RNA–Protein interactions for RNA: ENST00000587673.5

SBNO2-206, Transcript of strawberry notch homolog 2, humanhuman

TSL 5

Gene SBNO2, Length 1,209 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO2-206ENST00000587673 NISCHQ9Y2I1 1504 aa57.92■■■■■ 6.86
SBNO2-206ENST00000587673 CCDC180Q9P1Z9 1646 aa51.66■■■■■ 5.86
SBNO2-206ENST00000587673 ABCC9O60706 1549 aa51.34■■■■■ 5.81
SBNO2-206ENST00000587673 RB1CC1Q8TDY2 1594 aa48.93■■■■■ 5.42
SBNO2-206ENST00000587673 DCAF8L2P0C7V8 631 aa48.76■■■■■ 5.4
SBNO2-206ENST00000587673 NACADO15069 1562 aa48.71■■■■■ 5.39
SBNO2-206ENST00000587673 MYO15BQ96JP2 1530 aa48.14■■■■■ 5.3
SBNO2-206ENST00000587673 ZCCHC6Q5VYS8 1495 aaKnown RBP48.11■■■■■ 5.29
SBNO2-206ENST00000587673 UNC13AQ9UPW8 1703 aa48.02■■■■■ 5.28
SBNO2-206ENST00000587673 PABPN1Q86U42 306 aaKnown RBP eCLIP47.95■■■■■ 5.27
SBNO2-206ENST00000587673 DNAJC5BQ9UF47 199 aa47.84■■■■■ 5.25
SBNO2-206ENST00000587673 DCAF1Q9Y4B6 1507 aa47.76■■■■■ 5.24
SBNO2-206ENST00000587673 BICRAQ9NZM4 1560 aa47.66■■■■■ 5.22
SBNO2-206ENST00000587673 SCRIBQ14160 1630 aa47.28■■■■■ 5.16
SBNO2-206ENST00000587673 SHROOM4Q9ULL8 1493 aa46.75■■■■■ 5.07
SBNO2-206ENST00000587673 CC2D2AQ9P2K1 1620 aa46.36■■■■■ 5.01
SBNO2-206ENST00000587673 EIF4G1Q04637 1599 aaKnown RBP46.36■■■■■ 5.01
SBNO2-206ENST00000587673 CECR2Q9BXF3 1484 aa46.12■■■■■ 4.97
SBNO2-206ENST00000587673 SMARCA4P51532 1647 aa45.09■■■■■ 4.81
SBNO2-206ENST00000587673 NCAPD3P42695 1498 aa45■■■■■ 4.79
SBNO2-206ENST00000587673 ATAD2BQ9ULI0 1458 aa45■■■■■ 4.79
SBNO2-206ENST00000587673 BAZ1AQ9NRL2 1556 aaPredicted RBP44.86■■■■■ 4.77
SBNO2-206ENST00000587673 SMARCA2P51531 1590 aa44.79■■■■■ 4.76
SBNO2-206ENST00000587673 MROH2BQ7Z745 1585 aa44.73■■■■■ 4.75
SBNO2-206ENST00000587673 HMGXB3Q12766 1538 aa44.69■■■■■ 4.74
SBNO2-206ENST00000587673 PEG3Q9GZU2 1588 aa44.58■■■■■ 4.73
SBNO2-206ENST00000587673 BAZ1BQ9UIG0 1483 aaKnown RBP44.55■■■■■ 4.72
SBNO2-206ENST00000587673 NESP48681 1621 aa44.32■■■■■ 4.68
SBNO2-206ENST00000587673 WIZO95785 1651 aa44.24■■■■■ 4.67
SBNO2-206ENST00000587673 ERCC6Q03468 1493 aa44.16■■■■■ 4.66
SBNO2-206ENST00000587673 RSF1Q96T23 1441 aaPredicted RBP43.96■■■■■ 4.63
SBNO2-206ENST00000587673 LAMC3Q9Y6N6 1575 aa43.87■■■■■ 4.61
SBNO2-206ENST00000587673 DNAJC5Q9H3Z4 198 aa43.86■■■■■ 4.61
SBNO2-206ENST00000587673 CUX2O14529 1486 aa43.84■■■■■ 4.61
SBNO2-206ENST00000587673 KIF21AQ7Z4S6 1674 aa43.71■■■■■ 4.59
SBNO2-206ENST00000587673 CADPSQ9ULU8 1353 aa43.67■■■■■ 4.58
SBNO2-206ENST00000587673 THOC2Q8NI27 1593 aaKnown RBP43.66■■■■■ 4.58
SBNO2-206ENST00000587673 TOP2AP11388 1531 aaKnown RBP43.59■■■■■ 4.57
SBNO2-206ENST00000587673 PDS5BQ9NTI5 1447 aa43.57■■■■■ 4.57
SBNO2-206ENST00000587673 CFTRP13569 1480 aa43.3■■■■■ 4.52
SBNO2-206ENST00000587673 MRC2Q9UBG0 1479 aa43.24■■■■■ 4.51
SBNO2-206ENST00000587673 FANCD2Q9BXW9 1451 aa43.2■■■■■ 4.51
SBNO2-206ENST00000587673 CCDC88BA6NC98 1476 aa43.18■■■■■ 4.5
SBNO2-206ENST00000587673 CEP164Q9UPV0 1460 aa43.16■■■■■ 4.5
SBNO2-206ENST00000587673 WDR62O43379 1518 aa43.12■■■■■ 4.49
SBNO2-206ENST00000587673 PRDM2Q13029 1718 aa42.89■■■■■ 4.46
SBNO2-206ENST00000587673 URB2Q14146 1524 aaKnown RBP42.89■■■■■ 4.46
SBNO2-206ENST00000587673 SUPT5HO00267 1087 aaKnown RBP42.47■■■■■ 4.39
SBNO2-206ENST00000587673 TOPBP1Q92547 1522 aa42.46■■■■■ 4.39
SBNO2-206ENST00000587673 DNMBPQ6XZF7 1577 aa42.31■■■■■ 4.36
SBNO2-206ENST00000587673 ZNF608Q9ULD9 1512 aaPredicted RBP42.31■■■■■ 4.36
SBNO2-206ENST00000587673 IFT140Q96RY7 1462 aa42.25■■■■■ 4.35
SBNO2-206ENST00000587673 ABCC8Q09428 1581 aa42.23■■■■■ 4.35
SBNO2-206ENST00000587673 TARBP1Q13395 1621 aaKnown RBP42.08■■■■■ 4.33
SBNO2-206ENST00000587673 POLA1P09884 1462 aaPredicted RBP42.07■■■■■ 4.33
SBNO2-206ENST00000587673 EIF4G3O43432 1585 aaKnown RBP42.02■■■■■ 4.32
SBNO2-206ENST00000587673 RAD54L2Q9Y4B4 1467 aa41.99■■■■■ 4.31
SBNO2-206ENST00000587673 OSCARQ8IYS5 282 aa41.99■■■■■ 4.31
SBNO2-206ENST00000587673 CUX1P39880 1505 aa41.98■■■■■ 4.31
SBNO2-206ENST00000587673 AQRO60306 1485 aaKnown RBP eCLIP41.98■■■■■ 4.318e-7■■□□□ 14.2
SBNO2-206ENST00000587673 FGD5Q6ZNL6 1462 aa41.89■■■■■ 4.3
SBNO2-206ENST00000587673 SOGA1O94964 1423 aa41.86■■■■■ 4.29
SBNO2-206ENST00000587673 TDRD9Q8NDG6 1382 aaKnown RBP41.79■■■■■ 4.28
SBNO2-206ENST00000587673 TRIM41Q8WV44 630 aa41.75■■■■■ 4.27
SBNO2-206ENST00000587673 CHD1O14646 1710 aa41.66■■■■■ 4.26
SBNO2-206ENST00000587673 WDR97A6NE52 1622 aa41.57■■■■■ 4.25
SBNO2-206ENST00000587673 FBLN2P98095 1184 aa41.55■■■■■ 4.24
SBNO2-206ENST00000587673 SNAPC4Q5SXM2 1469 aa41.51■■■■■ 4.24
SBNO2-206ENST00000587673 RIMBP3CA6NJZ7 1639 aa41.48■■■■■ 4.23
SBNO2-206ENST00000587673 RIMBP3BA6NNM3 1639 aa41.48■■■■■ 4.23
SBNO2-206ENST00000587673 RIMBP3Q9UFD9 1639 aa41.48■■■■■ 4.23
SBNO2-206ENST00000587673 SYNJ1O43426 1573 aa41.44■■■■■ 4.22
SBNO2-206ENST00000587673 GRIN2BQ13224 1484 aa41.4■■■■■ 4.22
SBNO2-206ENST00000587673 WRNQ14191 1432 aaPredicted RBP eCLIP41.39■■■■■ 4.22
SBNO2-206ENST00000587673 ABCA10Q8WWZ4 1543 aa41.39■■■■■ 4.22
SBNO2-206ENST00000587673 TOP2BQ02880 1626 aa41.37■■■■■ 4.21
SBNO2-206ENST00000587673 BIVM-ERCC5R4GMW8 1640 aa41.37■■■■■ 4.21
SBNO2-206ENST00000587673 ARHGEF11O15085 1522 aa41.37■■■■■ 4.21
SBNO2-206ENST00000587673 GAPVD1Q14C86 1478 aa41.35■■■■■ 4.21
SBNO2-206ENST00000587673 PBRM1Q86U86 1689 aa41.35■■■■■ 4.21
SBNO2-206ENST00000587673 ABCA5Q8WWZ7 1642 aa41.32■■■■■ 4.2
SBNO2-206ENST00000587673 MAGI1Q96QZ7 1491 aaPredicted RBP41.31■■■■■ 4.2
SBNO2-206ENST00000587673 CHMP7Q8WUX9 453 aaPredicted RBP41.26■■■■■ 4.2
SBNO2-206ENST00000587673 SYNJ2O15056 1496 aa41.21■■■■■ 4.19
SBNO2-206ENST00000587673 CLASP1Q7Z460 1538 aa41.14■■■■■ 4.18
SBNO2-206ENST00000587673 CYB5RLQ6IPT4 315 aa41.07■■■■■ 4.17
SBNO2-206ENST00000587673 ARAP1Q96P48 1450 aa41.04■■■■■ 4.16
SBNO2-206ENST00000587673 ADAMTS12P58397 1594 aa40.96■■■■■ 4.15
SBNO2-206ENST00000587673 GRIN2AQ12879 1464 aa40.9■■■■■ 4.14
SBNO2-206ENST00000587673 ERICH3Q5RHP9 1530 aa40.84■■■■■ 4.13
SBNO2-206ENST00000587673 FHAD1B1AJZ9 1412 aa40.82■■■■■ 4.12
SBNO2-206ENST00000587673 CEP170Q5SW79 1584 aa40.81■■■■■ 4.12
SBNO2-206ENST00000587673 NUP160Q12769 1436 aa40.74■■■■■ 4.11
SBNO2-206ENST00000587673 ERCC6L2Q5T890 1561 aa40.69■■■■■ 4.1
SBNO2-206ENST00000587673 IGF1RP08069 1367 aa40.55■■■■■ 4.08
SBNO2-206ENST00000587673 KIF27Q86VH2 1401 aa40.52■■■■■ 4.08
SBNO2-206ENST00000587673 SHROOM2Q13796 1616 aa40.52■■■■■ 4.08
SBNO2-206ENST00000587673 TRHP20396 242 aaPredicted RBP40.41■■■■■ 4.06
SBNO2-206ENST00000587673 RUSC2Q8N2Y8 1516 aa40.38■■■■■ 4.06
SBNO2-206ENST00000587673 CUL7Q14999 1698 aa40.34■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms