RNA–Protein interactions for RNA: ENST00000587578.1

SOCS3-202, Transcript of suppressor of cytokine signaling 3, humanhuman

TSL 4

Gene SOCS3, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-202ENST00000587578 NISCHQ9Y2I1 1504 aa45.25■■■■■ 4.83
SOCS3-202ENST00000587578 ABCC9O60706 1549 aa41.04■■■■■ 4.16
SOCS3-202ENST00000587578 CCDC180Q9P1Z9 1646 aa40.71■■■■■ 4.11
SOCS3-202ENST00000587578 RB1CC1Q8TDY2 1594 aa38.88■■■■□ 3.81
SOCS3-202ENST00000587578 DNAJC5BQ9UF47 199 aa38.79■■■■□ 3.8
SOCS3-202ENST00000587578 NACADO15069 1562 aa38.53■■■■□ 3.76
SOCS3-202ENST00000587578 DCAF8L2P0C7V8 631 aa38.27■■■■□ 3.72
SOCS3-202ENST00000587578 PABPN1Q86U42 306 aaKnown RBP eCLIP38.16■■■■□ 3.7
SOCS3-202ENST00000587578 UNC13AQ9UPW8 1703 aa38.11■■■■□ 3.69
SOCS3-202ENST00000587578 MYO15BQ96JP2 1530 aa37.88■■■■□ 3.65
SOCS3-202ENST00000587578 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
SOCS3-202ENST00000587578 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
SOCS3-202ENST00000587578 DCAF1Q9Y4B6 1507 aa37.31■■■■□ 3.56
SOCS3-202ENST00000587578 SHROOM4Q9ULL8 1493 aa37.19■■■■□ 3.54
SOCS3-202ENST00000587578 SCRIBQ14160 1630 aa37.14■■■■□ 3.54
SOCS3-202ENST00000587578 CC2D2AQ9P2K1 1620 aa37.06■■■■□ 3.52
SOCS3-202ENST00000587578 CECR2Q9BXF3 1484 aa36.98■■■■□ 3.51
SOCS3-202ENST00000587578 EIF4G1Q04637 1599 aaKnown RBP36.9■■■■□ 3.5
SOCS3-202ENST00000587578 DNAJC5Q9H3Z4 198 aa35.74■■■■□ 3.31
SOCS3-202ENST00000587578 NCAPD3P42695 1498 aa35.59■■■■□ 3.29
SOCS3-202ENST00000587578 ATAD2BQ9ULI0 1458 aa35.47■■■■□ 3.27
SOCS3-202ENST00000587578 CUX2O14529 1486 aa35.43■■■■□ 3.26
SOCS3-202ENST00000587578 ERCC6Q03468 1493 aa35.41■■■■□ 3.26
SOCS3-202ENST00000587578 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
SOCS3-202ENST00000587578 SMARCA2P51531 1590 aa35.32■■■■□ 3.24
SOCS3-202ENST00000587578 HMGXB3Q12766 1538 aa35.32■■■■□ 3.24
SOCS3-202ENST00000587578 NESP48681 1621 aa35.21■■■■□ 3.23
SOCS3-202ENST00000587578 BAZ1AQ9NRL2 1556 aaPredicted RBP35.11■■■■□ 3.21
SOCS3-202ENST00000587578 BAZ1BQ9UIG0 1483 aaKnown RBP35.09■■■■□ 3.21
SOCS3-202ENST00000587578 PEG3Q9GZU2 1588 aa35.01■■■■□ 3.2
SOCS3-202ENST00000587578 MROH2BQ7Z745 1585 aa34.9■■■■□ 3.18
SOCS3-202ENST00000587578 THOC2Q8NI27 1593 aaKnown RBP34.9■■■■□ 3.18
SOCS3-202ENST00000587578 LAMC3Q9Y6N6 1575 aa34.83■■■■□ 3.17
SOCS3-202ENST00000587578 KIF21AQ7Z4S6 1674 aa34.75■■■■□ 3.15
SOCS3-202ENST00000587578 PDS5BQ9NTI5 1447 aa34.6■■■■□ 3.13
SOCS3-202ENST00000587578 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
SOCS3-202ENST00000587578 WIZO95785 1651 aa34.47■■■■□ 3.11
SOCS3-202ENST00000587578 MRC2Q9UBG0 1479 aa34.38■■■■□ 3.09
SOCS3-202ENST00000587578 WDR62O43379 1518 aa34.32■■■■□ 3.08
SOCS3-202ENST00000587578 CEP164Q9UPV0 1460 aa34.18■■■■□ 3.06
SOCS3-202ENST00000587578 FANCD2Q9BXW9 1451 aa34.13■■■■□ 3.05
SOCS3-202ENST00000587578 TRIM41Q8WV44 630 aa34.09■■■■□ 3.05
SOCS3-202ENST00000587578 CFTRP13569 1480 aa34.06■■■■□ 3.04
SOCS3-202ENST00000587578 RSF1Q96T23 1441 aaPredicted RBP34.04■■■■□ 3.04
SOCS3-202ENST00000587578 TOP2AP11388 1531 aaKnown RBP33.98■■■■□ 3.03
SOCS3-202ENST00000587578 URB2Q14146 1524 aaKnown RBP33.9■■■■□ 3.02
SOCS3-202ENST00000587578 OSCARQ8IYS5 282 aa33.73■■■□□ 2.99
SOCS3-202ENST00000587578 PRDM2Q13029 1718 aa33.72■■■□□ 2.99
SOCS3-202ENST00000587578 CCDC88BA6NC98 1476 aa33.6■■■□□ 2.97
SOCS3-202ENST00000587578 ZNF608Q9ULD9 1512 aaPredicted RBP33.54■■■□□ 2.96
SOCS3-202ENST00000587578 IFT140Q96RY7 1462 aa33.49■■■□□ 2.95
SOCS3-202ENST00000587578 TOPBP1Q92547 1522 aa33.46■■■□□ 2.95
SOCS3-202ENST00000587578 RIMBP3CA6NJZ7 1639 aa33.42■■■□□ 2.94
SOCS3-202ENST00000587578 RIMBP3BA6NNM3 1639 aa33.42■■■□□ 2.94
SOCS3-202ENST00000587578 RIMBP3Q9UFD9 1639 aa33.42■■■□□ 2.94
SOCS3-202ENST00000587578 EIF4G3O43432 1585 aaKnown RBP33.34■■■□□ 2.93
SOCS3-202ENST00000587578 DNMBPQ6XZF7 1577 aa33.3■■■□□ 2.92
SOCS3-202ENST00000587578 ARHGEF11O15085 1522 aa33.28■■■□□ 2.92
SOCS3-202ENST00000587578 ABCC8Q09428 1581 aa33.27■■■□□ 2.92
SOCS3-202ENST00000587578 TARBP1Q13395 1621 aaKnown RBP33.21■■■□□ 2.91
SOCS3-202ENST00000587578 AQRO60306 1485 aaKnown RBP eCLIP33.18■■■□□ 2.9
SOCS3-202ENST00000587578 CHD1O14646 1710 aa33.16■■■□□ 2.9
SOCS3-202ENST00000587578 POLA1P09884 1462 aaPredicted RBP33.11■■■□□ 2.89
SOCS3-202ENST00000587578 RAD54L2Q9Y4B4 1467 aa33.01■■■□□ 2.88
SOCS3-202ENST00000587578 CYB5RLQ6IPT4 315 aa33■■■□□ 2.87
SOCS3-202ENST00000587578 FBLN2P98095 1184 aa32.97■■■□□ 2.87
SOCS3-202ENST00000587578 ARAP1Q96P48 1450 aa32.95■■■□□ 2.87
SOCS3-202ENST00000587578 TDRD9Q8NDG6 1382 aaKnown RBP32.92■■■□□ 2.86
SOCS3-202ENST00000587578 SOGA1O94964 1423 aa32.9■■■□□ 2.86
SOCS3-202ENST00000587578 FGD5Q6ZNL6 1462 aa32.86■■■□□ 2.85
SOCS3-202ENST00000587578 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
SOCS3-202ENST00000587578 CUX1P39880 1505 aa32.81■■■□□ 2.84
SOCS3-202ENST00000587578 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
SOCS3-202ENST00000587578 WDR97A6NE52 1622 aa32.76■■■□□ 2.83
SOCS3-202ENST00000587578 CLASP1Q7Z460 1538 aa32.75■■■□□ 2.83
SOCS3-202ENST00000587578 TRHP20396 242 aaPredicted RBP32.71■■■□□ 2.83
SOCS3-202ENST00000587578 MAGI1Q96QZ7 1491 aaPredicted RBP32.68■■■□□ 2.82
SOCS3-202ENST00000587578 GRIN2BQ13224 1484 aa32.66■■■□□ 2.82
SOCS3-202ENST00000587578 CHMP7Q8WUX9 453 aaPredicted RBP32.65■■■□□ 2.82
SOCS3-202ENST00000587578 SYNJ1O43426 1573 aa32.65■■■□□ 2.82
SOCS3-202ENST00000587578 SYNJ2O15056 1496 aa32.6■■■□□ 2.81
SOCS3-202ENST00000587578 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
SOCS3-202ENST00000587578 GAPVD1Q14C86 1478 aa32.51■■■□□ 2.79
SOCS3-202ENST00000587578 ABCA5Q8WWZ7 1642 aa32.46■■■□□ 2.79
SOCS3-202ENST00000587578 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
SOCS3-202ENST00000587578 ERCC6L2Q5T890 1561 aa32.27■■■□□ 2.76
SOCS3-202ENST00000587578 GRIN2AQ12879 1464 aa32.26■■■□□ 2.75
SOCS3-202ENST00000587578 ADAMTS12P58397 1594 aa32.24■■■□□ 2.75
SOCS3-202ENST00000587578 WRNQ14191 1432 aaPredicted RBP eCLIP32.23■■■□□ 2.75
SOCS3-202ENST00000587578 CEP170Q5SW79 1584 aa32.2■■■□□ 2.75
SOCS3-202ENST00000587578 BIVM-ERCC5R4GMW8 1640 aa32.18■■■□□ 2.74
SOCS3-202ENST00000587578 TOP2BQ02880 1626 aa32.17■■■□□ 2.74
SOCS3-202ENST00000587578 NUP160Q12769 1436 aa32.17■■■□□ 2.74
SOCS3-202ENST00000587578 SHROOM2Q13796 1616 aa32.08■■■□□ 2.73
SOCS3-202ENST00000587578 FHAD1B1AJZ9 1412 aa32.07■■■□□ 2.72
SOCS3-202ENST00000587578 ERICH3Q5RHP9 1530 aa32.01■■■□□ 2.72
SOCS3-202ENST00000587578 AEBP2Q6ZN18 517 aaPredicted RBP31.93■■■□□ 2.7
SOCS3-202ENST00000587578 PRG4Q92954 1404 aaPredicted RBP31.88■■■□□ 2.69
SOCS3-202ENST00000587578 KIF13AQ9H1H9 1805 aa31.84■■■□□ 2.69
SOCS3-202ENST00000587578 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms