RNA–Protein interactions for RNA: ENST00000587843.5

ROGDI-209, Transcript of rogdi homolog, humanhuman

TSL 2

Gene ROGDI, Length 1,362 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-209ENST00000587843 NISCHQ9Y2I1 1504 aa59.42■■■■■ 7.1
ROGDI-209ENST00000587843 CCDC180Q9P1Z9 1646 aa52.85■■■■■ 6.05
ROGDI-209ENST00000587843 ABCC9O60706 1549 aa51.37■■■■■ 5.81
ROGDI-209ENST00000587843 NACADO15069 1562 aa49.63■■■■■ 5.53
ROGDI-209ENST00000587843 RB1CC1Q8TDY2 1594 aa49.62■■■■■ 5.53
ROGDI-209ENST00000587843 ZCCHC6Q5VYS8 1495 aaKnown RBP49.56■■■■■ 5.52
ROGDI-209ENST00000587843 MYO15BQ96JP2 1530 aa49.46■■■■■ 5.51
ROGDI-209ENST00000587843 DCAF8L2P0C7V8 631 aa49.39■■■■■ 5.5
ROGDI-209ENST00000587843 DCAF1Q9Y4B6 1507 aa49.28■■■■■ 5.48
ROGDI-209ENST00000587843 UNC13AQ9UPW8 1703 aa48.44■■■■■ 5.35
ROGDI-209ENST00000587843 SCRIBQ14160 1630 aa48.09■■■■■ 5.29
ROGDI-209ENST00000587843 BICRAQ9NZM4 1560 aa48.06■■■■■ 5.28
ROGDI-209ENST00000587843 PABPN1Q86U42 306 aaKnown RBP eCLIP47.96■■■■■ 5.27
ROGDI-209ENST00000587843 SHROOM4Q9ULL8 1493 aa47.75■■■■■ 5.23
ROGDI-209ENST00000587843 DNAJC5BQ9UF47 199 aa46.93■■■■■ 5.1
ROGDI-209ENST00000587843 EIF4G1Q04637 1599 aaKnown RBP46.8■■■■■ 5.08
ROGDI-209ENST00000587843 CC2D2AQ9P2K1 1620 aa46.54■■■■■ 5.04
ROGDI-209ENST00000587843 CECR2Q9BXF3 1484 aa46.19■■■■■ 4.99
ROGDI-209ENST00000587843 SMARCA4P51532 1647 aa46.08■■■■■ 4.97
ROGDI-209ENST00000587843 BAZ1AQ9NRL2 1556 aaPredicted RBP46.08■■■■■ 4.97
ROGDI-209ENST00000587843 SMARCA2P51531 1590 aa45.78■■■■■ 4.92
ROGDI-209ENST00000587843 ATAD2BQ9ULI0 1458 aa45.77■■■■■ 4.92
ROGDI-209ENST00000587843 NCAPD3P42695 1498 aa45.76■■■■■ 4.92
ROGDI-209ENST00000587843 MROH2BQ7Z745 1585 aa45.74■■■■■ 4.91
ROGDI-209ENST00000587843 PEG3Q9GZU2 1588 aa45.7■■■■■ 4.91
ROGDI-209ENST00000587843 HMGXB3Q12766 1538 aa45.59■■■■■ 4.89
ROGDI-209ENST00000587843 BAZ1BQ9UIG0 1483 aaKnown RBP45.41■■■■■ 4.86
ROGDI-209ENST00000587843 RSF1Q96T23 1441 aaPredicted RBP45.29■■■■■ 4.84
ROGDI-209ENST00000587843 WIZO95785 1651 aa45.25■■■■■ 4.83
ROGDI-209ENST00000587843 TOP2AP11388 1531 aaKnown RBP44.86■■■■■ 4.77
ROGDI-209ENST00000587843 LAMC3Q9Y6N6 1575 aa44.56■■■■■ 4.72
ROGDI-209ENST00000587843 NESP48681 1621 aa44.49■■■■■ 4.71
ROGDI-209ENST00000587843 CADPSQ9ULU8 1353 aa44.41■■■■■ 4.7
ROGDI-209ENST00000587843 ERCC6Q03468 1493 aa44.32■■■■■ 4.68
ROGDI-209ENST00000587843 CCDC88BA6NC98 1476 aa44.27■■■■■ 4.68
ROGDI-209ENST00000587843 PDS5BQ9NTI5 1447 aa44.22■■■■■ 4.67
ROGDI-209ENST00000587843 CFTRP13569 1480 aa44.2■■■■■ 4.67
ROGDI-209ENST00000587843 SUPT5HO00267 1087 aaKnown RBP44.13■■■■■ 4.65
ROGDI-209ENST00000587843 KIF21AQ7Z4S6 1674 aa44.03■■■■■ 4.64
ROGDI-209ENST00000587843 PRDM2Q13029 1718 aa43.93■■■■■ 4.62
ROGDI-209ENST00000587843 THOC2Q8NI27 1593 aaKnown RBP43.89■■■■■ 4.62
ROGDI-209ENST00000587843 CUX2O14529 1486 aa43.88■■■■■ 4.61
ROGDI-209ENST00000587843 FANCD2Q9BXW9 1451 aa43.88■■■■■ 4.61
ROGDI-209ENST00000587843 CEP164Q9UPV0 1460 aa43.84■■■■■ 4.61
ROGDI-209ENST00000587843 MRC2Q9UBG0 1479 aa43.74■■■■■ 4.59
ROGDI-209ENST00000587843 WDR62O43379 1518 aa43.62■■■■■ 4.57
ROGDI-209ENST00000587843 URB2Q14146 1524 aaKnown RBP43.41■■■■■ 4.54
ROGDI-209ENST00000587843 ABCC8Q09428 1581 aa43.3■■■■■ 4.52
ROGDI-209ENST00000587843 DNMBPQ6XZF7 1577 aa43.21■■■■■ 4.51
ROGDI-209ENST00000587843 TOPBP1Q92547 1522 aa43.21■■■■■ 4.51
ROGDI-209ENST00000587843 IFT140Q96RY7 1462 aa42.93■■■■■ 4.46
ROGDI-209ENST00000587843 CUX1P39880 1505 aa42.92■■■■■ 4.46
ROGDI-209ENST00000587843 POLA1P09884 1462 aaPredicted RBP42.84■■■■■ 4.45
ROGDI-209ENST00000587843 FGD5Q6ZNL6 1462 aa42.75■■■■■ 4.43
ROGDI-209ENST00000587843 TARBP1Q13395 1621 aaKnown RBP42.74■■■■■ 4.43
ROGDI-209ENST00000587843 WRNQ14191 1432 aaPredicted RBP eCLIP42.72■■■■■ 4.43
ROGDI-209ENST00000587843 BIVM-ERCC5R4GMW8 1640 aa42.66■■■■■ 4.42
ROGDI-209ENST00000587843 SOGA1O94964 1423 aa42.65■■■■■ 4.42
ROGDI-209ENST00000587843 TOP2BQ02880 1626 aa42.65■■■■■ 4.42
ROGDI-209ENST00000587843 ZNF608Q9ULD9 1512 aaPredicted RBP42.62■■■■■ 4.41
ROGDI-209ENST00000587843 RAD54L2Q9Y4B4 1467 aa42.59■■■■■ 4.41
ROGDI-209ENST00000587843 SYNJ1O43426 1573 aa42.58■■■■■ 4.41
ROGDI-209ENST00000587843 EIF4G3O43432 1585 aaKnown RBP42.54■■■■■ 4.4
ROGDI-209ENST00000587843 WDR97A6NE52 1622 aa42.53■■■■■ 4.4
ROGDI-209ENST00000587843 AQRO60306 1485 aaKnown RBP eCLIP42.4■■■■■ 4.381e-6■■■■■ 31.5
ROGDI-209ENST00000587843 ABCA10Q8WWZ4 1543 aa42.4■■■■■ 4.38
ROGDI-209ENST00000587843 TDRD9Q8NDG6 1382 aaKnown RBP42.34■■■■■ 4.37
ROGDI-209ENST00000587843 DNAJC5Q9H3Z4 198 aa42.24■■■■■ 4.35
ROGDI-209ENST00000587843 ABCA5Q8WWZ7 1642 aa42.21■■■■■ 4.35
ROGDI-209ENST00000587843 GAPVD1Q14C86 1478 aa42.19■■■■■ 4.34
ROGDI-209ENST00000587843 GRIN2BQ13224 1484 aa42.18■■■■■ 4.34
ROGDI-209ENST00000587843 PBRM1Q86U86 1689 aa42.1■■■■■ 4.33
ROGDI-209ENST00000587843 MAGI1Q96QZ7 1491 aaPredicted RBP42.09■■■■■ 4.33
ROGDI-209ENST00000587843 SNAPC4Q5SXM2 1469 aa42.06■■■■■ 4.32
ROGDI-209ENST00000587843 OSCARQ8IYS5 282 aa42■■■■■ 4.31
ROGDI-209ENST00000587843 CHD1O14646 1710 aa41.95■■■■■ 4.31
ROGDI-209ENST00000587843 ERICH3Q5RHP9 1530 aa41.92■■■■■ 4.3
ROGDI-209ENST00000587843 SYNJ2O15056 1496 aa41.9■■■■■ 4.3
ROGDI-209ENST00000587843 KIF27Q86VH2 1401 aa41.84■■■■■ 4.29
ROGDI-209ENST00000587843 FBLN2P98095 1184 aa41.81■■■■■ 4.28
ROGDI-209ENST00000587843 ADAMTS12P58397 1594 aa41.8■■■■■ 4.28
ROGDI-209ENST00000587843 CHMP7Q8WUX9 453 aaPredicted RBP41.79■■■■■ 4.28
ROGDI-209ENST00000587843 TRIM41Q8WV44 630 aa41.76■■■■■ 4.27
ROGDI-209ENST00000587843 FHAD1B1AJZ9 1412 aa41.72■■■■■ 4.27
ROGDI-209ENST00000587843 GRIN2AQ12879 1464 aa41.63■■■■■ 4.26
ROGDI-209ENST00000587843 IGF1RP08069 1367 aa41.6■■■■■ 4.25
ROGDI-209ENST00000587843 CUL7Q14999 1698 aa41.58■■■■■ 4.25
ROGDI-209ENST00000587843 CLASP1Q7Z460 1538 aa41.54■■■■■ 4.24
ROGDI-209ENST00000587843 NUP160Q12769 1436 aa41.46■■■■■ 4.23
ROGDI-209ENST00000587843 CEP170Q5SW79 1584 aa41.39■■■■■ 4.22
ROGDI-209ENST00000587843 RUSC2Q8N2Y8 1516 aa41.38■■■■■ 4.22
ROGDI-209ENST00000587843 CARMIL1Q5VZK9 1371 aa41.37■■■■■ 4.21
ROGDI-209ENST00000587843 ARHGEF11O15085 1522 aa41.34■■■■■ 4.21
ROGDI-209ENST00000587843 CHIC1Q5VXU3 224 aa41.33■■■■■ 4.21
ROGDI-209ENST00000587843 RIMBP3CA6NJZ7 1639 aa41.32■■■■■ 4.2
ROGDI-209ENST00000587843 RIMBP3BA6NNM3 1639 aa41.32■■■■■ 4.2
ROGDI-209ENST00000587843 RIMBP3Q9UFD9 1639 aa41.32■■■■■ 4.2
ROGDI-209ENST00000587843 EEA1Q15075 1411 aa41.2■■■■■ 4.19
ROGDI-209ENST00000587843 RAPGEF2Q9Y4G8 1499 aa41.18■■■■■ 4.18
ROGDI-209ENST00000587843 SHROOM2Q13796 1616 aa41.14■■■■■ 4.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms