RNA–Protein interactions for RNA: ENST00000587564.2

SPRED3-205, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 1 (best)

Gene SPRED3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-205ENST00000587564 NISCHQ9Y2I1 1504 aa53.43■■■■■ 6.14
SPRED3-205ENST00000587564 ABCC9O60706 1549 aa48.2■■■■■ 5.31
SPRED3-205ENST00000587564 CCDC180Q9P1Z9 1646 aa48.05■■■■■ 5.28
SPRED3-205ENST00000587564 RB1CC1Q8TDY2 1594 aa45.81■■■■■ 4.92
SPRED3-205ENST00000587564 NACADO15069 1562 aa45.45■■■■■ 4.87
SPRED3-205ENST00000587564 DNAJC5BQ9UF47 199 aa45.25■■■■■ 4.83
SPRED3-205ENST00000587564 DCAF8L2P0C7V8 631 aa45.18■■■■■ 4.82
SPRED3-205ENST00000587564 PABPN1Q86U42 306 aaKnown RBP eCLIP44.81■■■■■ 4.76
SPRED3-205ENST00000587564 MYO15BQ96JP2 1530 aa44.75■■■■■ 4.75
SPRED3-205ENST00000587564 UNC13AQ9UPW8 1703 aa44.72■■■■■ 4.75
SPRED3-205ENST00000587564 BICRAQ9NZM4 1560 aa44.43■■■■■ 4.7
SPRED3-205ENST00000587564 ZCCHC6Q5VYS8 1495 aaKnown RBP44.27■■■■■ 4.68
SPRED3-205ENST00000587564 DCAF1Q9Y4B6 1507 aa44.12■■■■■ 4.65
SPRED3-205ENST00000587564 SHROOM4Q9ULL8 1493 aa43.88■■■■■ 4.61
SPRED3-205ENST00000587564 SCRIBQ14160 1630 aa43.79■■■■■ 4.6
SPRED3-205ENST00000587564 CC2D2AQ9P2K1 1620 aa43.51■■■■■ 4.56
SPRED3-205ENST00000587564 CECR2Q9BXF3 1484 aa43.43■■■■■ 4.54
SPRED3-205ENST00000587564 EIF4G1Q04637 1599 aaKnown RBP43.4■■■■■ 4.54
SPRED3-205ENST00000587564 NCAPD3P42695 1498 aa41.93■■■■■ 4.3
SPRED3-205ENST00000587564 ATAD2BQ9ULI0 1458 aa41.79■■■■■ 4.28
SPRED3-205ENST00000587564 SMARCA4P51532 1647 aa41.73■■■■■ 4.27
SPRED3-205ENST00000587564 SMARCA2P51531 1590 aa41.7■■■■■ 4.27
SPRED3-205ENST00000587564 DNAJC5Q9H3Z4 198 aa41.68■■■■■ 4.26
SPRED3-205ENST00000587564 ERCC6Q03468 1493 aa41.66■■■■■ 4.26
SPRED3-205ENST00000587564 HMGXB3Q12766 1538 aa41.64■■■■■ 4.26
SPRED3-205ENST00000587564 CUX2O14529 1486 aa41.6■■■■■ 4.25
SPRED3-205ENST00000587564 BAZ1AQ9NRL2 1556 aaPredicted RBP41.52■■■■■ 4.24
SPRED3-205ENST00000587564 BAZ1BQ9UIG0 1483 aaKnown RBP41.42■■■■■ 4.22
SPRED3-205ENST00000587564 NESP48681 1621 aa41.33■■■■■ 4.21
SPRED3-205ENST00000587564 PEG3Q9GZU2 1588 aa41.31■■■■■ 4.2
SPRED3-205ENST00000587564 MROH2BQ7Z745 1585 aa41.17■■■■■ 4.18
SPRED3-205ENST00000587564 LAMC3Q9Y6N6 1575 aa41.04■■■■■ 4.16
SPRED3-205ENST00000587564 THOC2Q8NI27 1593 aaKnown RBP40.98■■■■■ 4.15
SPRED3-205ENST00000587564 PDS5BQ9NTI5 1447 aa40.81■■■■■ 4.12
SPRED3-205ENST00000587564 KIF21AQ7Z4S6 1674 aa40.81■■■■■ 4.12
SPRED3-205ENST00000587564 WIZO95785 1651 aa40.67■■■■■ 4.1
SPRED3-205ENST00000587564 CADPSQ9ULU8 1353 aa40.65■■■■■ 4.1
SPRED3-205ENST00000587564 MRC2Q9UBG0 1479 aa40.49■■■■■ 4.07
SPRED3-205ENST00000587564 WDR62O43379 1518 aa40.39■■■■■ 4.06
SPRED3-205ENST00000587564 CEP164Q9UPV0 1460 aa40.31■■■■■ 4.04
SPRED3-205ENST00000587564 RSF1Q96T23 1441 aaPredicted RBP40.25■■■■■ 4.03
SPRED3-205ENST00000587564 FANCD2Q9BXW9 1451 aa40.23■■■■■ 4.03
SPRED3-205ENST00000587564 TOP2AP11388 1531 aaKnown RBP40.18■■■■■ 4.02
SPRED3-205ENST00000587564 CFTRP13569 1480 aa40.16■■■■■ 4.02
SPRED3-205ENST00000587564 URB2Q14146 1524 aaKnown RBP39.89■■■■□ 3.98
SPRED3-205ENST00000587564 TRIM41Q8WV44 630 aa39.87■■■■□ 3.97
SPRED3-205ENST00000587564 PRDM2Q13029 1718 aa39.77■■■■□ 3.96
SPRED3-205ENST00000587564 CCDC88BA6NC98 1476 aa39.68■■■■□ 3.94
SPRED3-205ENST00000587564 OSCARQ8IYS5 282 aa39.63■■■■□ 3.93
SPRED3-205ENST00000587564 IFT140Q96RY7 1462 aa39.49■■■■□ 3.91
SPRED3-205ENST00000587564 TOPBP1Q92547 1522 aa39.45■■■■□ 3.91
SPRED3-205ENST00000587564 ZNF608Q9ULD9 1512 aaPredicted RBP39.42■■■■□ 3.9
SPRED3-205ENST00000587564 ABCC8Q09428 1581 aa39.34■■■■□ 3.89
SPRED3-205ENST00000587564 DNMBPQ6XZF7 1577 aa39.3■■■■□ 3.88
SPRED3-205ENST00000587564 EIF4G3O43432 1585 aaKnown RBP39.24■■■■□ 3.87
SPRED3-205ENST00000587564 RIMBP3CA6NJZ7 1639 aa39.18■■■■□ 3.86
SPRED3-205ENST00000587564 RIMBP3BA6NNM3 1639 aa39.18■■■■□ 3.86
SPRED3-205ENST00000587564 RIMBP3Q9UFD9 1639 aa39.18■■■■□ 3.86
SPRED3-205ENST00000587564 TARBP1Q13395 1621 aaKnown RBP39.08■■■■□ 3.85
SPRED3-205ENST00000587564 ARHGEF11O15085 1522 aa39.04■■■■□ 3.84
SPRED3-205ENST00000587564 AQRO60306 1485 aaKnown RBP eCLIP39.04■■■■□ 3.84
SPRED3-205ENST00000587564 POLA1P09884 1462 aaPredicted RBP39.03■■■■□ 3.84
SPRED3-205ENST00000587564 CHD1O14646 1710 aa38.94■■■■□ 3.82
SPRED3-205ENST00000587564 RAD54L2Q9Y4B4 1467 aa38.88■■■■□ 3.81
SPRED3-205ENST00000587564 SOGA1O94964 1423 aa38.84■■■■□ 3.81
SPRED3-205ENST00000587564 FBLN2P98095 1184 aa38.84■■■■□ 3.81
SPRED3-205ENST00000587564 TDRD9Q8NDG6 1382 aaKnown RBP38.78■■■■□ 3.8
SPRED3-205ENST00000587564 FGD5Q6ZNL6 1462 aa38.78■■■■□ 3.8
SPRED3-205ENST00000587564 CYB5RLQ6IPT4 315 aa38.73■■■■□ 3.79
SPRED3-205ENST00000587564 WDR97A6NE52 1622 aa38.71■■■■□ 3.79
SPRED3-205ENST00000587564 CUX1P39880 1505 aa38.7■■■■□ 3.79
SPRED3-205ENST00000587564 SNAPC4Q5SXM2 1469 aa38.68■■■■□ 3.78
SPRED3-205ENST00000587564 ARAP1Q96P48 1450 aa38.64■■■■□ 3.78
SPRED3-205ENST00000587564 MAGI1Q96QZ7 1491 aaPredicted RBP38.56■■■■□ 3.76
SPRED3-205ENST00000587564 GRIN2BQ13224 1484 aa38.54■■■■□ 3.76
SPRED3-205ENST00000587564 CHMP7Q8WUX9 453 aaPredicted RBP38.52■■■■□ 3.76
SPRED3-205ENST00000587564 CLASP1Q7Z460 1538 aa38.5■■■■□ 3.75
SPRED3-205ENST00000587564 SYNJ1O43426 1573 aa38.49■■■■□ 3.75
SPRED3-205ENST00000587564 SYNJ2O15056 1496 aa38.43■■■■□ 3.74
SPRED3-205ENST00000587564 TRHP20396 242 aaPredicted RBP38.39■■■■□ 3.74
SPRED3-205ENST00000587564 PBRM1Q86U86 1689 aa38.39■■■■□ 3.74
SPRED3-205ENST00000587564 SUPT5HO00267 1087 aaKnown RBP38.38■■■■□ 3.73
SPRED3-205ENST00000587564 GAPVD1Q14C86 1478 aa38.38■■■■□ 3.73
SPRED3-205ENST00000587564 ABCA10Q8WWZ4 1543 aa38.31■■■■□ 3.72
SPRED3-205ENST00000587564 ABCA5Q8WWZ7 1642 aa38.29■■■■□ 3.72
SPRED3-205ENST00000587564 WRNQ14191 1432 aaPredicted RBP eCLIP38.13■■■■□ 3.7
SPRED3-205ENST00000587564 BIVM-ERCC5R4GMW8 1640 aa38.05■■■■□ 3.68
SPRED3-205ENST00000587564 GRIN2AQ12879 1464 aa38.05■■■■□ 3.68
SPRED3-205ENST00000587564 TOP2BQ02880 1626 aa38.04■■■■□ 3.68
SPRED3-205ENST00000587564 ADAMTS12P58397 1594 aa38.03■■■■□ 3.68
SPRED3-205ENST00000587564 NUP160Q12769 1436 aa37.91■■■■□ 3.66
SPRED3-205ENST00000587564 CEP170Q5SW79 1584 aa37.91■■■■□ 3.66
SPRED3-205ENST00000587564 FHAD1B1AJZ9 1412 aa37.88■■■■□ 3.66
SPRED3-205ENST00000587564 ERCC6L2Q5T890 1561 aa37.88■■■■□ 3.65
SPRED3-205ENST00000587564 ERICH3Q5RHP9 1530 aa37.83■■■■□ 3.65
SPRED3-205ENST00000587564 SHROOM2Q13796 1616 aa37.76■■■■□ 3.63
SPRED3-205ENST00000587564 PRG4Q92954 1404 aaPredicted RBP37.56■■■■□ 3.6
SPRED3-205ENST00000587564 RUSC2Q8N2Y8 1516 aa37.5■■■■□ 3.59
SPRED3-205ENST00000587564 JPH4Q96JJ6 628 aa37.48■■■■□ 3.59
SPRED3-205ENST00000587564 AEBP2Q6ZN18 517 aaPredicted RBP37.39■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms