RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
TNFRSF11A-203ENST00000587697 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
TNFRSF11A-203ENST00000587697 ZCCHC6Q5VYS8 1495 aaKnown RBP23.35■■□□□ 1.33
TNFRSF11A-203ENST00000587697 ABCC9O60706 1549 aa23.1■■□□□ 1.29
TNFRSF11A-203ENST00000587697 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
TNFRSF11A-203ENST00000587697 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
TNFRSF11A-203ENST00000587697 NACADO15069 1562 aa22.77■■□□□ 1.24
TNFRSF11A-203ENST00000587697 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
TNFRSF11A-203ENST00000587697 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
TNFRSF11A-203ENST00000587697 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
TNFRSF11A-203ENST00000587697 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
TNFRSF11A-203ENST00000587697 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
TNFRSF11A-203ENST00000587697 BICRAQ9NZM4 1560 aa21.97■■□□□ 1.11
TNFRSF11A-203ENST00000587697 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
TNFRSF11A-203ENST00000587697 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
TNFRSF11A-203ENST00000587697 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF11A-203ENST00000587697 SMARCA4P51532 1647 aa21.48■■□□□ 1.03
TNFRSF11A-203ENST00000587697 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
TNFRSF11A-203ENST00000587697 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF11A-203ENST00000587697 WIZO95785 1651 aa21.32■■□□□ 1
TNFRSF11A-203ENST00000587697 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
TNFRSF11A-203ENST00000587697 EIF4G1Q04637 1599 aaKnown RBP21.27■■□□□ 1
TNFRSF11A-203ENST00000587697 PEG3Q9GZU2 1588 aa21.27■□□□□ 0.99
TNFRSF11A-203ENST00000587697 SMARCA2P51531 1590 aa21.13■□□□□ 0.97
TNFRSF11A-203ENST00000587697 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
TNFRSF11A-203ENST00000587697 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
TNFRSF11A-203ENST00000587697 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
TNFRSF11A-203ENST00000587697 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
TNFRSF11A-203ENST00000587697 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
TNFRSF11A-203ENST00000587697 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
TNFRSF11A-203ENST00000587697 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
TNFRSF11A-203ENST00000587697 PRDM2Q13029 1718 aa20.58■□□□□ 0.89
TNFRSF11A-203ENST00000587697 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
TNFRSF11A-203ENST00000587697 CFTRP13569 1480 aa20.42■□□□□ 0.86
TNFRSF11A-203ENST00000587697 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
TNFRSF11A-203ENST00000587697 LAMC3Q9Y6N6 1575 aa20.34■□□□□ 0.85
TNFRSF11A-203ENST00000587697 CADPSQ9ULU8 1353 aa20.33■□□□□ 0.84
TNFRSF11A-203ENST00000587697 ABCC8Q09428 1581 aa20.31■□□□□ 0.84
TNFRSF11A-203ENST00000587697 NESP48681 1621 aa20.24■□□□□ 0.83
TNFRSF11A-203ENST00000587697 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
TNFRSF11A-203ENST00000587697 SYNJ1O43426 1573 aa20.19■□□□□ 0.82
TNFRSF11A-203ENST00000587697 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
TNFRSF11A-203ENST00000587697 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.82
TNFRSF11A-203ENST00000587697 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
TNFRSF11A-203ENST00000587697 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
TNFRSF11A-203ENST00000587697 CUX1P39880 1505 aa20.09■□□□□ 0.81
TNFRSF11A-203ENST00000587697 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
TNFRSF11A-203ENST00000587697 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
TNFRSF11A-203ENST00000587697 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
TNFRSF11A-203ENST00000587697 DNMBPQ6XZF7 1577 aa20.02■□□□□ 0.8
TNFRSF11A-203ENST00000587697 URB2Q14146 1524 aaKnown RBP19.94■□□□□ 0.78
TNFRSF11A-203ENST00000587697 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
TNFRSF11A-203ENST00000587697 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
TNFRSF11A-203ENST00000587697 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
TNFRSF11A-203ENST00000587697 FGD5Q6ZNL6 1462 aa19.87■□□□□ 0.77
TNFRSF11A-203ENST00000587697 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
TNFRSF11A-203ENST00000587697 WDR62O43379 1518 aa19.85■□□□□ 0.77
TNFRSF11A-203ENST00000587697 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
TNFRSF11A-203ENST00000587697 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
TNFRSF11A-203ENST00000587697 SOGA1O94964 1423 aa19.81■□□□□ 0.76
TNFRSF11A-203ENST00000587697 EEA1Q15075 1411 aa19.8■□□□□ 0.76
TNFRSF11A-203ENST00000587697 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
TNFRSF11A-203ENST00000587697 TARBP1Q13395 1621 aaKnown RBP19.74■□□□□ 0.75
TNFRSF11A-203ENST00000587697 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
TNFRSF11A-203ENST00000587697 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
TNFRSF11A-203ENST00000587697 ABCA5Q8WWZ7 1642 aa19.67■□□□□ 0.74
TNFRSF11A-203ENST00000587697 KIF27Q86VH2 1401 aa19.67■□□□□ 0.74
TNFRSF11A-203ENST00000587697 CUX2O14529 1486 aa19.67■□□□□ 0.74
TNFRSF11A-203ENST00000587697 KIF21BO75037 1637 aa19.66■□□□□ 0.74
TNFRSF11A-203ENST00000587697 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF11A-203ENST00000587697 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
TNFRSF11A-203ENST00000587697 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
TNFRSF11A-203ENST00000587697 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
TNFRSF11A-203ENST00000587697 CUL7Q14999 1698 aa19.55■□□□□ 0.72
TNFRSF11A-203ENST00000587697 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
TNFRSF11A-203ENST00000587697 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
TNFRSF11A-203ENST00000587697 LOC105371045A0A1W2PR82 267 aa19.51■□□□□ 0.71
TNFRSF11A-203ENST00000587697 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
TNFRSF11A-203ENST00000587697 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
TNFRSF11A-203ENST00000587697 GAPVD1Q14C86 1478 aa19.49■□□□□ 0.71
TNFRSF11A-203ENST00000587697 IGF1RP08069 1367 aa19.46■□□□□ 0.71
TNFRSF11A-203ENST00000587697 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF11A-203ENST00000587697 TDRD9Q8NDG6 1382 aaKnown RBP19.45■□□□□ 0.7
TNFRSF11A-203ENST00000587697 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
TNFRSF11A-203ENST00000587697 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
TNFRSF11A-203ENST00000587697 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.7
TNFRSF11A-203ENST00000587697 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
TNFRSF11A-203ENST00000587697 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
TNFRSF11A-203ENST00000587697 CTTNBP2Q8WZ74 1663 aa19.36■□□□□ 0.69
TNFRSF11A-203ENST00000587697 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
TNFRSF11A-203ENST00000587697 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
TNFRSF11A-203ENST00000587697 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
TNFRSF11A-203ENST00000587697 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF11A-203ENST00000587697 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
TNFRSF11A-203ENST00000587697 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
TNFRSF11A-203ENST00000587697 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
TNFRSF11A-203ENST00000587697 SYNJ2O15056 1496 aa19.19■□□□□ 0.66
TNFRSF11A-203ENST00000587697 CHD1O14646 1710 aa19.19■□□□□ 0.66
TNFRSF11A-203ENST00000587697 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
TNFRSF11A-203ENST00000587697 CLIP1P30622 1438 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms