RNA–Protein interactions for RNA: ENST00000587549.1

RTBDN-206, Transcript of retbindin, humanhuman

TSL 3

Gene RTBDN, Length 658 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDN-206ENST00000587549 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
RTBDN-206ENST00000587549 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
RTBDN-206ENST00000587549 ABCC9O60706 1549 aa19.59■□□□□ 0.73
RTBDN-206ENST00000587549 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
RTBDN-206ENST00000587549 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
RTBDN-206ENST00000587549 NACADO15069 1562 aa18.73■□□□□ 0.59
RTBDN-206ENST00000587549 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
RTBDN-206ENST00000587549 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
RTBDN-206ENST00000587549 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
RTBDN-206ENST00000587549 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
RTBDN-206ENST00000587549 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
RTBDN-206ENST00000587549 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
RTBDN-206ENST00000587549 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
RTBDN-206ENST00000587549 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
RTBDN-206ENST00000587549 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
RTBDN-206ENST00000587549 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
RTBDN-206ENST00000587549 EIF4G1Q04637 1599 aaKnown RBP17.67■□□□□ 0.42
RTBDN-206ENST00000587549 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
RTBDN-206ENST00000587549 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
RTBDN-206ENST00000587549 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
RTBDN-206ENST00000587549 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
RTBDN-206ENST00000587549 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
RTBDN-206ENST00000587549 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
RTBDN-206ENST00000587549 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
RTBDN-206ENST00000587549 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
RTBDN-206ENST00000587549 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
RTBDN-206ENST00000587549 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
RTBDN-206ENST00000587549 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
RTBDN-206ENST00000587549 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
RTBDN-206ENST00000587549 WIZO95785 1651 aa17.05■□□□□ 0.32
RTBDN-206ENST00000587549 CUX2O14529 1486 aa17.03■□□□□ 0.32
RTBDN-206ENST00000587549 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
RTBDN-206ENST00000587549 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
RTBDN-206ENST00000587549 NESP48681 1621 aa16.87■□□□□ 0.29
RTBDN-206ENST00000587549 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
RTBDN-206ENST00000587549 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
RTBDN-206ENST00000587549 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
RTBDN-206ENST00000587549 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
RTBDN-206ENST00000587549 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
RTBDN-206ENST00000587549 CFTRP13569 1480 aa16.71■□□□□ 0.27
RTBDN-206ENST00000587549 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
RTBDN-206ENST00000587549 THOC2Q8NI27 1593 aaKnown RBP16.58■□□□□ 0.24
RTBDN-206ENST00000587549 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
RTBDN-206ENST00000587549 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
RTBDN-206ENST00000587549 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
RTBDN-206ENST00000587549 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
RTBDN-206ENST00000587549 WDR62O43379 1518 aa16.44■□□□□ 0.22
RTBDN-206ENST00000587549 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
RTBDN-206ENST00000587549 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
RTBDN-206ENST00000587549 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
RTBDN-206ENST00000587549 TOPBP1Q92547 1522 aa16.33■□□□□ 0.2
RTBDN-206ENST00000587549 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
RTBDN-206ENST00000587549 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
RTBDN-206ENST00000587549 IFT140Q96RY7 1462 aa16.25■□□□□ 0.19
RTBDN-206ENST00000587549 SOGA1O94964 1423 aa16.21■□□□□ 0.19
RTBDN-206ENST00000587549 CUX1P39880 1505 aa16.19■□□□□ 0.18
RTBDN-206ENST00000587549 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
RTBDN-206ENST00000587549 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
RTBDN-206ENST00000587549 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
RTBDN-206ENST00000587549 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
RTBDN-206ENST00000587549 RAD54L2Q9Y4B4 1467 aa16.15■□□□□ 0.18
RTBDN-206ENST00000587549 AQRO60306 1485 aaKnown RBP eCLIP16.12■□□□□ 0.17
RTBDN-206ENST00000587549 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
RTBDN-206ENST00000587549 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
RTBDN-206ENST00000587549 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
RTBDN-206ENST00000587549 FBLN2P98095 1184 aa16.02■□□□□ 0.16
RTBDN-206ENST00000587549 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
RTBDN-206ENST00000587549 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
RTBDN-206ENST00000587549 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
RTBDN-206ENST00000587549 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
RTBDN-206ENST00000587549 CHMP7Q8WUX9 453 aaPredicted RBP15.98■□□□□ 0.15
RTBDN-206ENST00000587549 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
RTBDN-206ENST00000587549 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
RTBDN-206ENST00000587549 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
RTBDN-206ENST00000587549 RIMBP3CA6NJZ7 1639 aa15.95■□□□□ 0.14
RTBDN-206ENST00000587549 RIMBP3BA6NNM3 1639 aa15.95■□□□□ 0.14
RTBDN-206ENST00000587549 RIMBP3Q9UFD9 1639 aa15.95■□□□□ 0.14
RTBDN-206ENST00000587549 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
RTBDN-206ENST00000587549 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
RTBDN-206ENST00000587549 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
RTBDN-206ENST00000587549 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
RTBDN-206ENST00000587549 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
RTBDN-206ENST00000587549 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
RTBDN-206ENST00000587549 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
RTBDN-206ENST00000587549 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
RTBDN-206ENST00000587549 IGF1RP08069 1367 aa15.81■□□□□ 0.12
RTBDN-206ENST00000587549 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
RTBDN-206ENST00000587549 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
RTBDN-206ENST00000587549 FHAD1B1AJZ9 1412 aa15.8■□□□□ 0.12
RTBDN-206ENST00000587549 CHD1O14646 1710 aa15.8■□□□□ 0.12
RTBDN-206ENST00000587549 GRIN2AQ12879 1464 aa15.73■□□□□ 0.11
RTBDN-206ENST00000587549 ARAP1Q96P48 1450 aa15.71■□□□□ 0.11
RTBDN-206ENST00000587549 CARMIL1Q5VZK9 1371 aa15.71■□□□□ 0.11
RTBDN-206ENST00000587549 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
RTBDN-206ENST00000587549 CHIC1Q5VXU3 224 aa15.7■□□□□ 0.1
RTBDN-206ENST00000587549 NUP160Q12769 1436 aa15.67■□□□□ 0.1
RTBDN-206ENST00000587549 CLASP1Q7Z460 1538 aa15.66■□□□□ 0.1
RTBDN-206ENST00000587549 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
RTBDN-206ENST00000587549 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
RTBDN-206ENST00000587549 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms