RNA–Protein interactions for RNA: ENST00000587719.1

C18orf21-203, Transcript of chromosome 18 open reading frame 21, humanhuman

TSL 4

Gene C18orf21, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C18orf21-203ENST00000587719 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
C18orf21-203ENST00000587719 ABCC9O60706 1549 aa30.4■■■□□ 2.46
C18orf21-203ENST00000587719 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
C18orf21-203ENST00000587719 DNAJC5BQ9UF47 199 aa29.06■■■□□ 2.24
C18orf21-203ENST00000587719 RB1CC1Q8TDY2 1594 aa28.63■■■□□ 2.17
C18orf21-203ENST00000587719 NACADO15069 1562 aa28.29■■■□□ 2.12
C18orf21-203ENST00000587719 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
C18orf21-203ENST00000587719 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
C18orf21-203ENST00000587719 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
C18orf21-203ENST00000587719 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
C18orf21-203ENST00000587719 MYO15BQ96JP2 1530 aa27.69■■■□□ 2.02
C18orf21-203ENST00000587719 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
C18orf21-203ENST00000587719 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
C18orf21-203ENST00000587719 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
C18orf21-203ENST00000587719 EIF4G1Q04637 1599 aaKnown RBP27.19■■□□□ 1.94
C18orf21-203ENST00000587719 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
C18orf21-203ENST00000587719 DCAF1Q9Y4B6 1507 aa27.12■■□□□ 1.93
C18orf21-203ENST00000587719 DNAJC5Q9H3Z4 198 aa27.12■■□□□ 1.93
C18orf21-203ENST00000587719 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
C18orf21-203ENST00000587719 CUX2O14529 1486 aa26.42■■□□□ 1.82
C18orf21-203ENST00000587719 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
C18orf21-203ENST00000587719 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
C18orf21-203ENST00000587719 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
C18orf21-203ENST00000587719 NESP48681 1621 aa25.94■■□□□ 1.74
C18orf21-203ENST00000587719 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
C18orf21-203ENST00000587719 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
C18orf21-203ENST00000587719 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
C18orf21-203ENST00000587719 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
C18orf21-203ENST00000587719 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
C18orf21-203ENST00000587719 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
C18orf21-203ENST00000587719 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
C18orf21-203ENST00000587719 BAZ1AQ9NRL2 1556 aaPredicted RBP25.59■■□□□ 1.69
C18orf21-203ENST00000587719 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
C18orf21-203ENST00000587719 KIF21AQ7Z4S6 1674 aa25.53■■□□□ 1.68
C18orf21-203ENST00000587719 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
C18orf21-203ENST00000587719 MROH2BQ7Z745 1585 aa25.36■■□□□ 1.65
C18orf21-203ENST00000587719 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
C18orf21-203ENST00000587719 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
C18orf21-203ENST00000587719 WDR62O43379 1518 aa25.27■■□□□ 1.64
C18orf21-203ENST00000587719 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
C18orf21-203ENST00000587719 CEP164Q9UPV0 1460 aa25.13■■□□□ 1.61
C18orf21-203ENST00000587719 FANCD2Q9BXW9 1451 aa25.05■■□□□ 1.6
C18orf21-203ENST00000587719 WIZO95785 1651 aa25.01■■□□□ 1.59
C18orf21-203ENST00000587719 CFTRP13569 1480 aa24.91■■□□□ 1.58
C18orf21-203ENST00000587719 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
C18orf21-203ENST00000587719 RIMBP3CA6NJZ7 1639 aa24.83■■□□□ 1.57
C18orf21-203ENST00000587719 RIMBP3BA6NNM3 1639 aa24.83■■□□□ 1.57
C18orf21-203ENST00000587719 RIMBP3Q9UFD9 1639 aa24.83■■□□□ 1.57
C18orf21-203ENST00000587719 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
C18orf21-203ENST00000587719 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
C18orf21-203ENST00000587719 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
C18orf21-203ENST00000587719 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
C18orf21-203ENST00000587719 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
C18orf21-203ENST00000587719 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
C18orf21-203ENST00000587719 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
C18orf21-203ENST00000587719 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
C18orf21-203ENST00000587719 TOPBP1Q92547 1522 aa24.5■■□□□ 1.51
C18orf21-203ENST00000587719 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
C18orf21-203ENST00000587719 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
C18orf21-203ENST00000587719 FBLN2P98095 1184 aa24.42■■□□□ 1.5
C18orf21-203ENST00000587719 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
C18orf21-203ENST00000587719 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
C18orf21-203ENST00000587719 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.5
C18orf21-203ENST00000587719 CHD1O14646 1710 aa24.38■■□□□ 1.49
C18orf21-203ENST00000587719 DNMBPQ6XZF7 1577 aa24.34■■□□□ 1.49
C18orf21-203ENST00000587719 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
C18orf21-203ENST00000587719 TARBP1Q13395 1621 aaKnown RBP24.3■■□□□ 1.48
C18orf21-203ENST00000587719 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
C18orf21-203ENST00000587719 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
C18orf21-203ENST00000587719 RAD54L2Q9Y4B4 1467 aa24.16■■□□□ 1.46
C18orf21-203ENST00000587719 SOGA1O94964 1423 aa24.13■■□□□ 1.45
C18orf21-203ENST00000587719 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
C18orf21-203ENST00000587719 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
C18orf21-203ENST00000587719 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
C18orf21-203ENST00000587719 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
C18orf21-203ENST00000587719 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
C18orf21-203ENST00000587719 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
C18orf21-203ENST00000587719 FGD5Q6ZNL6 1462 aa23.98■■□□□ 1.43
C18orf21-203ENST00000587719 GRIN2BQ13224 1484 aa23.96■■□□□ 1.43
C18orf21-203ENST00000587719 SYNJ2O15056 1496 aa23.95■■□□□ 1.42
C18orf21-203ENST00000587719 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
C18orf21-203ENST00000587719 CUX1P39880 1505 aa23.86■■□□□ 1.41
C18orf21-203ENST00000587719 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
C18orf21-203ENST00000587719 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.38
C18orf21-203ENST00000587719 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
C18orf21-203ENST00000587719 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
C18orf21-203ENST00000587719 GRIN2AQ12879 1464 aa23.64■■□□□ 1.38
C18orf21-203ENST00000587719 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
C18orf21-203ENST00000587719 NUP160Q12769 1436 aa23.58■■□□□ 1.36
C18orf21-203ENST00000587719 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
C18orf21-203ENST00000587719 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
C18orf21-203ENST00000587719 KIF13AQ9H1H9 1805 aa23.5■■□□□ 1.35
C18orf21-203ENST00000587719 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
C18orf21-203ENST00000587719 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
C18orf21-203ENST00000587719 FAM69CQ0P6D2 419 aa23.45■■□□□ 1.34
C18orf21-203ENST00000587719 PRG4Q92954 1404 aaPredicted RBP23.44■■□□□ 1.34
C18orf21-203ENST00000587719 NPM1P06748 294 aaKnown RBP eCLIP23.4■■□□□ 1.34
C18orf21-203ENST00000587719 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
C18orf21-203ENST00000587719 ABCC10Q5T3U5 1492 aa23.37■■□□□ 1.33
C18orf21-203ENST00000587719 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms