RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
SDF2-205ENST00000587629 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
SDF2-205ENST00000587629 CHIC1Q5VXU3 224 aa15.35■□□□□ 0.05
SDF2-205ENST00000587629 ABCC9O60706 1549 aa14.48□□□□□ -0.09
SDF2-205ENST00000587629 CCDC180Q9P1Z9 1646 aa14.31□□□□□ -0.12
SDF2-205ENST00000587629 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
SDF2-205ENST00000587629 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
SDF2-205ENST00000587629 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
SDF2-205ENST00000587629 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
SDF2-205ENST00000587629 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
SDF2-205ENST00000587629 NACADO15069 1562 aa13.58□□□□□ -0.24
SDF2-205ENST00000587629 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
SDF2-205ENST00000587629 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
SDF2-205ENST00000587629 MYO15BQ96JP2 1530 aa13.33□□□□□ -0.28
SDF2-205ENST00000587629 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
SDF2-205ENST00000587629 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
SDF2-205ENST00000587629 FOXD1Q16676 465 aa13.22□□□□□ -0.29
SDF2-205ENST00000587629 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
SDF2-205ENST00000587629 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
SDF2-205ENST00000587629 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
SDF2-205ENST00000587629 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
SDF2-205ENST00000587629 CC2D2AQ9P2K1 1620 aa13.03□□□□□ -0.32
SDF2-205ENST00000587629 CECR2Q9BXF3 1484 aa13.02□□□□□ -0.33
SDF2-205ENST00000587629 EIF4G1Q04637 1599 aaKnown RBP12.98□□□□□ -0.33
SDF2-205ENST00000587629 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
SDF2-205ENST00000587629 MSH5O43196 834 aa12.54□□□□□ -0.4
SDF2-205ENST00000587629 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
SDF2-205ENST00000587629 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
SDF2-205ENST00000587629 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
SDF2-205ENST00000587629 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
SDF2-205ENST00000587629 SMARCA2P51531 1590 aa12.46□□□□□ -0.42
SDF2-205ENST00000587629 NESP48681 1621 aa12.43□□□□□ -0.42
SDF2-205ENST00000587629 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
SDF2-205ENST00000587629 CUX2O14529 1486 aa12.41□□□□□ -0.42
SDF2-205ENST00000587629 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
SDF2-205ENST00000587629 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
SDF2-205ENST00000587629 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
SDF2-205ENST00000587629 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
SDF2-205ENST00000587629 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
SDF2-205ENST00000587629 LAMC3Q9Y6N6 1575 aa12.25□□□□□ -0.45
SDF2-205ENST00000587629 THOC2Q8NI27 1593 aaKnown RBP12.23□□□□□ -0.45
SDF2-205ENST00000587629 PDS5BQ9NTI5 1447 aa12.22□□□□□ -0.45
SDF2-205ENST00000587629 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
SDF2-205ENST00000587629 WIZO95785 1651 aa12.21□□□□□ -0.45
SDF2-205ENST00000587629 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
SDF2-205ENST00000587629 MRC2Q9UBG0 1479 aa12.12□□□□□ -0.47
SDF2-205ENST00000587629 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
SDF2-205ENST00000587629 CEP164Q9UPV0 1460 aa12.07□□□□□ -0.48
SDF2-205ENST00000587629 WDR62O43379 1518 aa12.06□□□□□ -0.48
SDF2-205ENST00000587629 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
SDF2-205ENST00000587629 CFTRP13569 1480 aa12.03□□□□□ -0.48
SDF2-205ENST00000587629 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
SDF2-205ENST00000587629 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.48
SDF2-205ENST00000587629 PPP6R1Q9UPN7 881 aa11.99□□□□□ -0.49
SDF2-205ENST00000587629 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
SDF2-205ENST00000587629 ADRA2BP18089 450 aa11.94□□□□□ -0.5
SDF2-205ENST00000587629 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
SDF2-205ENST00000587629 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
SDF2-205ENST00000587629 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
SDF2-205ENST00000587629 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
SDF2-205ENST00000587629 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
SDF2-205ENST00000587629 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
SDF2-205ENST00000587629 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
SDF2-205ENST00000587629 ABCC8Q09428 1581 aa11.75□□□□□ -0.53
SDF2-205ENST00000587629 AQRO60306 1485 aaKnown RBP eCLIP11.75□□□□□ -0.53
SDF2-205ENST00000587629 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
SDF2-205ENST00000587629 FBLN2P98095 1184 aa11.74□□□□□ -0.53
SDF2-205ENST00000587629 EIF4G3O43432 1585 aaKnown RBP11.73□□□□□ -0.53
SDF2-205ENST00000587629 RIMBP3CA6NJZ7 1639 aa11.72□□□□□ -0.53
SDF2-205ENST00000587629 RIMBP3BA6NNM3 1639 aa11.72□□□□□ -0.53
SDF2-205ENST00000587629 RIMBP3Q9UFD9 1639 aa11.72□□□□□ -0.53
SDF2-205ENST00000587629 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
SDF2-205ENST00000587629 TARBP1Q13395 1621 aaKnown RBP11.7□□□□□ -0.54
SDF2-205ENST00000587629 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
SDF2-205ENST00000587629 TDRD9Q8NDG6 1382 aaKnown RBP11.69□□□□□ -0.54
SDF2-205ENST00000587629 CYB5RLQ6IPT4 315 aa11.69□□□□□ -0.54
SDF2-205ENST00000587629 ARHGEF11O15085 1522 aa11.68□□□□□ -0.54
SDF2-205ENST00000587629 SOGA1O94964 1423 aa11.68□□□□□ -0.54
SDF2-205ENST00000587629 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
SDF2-205ENST00000587629 CHD1O14646 1710 aa11.65□□□□□ -0.54
SDF2-205ENST00000587629 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
SDF2-205ENST00000587629 CUX1P39880 1505 aa11.61□□□□□ -0.55
SDF2-205ENST00000587629 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
SDF2-205ENST00000587629 SNAPC4Q5SXM2 1469 aa11.6□□□□□ -0.55
SDF2-205ENST00000587629 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
SDF2-205ENST00000587629 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
SDF2-205ENST00000587629 GRIN2BQ13224 1484 aa11.55□□□□□ -0.56
SDF2-205ENST00000587629 MAGI1Q96QZ7 1491 aaPredicted RBP11.52□□□□□ -0.56
SDF2-205ENST00000587629 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
SDF2-205ENST00000587629 WDR97A6NE52 1622 aa11.51□□□□□ -0.57
SDF2-205ENST00000587629 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
SDF2-205ENST00000587629 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
SDF2-205ENST00000587629 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
SDF2-205ENST00000587629 PBRM1Q86U86 1689 aa11.47□□□□□ -0.57
SDF2-205ENST00000587629 ABCA10Q8WWZ4 1543 aa11.46□□□□□ -0.57
SDF2-205ENST00000587629 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
SDF2-205ENST00000587629 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
SDF2-205ENST00000587629 GRIN2AQ12879 1464 aa11.39□□□□□ -0.59
SDF2-205ENST00000587629 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
SDF2-205ENST00000587629 ERCC6L2Q5T890 1561 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms