RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 NISCHQ9Y2I1 1504 aa43.22■■■■■ 4.51
GCDH-206ENST00000587832 CCDC180Q9P1Z9 1646 aa38.91■■■■□ 3.82
GCDH-206ENST00000587832 ABCC9O60706 1549 aa38.56■■■■□ 3.76
GCDH-206ENST00000587832 RB1CC1Q8TDY2 1594 aa36.9■■■■□ 3.5
GCDH-206ENST00000587832 NACADO15069 1562 aa36.67■■■■□ 3.46
GCDH-206ENST00000587832 MYO15BQ96JP2 1530 aa36.26■■■■□ 3.4
GCDH-206ENST00000587832 UNC13AQ9UPW8 1703 aa36.14■■■■□ 3.38
GCDH-206ENST00000587832 DCAF8L2P0C7V8 631 aa36.14■■■■□ 3.38
GCDH-206ENST00000587832 DNAJC5BQ9UF47 199 aa36■■■■□ 3.35
GCDH-206ENST00000587832 ZCCHC6Q5VYS8 1495 aaKnown RBP35.87■■■■□ 3.33
GCDH-206ENST00000587832 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
GCDH-206ENST00000587832 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
GCDH-206ENST00000587832 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
GCDH-206ENST00000587832 SHROOM4Q9ULL8 1493 aa35.44■■■■□ 3.26
GCDH-206ENST00000587832 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
GCDH-206ENST00000587832 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.18
GCDH-206ENST00000587832 EIF4G1Q04637 1599 aaKnown RBP34.91■■■■□ 3.18
GCDH-206ENST00000587832 CECR2Q9BXF3 1484 aa34.77■■■■□ 3.16
GCDH-206ENST00000587832 NCAPD3P42695 1498 aa33.8■■■■□ 3
GCDH-206ENST00000587832 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
GCDH-206ENST00000587832 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
GCDH-206ENST00000587832 SMARCA2P51531 1590 aa33.67■■■□□ 2.98
GCDH-206ENST00000587832 HMGXB3Q12766 1538 aa33.63■■■□□ 2.97
GCDH-206ENST00000587832 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
GCDH-206ENST00000587832 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
GCDH-206ENST00000587832 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
GCDH-206ENST00000587832 CUX2O14529 1486 aa33.32■■■□□ 2.92
GCDH-206ENST00000587832 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
GCDH-206ENST00000587832 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
GCDH-206ENST00000587832 NESP48681 1621 aa33.17■■■□□ 2.9
GCDH-206ENST00000587832 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
GCDH-206ENST00000587832 DNAJC5Q9H3Z4 198 aa33.06■■■□□ 2.88
GCDH-206ENST00000587832 THOC2Q8NI27 1593 aaKnown RBP32.96■■■□□ 2.87
GCDH-206ENST00000587832 WIZO95785 1651 aa32.91■■■□□ 2.86
GCDH-206ENST00000587832 KIF21AQ7Z4S6 1674 aa32.88■■■□□ 2.85
GCDH-206ENST00000587832 PDS5BQ9NTI5 1447 aa32.8■■■□□ 2.84
GCDH-206ENST00000587832 CADPSQ9ULU8 1353 aa32.72■■■□□ 2.83
GCDH-206ENST00000587832 RSF1Q96T23 1441 aaPredicted RBP32.59■■■□□ 2.81
GCDH-206ENST00000587832 MRC2Q9UBG0 1479 aa32.54■■■□□ 2.8
GCDH-206ENST00000587832 TOP2AP11388 1531 aaKnown RBP32.53■■■□□ 2.8
GCDH-206ENST00000587832 WDR62O43379 1518 aa32.51■■■□□ 2.79
GCDH-206ENST00000587832 CFTRP13569 1480 aa32.42■■■□□ 2.78
GCDH-206ENST00000587832 CEP164Q9UPV0 1460 aa32.42■■■□□ 2.78
GCDH-206ENST00000587832 FANCD2Q9BXW9 1451 aa32.37■■■□□ 2.77
GCDH-206ENST00000587832 PRDM2Q13029 1718 aa32.3■■■□□ 2.76
GCDH-206ENST00000587832 URB2Q14146 1524 aaKnown RBP32.1■■■□□ 2.73
GCDH-206ENST00000587832 CCDC88BA6NC98 1476 aa32.07■■■□□ 2.72
GCDH-206ENST00000587832 TOPBP1Q92547 1522 aa31.79■■■□□ 2.68
GCDH-206ENST00000587832 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
GCDH-206ENST00000587832 IFT140Q96RY7 1462 aa31.77■■■□□ 2.68
GCDH-206ENST00000587832 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
GCDH-206ENST00000587832 ZNF608Q9ULD9 1512 aaPredicted RBP31.66■■■□□ 2.66
GCDH-206ENST00000587832 OSCARQ8IYS5 282 aa31.66■■■□□ 2.66
GCDH-206ENST00000587832 EIF4G3O43432 1585 aaKnown RBP31.6■■■□□ 2.65
GCDH-206ENST00000587832 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
GCDH-206ENST00000587832 TRIM41Q8WV44 630 aa31.53■■■□□ 2.64
GCDH-206ENST00000587832 POLA1P09884 1462 aaPredicted RBP31.46■■■□□ 2.63
GCDH-206ENST00000587832 RIMBP3CA6NJZ7 1639 aa31.38■■■□□ 2.61
GCDH-206ENST00000587832 RIMBP3BA6NNM3 1639 aa31.38■■■□□ 2.61
GCDH-206ENST00000587832 RIMBP3Q9UFD9 1639 aa31.38■■■□□ 2.61
GCDH-206ENST00000587832 CHD1O14646 1710 aa31.37■■■□□ 2.61
GCDH-206ENST00000587832 AQRO60306 1485 aaKnown RBP eCLIP31.34■■■□□ 2.61
GCDH-206ENST00000587832 WDR97A6NE52 1622 aa31.34■■■□□ 2.61
GCDH-206ENST00000587832 CUX1P39880 1505 aa31.28■■■□□ 2.6
GCDH-206ENST00000587832 ARHGEF11O15085 1522 aa31.27■■■□□ 2.6
GCDH-206ENST00000587832 FGD5Q6ZNL6 1462 aa31.27■■■□□ 2.6
GCDH-206ENST00000587832 RAD54L2Q9Y4B4 1467 aa31.27■■■□□ 2.6
GCDH-206ENST00000587832 SOGA1O94964 1423 aa31.25■■■□□ 2.59
GCDH-206ENST00000587832 TDRD9Q8NDG6 1382 aaKnown RBP31.14■■■□□ 2.58
GCDH-206ENST00000587832 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
GCDH-206ENST00000587832 MAGI1Q96QZ7 1491 aaPredicted RBP31.08■■■□□ 2.57
GCDH-206ENST00000587832 GRIN2BQ13224 1484 aa31.04■■■□□ 2.56
GCDH-206ENST00000587832 PBRM1Q86U86 1689 aa31.03■■■□□ 2.56
GCDH-206ENST00000587832 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
GCDH-206ENST00000587832 FBLN2P98095 1184 aa31.01■■■□□ 2.55
GCDH-206ENST00000587832 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
GCDH-206ENST00000587832 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
GCDH-206ENST00000587832 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
GCDH-206ENST00000587832 ABCA10Q8WWZ4 1543 aa30.96■■■□□ 2.55
GCDH-206ENST00000587832 SYNJ2O15056 1496 aa30.95■■■□□ 2.54
GCDH-206ENST00000587832 ARAP1Q96P48 1450 aa30.95■■■□□ 2.54
GCDH-206ENST00000587832 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
GCDH-206ENST00000587832 BIVM-ERCC5R4GMW8 1640 aa30.9■■■□□ 2.54
GCDH-206ENST00000587832 CHMP7Q8WUX9 453 aaPredicted RBP30.86■■■□□ 2.53
GCDH-206ENST00000587832 TOP2BQ02880 1626 aa30.86■■■□□ 2.53
GCDH-206ENST00000587832 CYB5RLQ6IPT4 315 aa30.85■■■□□ 2.53
GCDH-206ENST00000587832 WRNQ14191 1432 aaPredicted RBP eCLIP30.8■■■□□ 2.52
GCDH-206ENST00000587832 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
GCDH-206ENST00000587832 GRIN2AQ12879 1464 aa30.65■■■□□ 2.5
GCDH-206ENST00000587832 ERICH3Q5RHP9 1530 aa30.6■■■□□ 2.49
GCDH-206ENST00000587832 NUP160Q12769 1436 aa30.56■■■□□ 2.48
GCDH-206ENST00000587832 CEP170Q5SW79 1584 aa30.55■■■□□ 2.48
GCDH-206ENST00000587832 FHAD1B1AJZ9 1412 aa30.55■■■□□ 2.48
GCDH-206ENST00000587832 SHROOM2Q13796 1616 aa30.5■■■□□ 2.47
GCDH-206ENST00000587832 TRHP20396 242 aaPredicted RBP30.45■■■□□ 2.47
GCDH-206ENST00000587832 ERCC6L2Q5T890 1561 aa30.43■■■□□ 2.46
GCDH-206ENST00000587832 RUSC2Q8N2Y8 1516 aa30.28■■■□□ 2.44
GCDH-206ENST00000587832 CUL7Q14999 1698 aa30.23■■■□□ 2.43
GCDH-206ENST00000587832 PRG4Q92954 1404 aaPredicted RBP30.17■■■□□ 2.42
GCDH-206ENST00000587832 KIF27Q86VH2 1401 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms