RNA–Protein interactions for RNA: ENST00000587632.1

TINCR-202, Transcript of TINCR ubiquitin domain containing, humanhuman

TSL 3

Gene TINCR, Length 402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINCR-202ENST00000587632 NISCHQ9Y2I1 1504 aa29.4■■■□□ 2.3
TINCR-202ENST00000587632 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
TINCR-202ENST00000587632 ABCC9O60706 1549 aa26.24■■□□□ 1.79
TINCR-202ENST00000587632 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
TINCR-202ENST00000587632 NACADO15069 1562 aa24.8■■□□□ 1.56
TINCR-202ENST00000587632 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
TINCR-202ENST00000587632 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
TINCR-202ENST00000587632 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
TINCR-202ENST00000587632 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
TINCR-202ENST00000587632 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
TINCR-202ENST00000587632 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
TINCR-202ENST00000587632 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
TINCR-202ENST00000587632 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
TINCR-202ENST00000587632 SCRIBQ14160 1630 aa24■■□□□ 1.43
TINCR-202ENST00000587632 SHROOM4Q9ULL8 1493 aa23.82■■□□□ 1.4
TINCR-202ENST00000587632 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
TINCR-202ENST00000587632 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
TINCR-202ENST00000587632 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
TINCR-202ENST00000587632 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
TINCR-202ENST00000587632 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
TINCR-202ENST00000587632 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
TINCR-202ENST00000587632 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
TINCR-202ENST00000587632 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
TINCR-202ENST00000587632 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
TINCR-202ENST00000587632 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
TINCR-202ENST00000587632 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
TINCR-202ENST00000587632 NESP48681 1621 aa22.65■■□□□ 1.22
TINCR-202ENST00000587632 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
TINCR-202ENST00000587632 ERCC6Q03468 1493 aa22.5■■□□□ 1.19
TINCR-202ENST00000587632 CUX2O14529 1486 aa22.47■■□□□ 1.19
TINCR-202ENST00000587632 WIZO95785 1651 aa22.45■■□□□ 1.18
TINCR-202ENST00000587632 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
TINCR-202ENST00000587632 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
TINCR-202ENST00000587632 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
TINCR-202ENST00000587632 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
TINCR-202ENST00000587632 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
TINCR-202ENST00000587632 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
TINCR-202ENST00000587632 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
TINCR-202ENST00000587632 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
TINCR-202ENST00000587632 WDR62O43379 1518 aa22.04■■□□□ 1.12
TINCR-202ENST00000587632 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
TINCR-202ENST00000587632 CFTRP13569 1480 aa22.03■■□□□ 1.12
TINCR-202ENST00000587632 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
TINCR-202ENST00000587632 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
TINCR-202ENST00000587632 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
TINCR-202ENST00000587632 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
TINCR-202ENST00000587632 PRDM2Q13029 1718 aa21.8■■□□□ 1.08
TINCR-202ENST00000587632 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
TINCR-202ENST00000587632 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
TINCR-202ENST00000587632 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
TINCR-202ENST00000587632 DNMBPQ6XZF7 1577 aa21.49■■□□□ 1.03
TINCR-202ENST00000587632 TARBP1Q13395 1621 aaKnown RBP21.46■■□□□ 1.03
TINCR-202ENST00000587632 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
TINCR-202ENST00000587632 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
TINCR-202ENST00000587632 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
TINCR-202ENST00000587632 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
TINCR-202ENST00000587632 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
TINCR-202ENST00000587632 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
TINCR-202ENST00000587632 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
TINCR-202ENST00000587632 CUX1P39880 1505 aa21.32■■□□□ 1
TINCR-202ENST00000587632 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
TINCR-202ENST00000587632 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
TINCR-202ENST00000587632 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
TINCR-202ENST00000587632 CHD1O14646 1710 aa21.27■■□□□ 1
TINCR-202ENST00000587632 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
TINCR-202ENST00000587632 SOGA1O94964 1423 aa21.24■□□□□ 0.99
TINCR-202ENST00000587632 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
TINCR-202ENST00000587632 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
TINCR-202ENST00000587632 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
TINCR-202ENST00000587632 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
TINCR-202ENST00000587632 SNAPC4Q5SXM2 1469 aa21.12■□□□□ 0.97
TINCR-202ENST00000587632 FBLN2P98095 1184 aa21.06■□□□□ 0.96
TINCR-202ENST00000587632 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
TINCR-202ENST00000587632 ARAP1Q96P48 1450 aa21.04■□□□□ 0.96
TINCR-202ENST00000587632 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
TINCR-202ENST00000587632 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
TINCR-202ENST00000587632 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.96
TINCR-202ENST00000587632 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
TINCR-202ENST00000587632 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
TINCR-202ENST00000587632 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
TINCR-202ENST00000587632 CYB5RLQ6IPT4 315 aa20.99■□□□□ 0.95
TINCR-202ENST00000587632 GAPVD1Q14C86 1478 aa20.98■□□□□ 0.95
TINCR-202ENST00000587632 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
TINCR-202ENST00000587632 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
TINCR-202ENST00000587632 TOP2BQ02880 1626 aa20.94■□□□□ 0.94
TINCR-202ENST00000587632 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
TINCR-202ENST00000587632 WRNQ14191 1432 aaPredicted RBP eCLIP20.89■□□□□ 0.94
TINCR-202ENST00000587632 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
TINCR-202ENST00000587632 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
TINCR-202ENST00000587632 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
TINCR-202ENST00000587632 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
TINCR-202ENST00000587632 NUP160Q12769 1436 aa20.75■□□□□ 0.91
TINCR-202ENST00000587632 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
TINCR-202ENST00000587632 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
TINCR-202ENST00000587632 SHROOM2Q13796 1616 aa20.69■□□□□ 0.9
TINCR-202ENST00000587632 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
TINCR-202ENST00000587632 IGF1RP08069 1367 aa20.55■□□□□ 0.88
TINCR-202ENST00000587632 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
TINCR-202ENST00000587632 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
TINCR-202ENST00000587632 JPH4Q96JJ6 628 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms