENST00000587958 IGF1RP08069 1367 aa25.78■■□□□ 1.72
GRN-210ENST00000587958 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
GRN-210ENST00000587958 NUP160Q12769 1436 aa25.76■■□□□ 1.71
GRN-210ENST00000587958 ERCC6L2Q5T890 1561 aa25.76■■□□□ 1.71
GRN-210ENST00000587958 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
GRN-210ENST00000587958 CUL7Q14999 1698 aa25.64■■□□□ 1.69
GRN-210ENST00000587958 SHROOM2Q13796 1616 aa25.63■■□□□ 1.69
GRN-210ENST00000587958 CARMIL1Q5VZK9 1371 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms