RNA–Protein interactions for RNA: ENST00000587802.5

SAFB2-203, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-203ENST00000587802 NISCHQ9Y2I1 1504 aa54.61■■■■■ 6.33
SAFB2-203ENST00000587802 CCDC180Q9P1Z9 1646 aa48.64■■■■■ 5.38
SAFB2-203ENST00000587802 ABCC9O60706 1549 aa47.51■■■■■ 5.2
SAFB2-203ENST00000587802 RB1CC1Q8TDY2 1594 aa45.79■■■■■ 4.92
SAFB2-203ENST00000587802 NACADO15069 1562 aa45.72■■■■■ 4.91
SAFB2-203ENST00000587802 DCAF8L2P0C7V8 631 aa45.6■■■■■ 4.89
SAFB2-203ENST00000587802 ZCCHC6Q5VYS8 1495 aaKnown RBP45.49■■■■■ 4.87
SAFB2-203ENST00000587802 MYO15BQ96JP2 1530 aa45.47■■■■■ 4.87
SAFB2-203ENST00000587802 DCAF1Q9Y4B6 1507 aa45.24■■■■■ 4.83
SAFB2-203ENST00000587802 UNC13AQ9UPW8 1703 aa44.7■■■■■ 4.75
SAFB2-203ENST00000587802 PABPN1Q86U42 306 aaKnown RBP eCLIP44.36■■■■■ 4.695e-8■■■□□ 15.2
SAFB2-203ENST00000587802 BICRAQ9NZM4 1560 aa44.32■■■■■ 4.69
SAFB2-203ENST00000587802 SCRIBQ14160 1630 aa44.29■■■■■ 4.68
SAFB2-203ENST00000587802 SHROOM4Q9ULL8 1493 aa43.98■■■■■ 4.63
SAFB2-203ENST00000587802 DNAJC5BQ9UF47 199 aa43.57■■■■■ 4.57
SAFB2-203ENST00000587802 EIF4G1Q04637 1599 aaKnown RBP43.18■■■■■ 4.5
SAFB2-203ENST00000587802 CC2D2AQ9P2K1 1620 aa43.01■■■■■ 4.48
SAFB2-203ENST00000587802 CECR2Q9BXF3 1484 aa42.73■■■■■ 4.43
SAFB2-203ENST00000587802 SMARCA4P51532 1647 aa42.39■■■■■ 4.38
SAFB2-203ENST00000587802 BAZ1AQ9NRL2 1556 aaPredicted RBP42.37■■■■■ 4.37
SAFB2-203ENST00000587802 SMARCA2P51531 1590 aa42.16■■■■■ 4.34
SAFB2-203ENST00000587802 NCAPD3P42695 1498 aa42.16■■■■■ 4.34
SAFB2-203ENST00000587802 ATAD2BQ9ULI0 1458 aa42.16■■■■■ 4.34
SAFB2-203ENST00000587802 MROH2BQ7Z745 1585 aa42.05■■■■■ 4.32
SAFB2-203ENST00000587802 PEG3Q9GZU2 1588 aa42.01■■■■■ 4.32
SAFB2-203ENST00000587802 HMGXB3Q12766 1538 aa41.98■■■■■ 4.31
SAFB2-203ENST00000587802 BAZ1BQ9UIG0 1483 aaKnown RBP41.84■■■■■ 4.29
SAFB2-203ENST00000587802 WIZO95785 1651 aa41.61■■■■■ 4.25
SAFB2-203ENST00000587802 RSF1Q96T23 1441 aaPredicted RBP41.57■■■■■ 4.25
SAFB2-203ENST00000587802 TOP2AP11388 1531 aaKnown RBP41.21■■■■■ 4.19
SAFB2-203ENST00000587802 LAMC3Q9Y6N6 1575 aa41.08■■■■■ 4.17
SAFB2-203ENST00000587802 NESP48681 1621 aa41.08■■■■■ 4.17
SAFB2-203ENST00000587802 ERCC6Q03468 1493 aa41.02■■■■■ 4.16
SAFB2-203ENST00000587802 CADPSQ9ULU8 1353 aa40.93■■■■■ 4.14
SAFB2-203ENST00000587802 PDS5BQ9NTI5 1447 aa40.81■■■■■ 4.12
SAFB2-203ENST00000587802 CCDC88BA6NC98 1476 aa40.69■■■■■ 4.1
SAFB2-203ENST00000587802 CFTRP13569 1480 aa40.67■■■■■ 4.1
SAFB2-203ENST00000587802 KIF21AQ7Z4S6 1674 aa40.66■■■■■ 4.1
SAFB2-203ENST00000587802 CUX2O14529 1486 aa40.62■■■■■ 4.09
SAFB2-203ENST00000587802 THOC2Q8NI27 1593 aaKnown RBP40.52■■■■■ 4.08
SAFB2-203ENST00000587802 SUPT5HO00267 1087 aaKnown RBP40.48■■■■■ 4.07
SAFB2-203ENST00000587802 FANCD2Q9BXW9 1451 aa40.45■■■■■ 4.07
SAFB2-203ENST00000587802 PRDM2Q13029 1718 aa40.43■■■■■ 4.06
SAFB2-203ENST00000587802 CEP164Q9UPV0 1460 aa40.42■■■■■ 4.06
SAFB2-203ENST00000587802 MRC2Q9UBG0 1479 aa40.37■■■■■ 4.05
SAFB2-203ENST00000587802 WDR62O43379 1518 aa40.23■■■■■ 4.03
SAFB2-203ENST00000587802 URB2Q14146 1524 aaKnown RBP40.02■■■■■ 4
SAFB2-203ENST00000587802 ABCC8Q09428 1581 aa39.87■■■■□ 3.97
SAFB2-203ENST00000587802 TOPBP1Q92547 1522 aa39.8■■■■□ 3.96
SAFB2-203ENST00000587802 DNMBPQ6XZF7 1577 aa39.78■■■■□ 3.96
SAFB2-203ENST00000587802 IFT140Q96RY7 1462 aa39.59■■■■□ 3.93
SAFB2-203ENST00000587802 CUX1P39880 1505 aa39.46■■■■□ 3.91
SAFB2-203ENST00000587802 POLA1P09884 1462 aaPredicted RBP39.45■■■■□ 3.91
SAFB2-203ENST00000587802 TARBP1Q13395 1621 aaKnown RBP39.36■■■■□ 3.89
SAFB2-203ENST00000587802 DNAJC5Q9H3Z4 198 aa39.35■■■■□ 3.89
SAFB2-203ENST00000587802 FGD5Q6ZNL6 1462 aa39.35■■■■□ 3.89
SAFB2-203ENST00000587802 ZNF608Q9ULD9 1512 aaPredicted RBP39.34■■■■□ 3.89
SAFB2-203ENST00000587802 SOGA1O94964 1423 aa39.3■■■■□ 3.88
SAFB2-203ENST00000587802 RAD54L2Q9Y4B4 1467 aa39.24■■■■□ 3.87
SAFB2-203ENST00000587802 WRNQ14191 1432 aaPredicted RBP eCLIP39.23■■■■□ 3.87
SAFB2-203ENST00000587802 EIF4G3O43432 1585 aaKnown RBP39.23■■■■□ 3.87
SAFB2-203ENST00000587802 TOP2BQ02880 1626 aa39.16■■■■□ 3.86
SAFB2-203ENST00000587802 BIVM-ERCC5R4GMW8 1640 aa39.16■■■■□ 3.86
SAFB2-203ENST00000587802 WDR97A6NE52 1622 aa39.14■■■■□ 3.86
SAFB2-203ENST00000587802 AQRO60306 1485 aaKnown RBP eCLIP39.12■■■■□ 3.85
SAFB2-203ENST00000587802 SYNJ1O43426 1573 aa39.1■■■■□ 3.85
SAFB2-203ENST00000587802 TDRD9Q8NDG6 1382 aaKnown RBP39.05■■■■□ 3.84
SAFB2-203ENST00000587802 ABCA10Q8WWZ4 1543 aa39■■■■□ 3.83
SAFB2-203ENST00000587802 OSCARQ8IYS5 282 aa38.91■■■■□ 3.82
SAFB2-203ENST00000587802 GRIN2BQ13224 1484 aa38.86■■■■□ 3.81
SAFB2-203ENST00000587802 GAPVD1Q14C86 1478 aa38.86■■■■□ 3.81
SAFB2-203ENST00000587802 ABCA5Q8WWZ7 1642 aa38.83■■■■□ 3.81
SAFB2-203ENST00000587802 SNAPC4Q5SXM2 1469 aa38.79■■■■□ 3.8
SAFB2-203ENST00000587802 MAGI1Q96QZ7 1491 aaPredicted RBP38.79■■■■□ 3.8
SAFB2-203ENST00000587802 PBRM1Q86U86 1689 aa38.78■■■■□ 3.8
SAFB2-203ENST00000587802 CHD1O14646 1710 aa38.75■■■■□ 3.79
SAFB2-203ENST00000587802 FBLN2P98095 1184 aa38.68■■■■□ 3.78
SAFB2-203ENST00000587802 SYNJ2O15056 1496 aa38.62■■■■□ 3.77
SAFB2-203ENST00000587802 CHMP7Q8WUX9 453 aaPredicted RBP38.6■■■■□ 3.77
SAFB2-203ENST00000587802 ERICH3Q5RHP9 1530 aa38.55■■■■□ 3.76
SAFB2-203ENST00000587802 ADAMTS12P58397 1594 aa38.47■■■■□ 3.75
SAFB2-203ENST00000587802 KIF27Q86VH2 1401 aa38.44■■■■□ 3.74
SAFB2-203ENST00000587802 FHAD1B1AJZ9 1412 aa38.42■■■■□ 3.74
SAFB2-203ENST00000587802 GRIN2AQ12879 1464 aa38.35■■■■□ 3.73
SAFB2-203ENST00000587802 CLASP1Q7Z460 1538 aa38.32■■■■□ 3.72
SAFB2-203ENST00000587802 TRIM41Q8WV44 630 aa38.28■■■■□ 3.72
SAFB2-203ENST00000587802 RIMBP3CA6NJZ7 1639 aa38.27■■■■□ 3.72
SAFB2-203ENST00000587802 RIMBP3BA6NNM3 1639 aa38.27■■■■□ 3.72
SAFB2-203ENST00000587802 RIMBP3Q9UFD9 1639 aa38.27■■■■□ 3.72
SAFB2-203ENST00000587802 ARHGEF11O15085 1522 aa38.26■■■■□ 3.72
SAFB2-203ENST00000587802 IGF1RP08069 1367 aa38.24■■■■□ 3.71
SAFB2-203ENST00000587802 CUL7Q14999 1698 aa38.21■■■■□ 3.71
SAFB2-203ENST00000587802 NUP160Q12769 1436 aa38.18■■■■□ 3.7
SAFB2-203ENST00000587802 CEP170Q5SW79 1584 aa38.14■■■■□ 3.7
SAFB2-203ENST00000587802 CARMIL1Q5VZK9 1371 aa38.03■■■■□ 3.68
SAFB2-203ENST00000587802 RUSC2Q8N2Y8 1516 aa37.97■■■■□ 3.67
SAFB2-203ENST00000587802 ARAP1Q96P48 1450 aa37.93■■■■□ 3.66
SAFB2-203ENST00000587802 SHROOM2Q13796 1616 aa37.91■■■■□ 3.66
SAFB2-203ENST00000587802 CYB5RLQ6IPT4 315 aa37.88■■■■□ 3.65
SAFB2-203ENST00000587802 KIAA0586Q9BVV6 1533 aa37.83■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms