RNA–Protein interactions for RNA: ENST00000587566.5

MARK4-203, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 5

Gene MARK4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-203ENST00000587566 NISCHQ9Y2I1 1504 aa35.81■■■■□ 3.32
MARK4-203ENST00000587566 ABCC9O60706 1549 aa33.48■■■□□ 2.95
MARK4-203ENST00000587566 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
MARK4-203ENST00000587566 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
MARK4-203ENST00000587566 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
MARK4-203ENST00000587566 NACADO15069 1562 aa31■■■□□ 2.55
MARK4-203ENST00000587566 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.552e-8■■■■□ 24.9
MARK4-203ENST00000587566 UNC13AQ9UPW8 1703 aa30.9■■■□□ 2.54
MARK4-203ENST00000587566 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
MARK4-203ENST00000587566 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
MARK4-203ENST00000587566 DNAJC5Q9H3Z4 198 aa30.28■■■□□ 2.44
MARK4-203ENST00000587566 CECR2Q9BXF3 1484 aa30.25■■■□□ 2.43
MARK4-203ENST00000587566 CC2D2AQ9P2K1 1620 aa30.24■■■□□ 2.43
MARK4-203ENST00000587566 MYO15BQ96JP2 1530 aa30.23■■■□□ 2.43
MARK4-203ENST00000587566 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
MARK4-203ENST00000587566 EIF4G1Q04637 1599 aaKnown RBP29.92■■■□□ 2.38
MARK4-203ENST00000587566 SCRIBQ14160 1630 aa29.63■■■□□ 2.33
MARK4-203ENST00000587566 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
MARK4-203ENST00000587566 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
MARK4-203ENST00000587566 CUX2O14529 1486 aa29.23■■■□□ 2.27
MARK4-203ENST00000587566 ERCC6Q03468 1493 aa28.96■■■□□ 2.23
MARK4-203ENST00000587566 NCAPD3P42695 1498 aa28.6■■■□□ 2.17
MARK4-203ENST00000587566 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
MARK4-203ENST00000587566 NESP48681 1621 aa28.51■■■□□ 2.15
MARK4-203ENST00000587566 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
MARK4-203ENST00000587566 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
MARK4-203ENST00000587566 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
MARK4-203ENST00000587566 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
MARK4-203ENST00000587566 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
MARK4-203ENST00000587566 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
MARK4-203ENST00000587566 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
MARK4-203ENST00000587566 BAZ1BQ9UIG0 1483 aaKnown RBP28.07■■■□□ 2.08
MARK4-203ENST00000587566 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
MARK4-203ENST00000587566 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
MARK4-203ENST00000587566 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.05
MARK4-203ENST00000587566 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
MARK4-203ENST00000587566 WDR62O43379 1518 aa27.81■■■□□ 2.04
MARK4-203ENST00000587566 OSCARQ8IYS5 282 aa27.7■■■□□ 2.02
MARK4-203ENST00000587566 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
MARK4-203ENST00000587566 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
MARK4-203ENST00000587566 RIMBP3CA6NJZ7 1639 aa27.56■■■□□ 2
MARK4-203ENST00000587566 RIMBP3BA6NNM3 1639 aa27.56■■■□□ 2
MARK4-203ENST00000587566 RIMBP3Q9UFD9 1639 aa27.56■■■□□ 2
MARK4-203ENST00000587566 CEP164Q9UPV0 1460 aa27.51■■■□□ 2
MARK4-203ENST00000587566 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
MARK4-203ENST00000587566 ARHGEF11O15085 1522 aa27.32■■□□□ 1.96
MARK4-203ENST00000587566 WIZO95785 1651 aa27.27■■□□□ 1.96
MARK4-203ENST00000587566 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
MARK4-203ENST00000587566 CFTRP13569 1480 aa27.18■■□□□ 1.94
MARK4-203ENST00000587566 TRHP20396 242 aaPredicted RBP27.14■■□□□ 1.94
MARK4-203ENST00000587566 CYB5RLQ6IPT4 315 aa27.13■■□□□ 1.93
MARK4-203ENST00000587566 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
MARK4-203ENST00000587566 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
MARK4-203ENST00000587566 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
MARK4-203ENST00000587566 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
MARK4-203ENST00000587566 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
MARK4-203ENST00000587566 CHD1O14646 1710 aa26.95■■□□□ 1.9
MARK4-203ENST00000587566 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
MARK4-203ENST00000587566 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
MARK4-203ENST00000587566 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
MARK4-203ENST00000587566 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
MARK4-203ENST00000587566 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.863e-6■■■□□ 18.8
MARK4-203ENST00000587566 FBLN2P98095 1184 aa26.67■■□□□ 1.86
MARK4-203ENST00000587566 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
MARK4-203ENST00000587566 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
MARK4-203ENST00000587566 DNMBPQ6XZF7 1577 aa26.62■■□□□ 1.85
MARK4-203ENST00000587566 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
MARK4-203ENST00000587566 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
MARK4-203ENST00000587566 POLA1P09884 1462 aaPredicted RBP26.44■■□□□ 1.82
MARK4-203ENST00000587566 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
MARK4-203ENST00000587566 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
MARK4-203ENST00000587566 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
MARK4-203ENST00000587566 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
MARK4-203ENST00000587566 CHMP7Q8WUX9 453 aaPredicted RBP26.31■■□□□ 1.8
MARK4-203ENST00000587566 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
MARK4-203ENST00000587566 WDR97A6NE52 1622 aa26.29■■□□□ 1.8
MARK4-203ENST00000587566 SOGA1O94964 1423 aa26.28■■□□□ 1.8
MARK4-203ENST00000587566 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
MARK4-203ENST00000587566 SYNJ2O15056 1496 aa26.2■■□□□ 1.78
MARK4-203ENST00000587566 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
MARK4-203ENST00000587566 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.78
MARK4-203ENST00000587566 PBRM1Q86U86 1689 aa26.11■■□□□ 1.77
MARK4-203ENST00000587566 KIF13AQ9H1H9 1805 aa26.11■■□□□ 1.77
MARK4-203ENST00000587566 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
MARK4-203ENST00000587566 ILDR1Q86SU0 546 aaPredicted RBP26.03■■□□□ 1.76
MARK4-203ENST00000587566 CUX1P39880 1505 aa25.98■■□□□ 1.75
MARK4-203ENST00000587566 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
MARK4-203ENST00000587566 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
MARK4-203ENST00000587566 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
MARK4-203ENST00000587566 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
MARK4-203ENST00000587566 KDM4FA0A1W2PPD8 638 aa25.82■■□□□ 1.72
MARK4-203ENST00000587566 NUP160Q12769 1436 aa25.79■■□□□ 1.72
MARK4-203ENST00000587566 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
MARK4-203ENST00000587566 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
MARK4-203ENST00000587566 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
MARK4-203ENST00000587566 FAM69CQ0P6D2 419 aa25.71■■□□□ 1.71
MARK4-203ENST00000587566 KDM6BO15054 1643 aa25.7■■□□□ 1.71
MARK4-203ENST00000587566 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
MARK4-203ENST00000587566 DIP2BQ9P265 1576 aa25.67■■□□□ 1.7
MARK4-203ENST00000587566 TSPOAP1O95153 1857 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms