RNA–Protein interactions for RNA: ENST00000587579.1

SNRPD2-205, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 5

Gene SNRPD2, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-205ENST00000587579 NISCHQ9Y2I1 1504 aa32.03■■■□□ 2.72
SNRPD2-205ENST00000587579 ABCC9O60706 1549 aa28.81■■■□□ 2.2
SNRPD2-205ENST00000587579 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
SNRPD2-205ENST00000587579 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
SNRPD2-205ENST00000587579 NACADO15069 1562 aa27.12■■□□□ 1.93
SNRPD2-205ENST00000587579 DCAF8L2P0C7V8 631 aa27.09■■□□□ 1.93
SNRPD2-205ENST00000587579 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
SNRPD2-205ENST00000587579 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
SNRPD2-205ENST00000587579 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
SNRPD2-205ENST00000587579 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
SNRPD2-205ENST00000587579 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
SNRPD2-205ENST00000587579 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
SNRPD2-205ENST00000587579 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
SNRPD2-205ENST00000587579 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
SNRPD2-205ENST00000587579 SHROOM4Q9ULL8 1493 aa26.05■■□□□ 1.76
SNRPD2-205ENST00000587579 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
SNRPD2-205ENST00000587579 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
SNRPD2-205ENST00000587579 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
SNRPD2-205ENST00000587579 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
SNRPD2-205ENST00000587579 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
SNRPD2-205ENST00000587579 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
SNRPD2-205ENST00000587579 SMARCA2P51531 1590 aa24.89■■□□□ 1.58
SNRPD2-205ENST00000587579 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
SNRPD2-205ENST00000587579 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
SNRPD2-205ENST00000587579 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
SNRPD2-205ENST00000587579 NESP48681 1621 aa24.79■■□□□ 1.56
SNRPD2-205ENST00000587579 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
SNRPD2-205ENST00000587579 DNAJC5Q9H3Z4 198 aa24.74■■□□□ 1.55
SNRPD2-205ENST00000587579 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
SNRPD2-205ENST00000587579 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
SNRPD2-205ENST00000587579 CUX2O14529 1486 aa24.7■■□□□ 1.55
SNRPD2-205ENST00000587579 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
SNRPD2-205ENST00000587579 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
SNRPD2-205ENST00000587579 WIZO95785 1651 aa24.47■■□□□ 1.51
SNRPD2-205ENST00000587579 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
SNRPD2-205ENST00000587579 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
SNRPD2-205ENST00000587579 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
SNRPD2-205ENST00000587579 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
SNRPD2-205ENST00000587579 MRC2Q9UBG0 1479 aa24.15■■□□□ 1.46
SNRPD2-205ENST00000587579 WDR62O43379 1518 aa24.1■■□□□ 1.45
SNRPD2-205ENST00000587579 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.45
SNRPD2-205ENST00000587579 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
SNRPD2-205ENST00000587579 FANCD2Q9BXW9 1451 aa24.05■■□□□ 1.44
SNRPD2-205ENST00000587579 CFTRP13569 1480 aa24.02■■□□□ 1.44
SNRPD2-205ENST00000587579 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.42
SNRPD2-205ENST00000587579 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
SNRPD2-205ENST00000587579 PRDM2Q13029 1718 aa23.83■■□□□ 1.41
SNRPD2-205ENST00000587579 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
SNRPD2-205ENST00000587579 ZNF608Q9ULD9 1512 aaPredicted RBP23.63■■□□□ 1.37
SNRPD2-205ENST00000587579 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
SNRPD2-205ENST00000587579 OSCARQ8IYS5 282 aa23.59■■□□□ 1.37
SNRPD2-205ENST00000587579 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
SNRPD2-205ENST00000587579 DNMBPQ6XZF7 1577 aa23.5■■□□□ 1.35
SNRPD2-205ENST00000587579 EIF4G3O43432 1585 aaKnown RBP23.47■■□□□ 1.35
SNRPD2-205ENST00000587579 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
SNRPD2-205ENST00000587579 TARBP1Q13395 1621 aaKnown RBP23.42■■□□□ 1.34
SNRPD2-205ENST00000587579 AQRO60306 1485 aaKnown RBP eCLIP23.39■■□□□ 1.34
SNRPD2-205ENST00000587579 RIMBP3CA6NJZ7 1639 aa23.39■■□□□ 1.33
SNRPD2-205ENST00000587579 RIMBP3BA6NNM3 1639 aa23.39■■□□□ 1.33
SNRPD2-205ENST00000587579 RIMBP3Q9UFD9 1639 aa23.39■■□□□ 1.33
SNRPD2-205ENST00000587579 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
SNRPD2-205ENST00000587579 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
SNRPD2-205ENST00000587579 CHD1O14646 1710 aa23.33■■□□□ 1.32
SNRPD2-205ENST00000587579 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
SNRPD2-205ENST00000587579 SOGA1O94964 1423 aa23.25■■□□□ 1.31
SNRPD2-205ENST00000587579 CUX1P39880 1505 aa23.24■■□□□ 1.31
SNRPD2-205ENST00000587579 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
SNRPD2-205ENST00000587579 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
SNRPD2-205ENST00000587579 FBLN2P98095 1184 aa23.21■■□□□ 1.31
SNRPD2-205ENST00000587579 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
SNRPD2-205ENST00000587579 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
SNRPD2-205ENST00000587579 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
SNRPD2-205ENST00000587579 WDR97A6NE52 1622 aa23.08■■□□□ 1.29
SNRPD2-205ENST00000587579 ARAP1Q96P48 1450 aa23.07■■□□□ 1.28
SNRPD2-205ENST00000587579 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
SNRPD2-205ENST00000587579 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
SNRPD2-205ENST00000587579 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
SNRPD2-205ENST00000587579 MAGI1Q96QZ7 1491 aaPredicted RBP23■■□□□ 1.27
SNRPD2-205ENST00000587579 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
SNRPD2-205ENST00000587579 GAPVD1Q14C86 1478 aa22.96■■□□□ 1.27
SNRPD2-205ENST00000587579 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
SNRPD2-205ENST00000587579 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
SNRPD2-205ENST00000587579 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
SNRPD2-205ENST00000587579 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
SNRPD2-205ENST00000587579 TRHP20396 242 aaPredicted RBP22.84■■□□□ 1.25
SNRPD2-205ENST00000587579 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
SNRPD2-205ENST00000587579 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
SNRPD2-205ENST00000587579 WRNQ14191 1432 aaPredicted RBP eCLIP22.81■■□□□ 1.24
SNRPD2-205ENST00000587579 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
SNRPD2-205ENST00000587579 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
SNRPD2-205ENST00000587579 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
SNRPD2-205ENST00000587579 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
SNRPD2-205ENST00000587579 NUP160Q12769 1436 aa22.65■■□□□ 1.22
SNRPD2-205ENST00000587579 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
SNRPD2-205ENST00000587579 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
SNRPD2-205ENST00000587579 SHROOM2Q13796 1616 aa22.58■■□□□ 1.21
SNRPD2-205ENST00000587579 PRG4Q92954 1404 aaPredicted RBP22.46■■□□□ 1.19
SNRPD2-205ENST00000587579 RUSC2Q8N2Y8 1516 aa22.44■■□□□ 1.18
SNRPD2-205ENST00000587579 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
SNRPD2-205ENST00000587579 IGF1RP08069 1367 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms