RNA–Protein interactions for RNA: ENST00000587883.5

JRK-206, Transcript of Jrk helix-turn-helix protein, humanhuman

TSL 2

Gene JRK, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-206ENST00000587883 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
JRK-206ENST00000587883 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
JRK-206ENST00000587883 ABCC9O60706 1549 aa33.01■■■□□ 2.87
JRK-206ENST00000587883 RB1CC1Q8TDY2 1594 aa31.5■■■□□ 2.63
JRK-206ENST00000587883 NACADO15069 1562 aa31.28■■■□□ 2.6
JRK-206ENST00000587883 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
JRK-206ENST00000587883 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
JRK-206ENST00000587883 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
JRK-206ENST00000587883 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
JRK-206ENST00000587883 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
JRK-206ENST00000587883 ZCCHC6Q5VYS8 1495 aaKnown RBP30.48■■■□□ 2.47
JRK-206ENST00000587883 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
JRK-206ENST00000587883 DCAF1Q9Y4B6 1507 aa30.45■■■□□ 2.47
JRK-206ENST00000587883 SHROOM4Q9ULL8 1493 aa30.21■■■□□ 2.43
JRK-206ENST00000587883 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
JRK-206ENST00000587883 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
JRK-206ENST00000587883 CECR2Q9BXF3 1484 aa29.77■■■□□ 2.36
JRK-206ENST00000587883 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
JRK-206ENST00000587883 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
JRK-206ENST00000587883 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
JRK-206ENST00000587883 SMARCA2P51531 1590 aa28.72■■■□□ 2.19
JRK-206ENST00000587883 SMARCA4P51532 1647 aa28.7■■■□□ 2.19
JRK-206ENST00000587883 HMGXB3Q12766 1538 aa28.64■■■□□ 2.18
JRK-206ENST00000587883 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
JRK-206ENST00000587883 ERCC6Q03468 1493 aa28.58■■■□□ 2.17
JRK-206ENST00000587883 CUX2O14529 1486 aa28.53■■■□□ 2.16
JRK-206ENST00000587883 DNAJC5Q9H3Z4 198 aa28.5■■■□□ 2.15
JRK-206ENST00000587883 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
JRK-206ENST00000587883 PEG3Q9GZU2 1588 aa28.44■■■□□ 2.14
JRK-206ENST00000587883 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
JRK-206ENST00000587883 NESP48681 1621 aa28.32■■■□□ 2.12
JRK-206ENST00000587883 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
JRK-206ENST00000587883 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
JRK-206ENST00000587883 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
JRK-206ENST00000587883 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
JRK-206ENST00000587883 WIZO95785 1651 aa27.97■■■□□ 2.07
JRK-206ENST00000587883 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
JRK-206ENST00000587883 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
JRK-206ENST00000587883 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
JRK-206ENST00000587883 WDR62O43379 1518 aa27.71■■■□□ 2.03
JRK-206ENST00000587883 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.03
JRK-206ENST00000587883 TOP2AP11388 1531 aaKnown RBP27.67■■■□□ 2.02
JRK-206ENST00000587883 CFTRP13569 1480 aa27.65■■■□□ 2.02
JRK-206ENST00000587883 FANCD2Q9BXW9 1451 aa27.65■■■□□ 2.02
JRK-206ENST00000587883 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
JRK-206ENST00000587883 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
JRK-206ENST00000587883 CCDC88BA6NC98 1476 aa27.34■■□□□ 1.97
JRK-206ENST00000587883 OSCARQ8IYS5 282 aa27.26■■□□□ 1.95
JRK-206ENST00000587883 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
JRK-206ENST00000587883 IFT140Q96RY7 1462 aa27.17■■□□□ 1.94
JRK-206ENST00000587883 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
JRK-206ENST00000587883 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
JRK-206ENST00000587883 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
JRK-206ENST00000587883 ZNF608Q9ULD9 1512 aaPredicted RBP27.02■■□□□ 1.92
JRK-206ENST00000587883 EIF4G3O43432 1585 aaKnown RBP26.9■■□□□ 1.9
JRK-206ENST00000587883 TARBP1Q13395 1621 aaKnown RBP26.85■■□□□ 1.89
JRK-206ENST00000587883 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
JRK-206ENST00000587883 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.88
JRK-206ENST00000587883 RIMBP3CA6NJZ7 1639 aa26.81■■□□□ 1.88
JRK-206ENST00000587883 RIMBP3BA6NNM3 1639 aa26.81■■□□□ 1.88
JRK-206ENST00000587883 RIMBP3Q9UFD9 1639 aa26.81■■□□□ 1.88
JRK-206ENST00000587883 SOGA1O94964 1423 aa26.76■■□□□ 1.87
JRK-206ENST00000587883 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
JRK-206ENST00000587883 FBLN2P98095 1184 aa26.72■■□□□ 1.87
JRK-206ENST00000587883 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.87
JRK-206ENST00000587883 CHD1O14646 1710 aa26.7■■□□□ 1.86
JRK-206ENST00000587883 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
JRK-206ENST00000587883 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
JRK-206ENST00000587883 FGD5Q6ZNL6 1462 aa26.66■■□□□ 1.86
JRK-206ENST00000587883 CUX1P39880 1505 aa26.61■■□□□ 1.85
JRK-206ENST00000587883 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
JRK-206ENST00000587883 CYB5RLQ6IPT4 315 aa26.58■■□□□ 1.85
JRK-206ENST00000587883 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
JRK-206ENST00000587883 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
JRK-206ENST00000587883 MAGI1Q96QZ7 1491 aaPredicted RBP26.54■■□□□ 1.84
JRK-206ENST00000587883 GRIN2BQ13224 1484 aa26.53■■□□□ 1.84
JRK-206ENST00000587883 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
JRK-206ENST00000587883 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
JRK-206ENST00000587883 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
JRK-206ENST00000587883 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
JRK-206ENST00000587883 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
JRK-206ENST00000587883 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.81
JRK-206ENST00000587883 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
JRK-206ENST00000587883 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
JRK-206ENST00000587883 TRHP20396 242 aaPredicted RBP26.33■■□□□ 1.81
JRK-206ENST00000587883 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
JRK-206ENST00000587883 TOP2BQ02880 1626 aa26.23■■□□□ 1.79
JRK-206ENST00000587883 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
JRK-206ENST00000587883 GRIN2AQ12879 1464 aa26.16■■□□□ 1.78
JRK-206ENST00000587883 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
JRK-206ENST00000587883 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
JRK-206ENST00000587883 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
JRK-206ENST00000587883 NUP160Q12769 1436 aa26.06■■□□□ 1.76
JRK-206ENST00000587883 CEP170Q5SW79 1584 aa26.02■■□□□ 1.76
JRK-206ENST00000587883 SHROOM2Q13796 1616 aa25.93■■□□□ 1.74
JRK-206ENST00000587883 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
JRK-206ENST00000587883 JPH4Q96JJ6 628 aa25.86■■□□□ 1.73
JRK-206ENST00000587883 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
JRK-206ENST00000587883 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
JRK-206ENST00000587883 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms