RNA–Protein interactions for RNA: ENST00000587518.5

GRN-209, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-209ENST00000587518 NISCHQ9Y2I1 1504 aa35.07■■■■□ 3.21
GRN-209ENST00000587518 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
GRN-209ENST00000587518 ABCC9O60706 1549 aa29.58■■■□□ 2.33
GRN-209ENST00000587518 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
GRN-209ENST00000587518 DCAF8L2P0C7V8 631 aa29.08■■■□□ 2.25
GRN-209ENST00000587518 DCAF1Q9Y4B6 1507 aa29.02■■■□□ 2.24
GRN-209ENST00000587518 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
GRN-209ENST00000587518 NACADO15069 1562 aa28.79■■■□□ 2.2
GRN-209ENST00000587518 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
GRN-209ENST00000587518 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
GRN-209ENST00000587518 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
GRN-209ENST00000587518 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
GRN-209ENST00000587518 BICRAQ9NZM4 1560 aa27.69■■■□□ 2.02
GRN-209ENST00000587518 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
GRN-209ENST00000587518 PABPN1Q86U42 306 aaKnown RBP eCLIP27.62■■■□□ 2.01
GRN-209ENST00000587518 CECR2Q9BXF3 1484 aa27.23■■□□□ 1.95
GRN-209ENST00000587518 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
GRN-209ENST00000587518 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
GRN-209ENST00000587518 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
GRN-209ENST00000587518 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
GRN-209ENST00000587518 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
GRN-209ENST00000587518 EIF4G1Q04637 1599 aaKnown RBP26.95■■□□□ 1.9
GRN-209ENST00000587518 WIZO95785 1651 aa26.85■■□□□ 1.89
GRN-209ENST00000587518 CC2D2AQ9P2K1 1620 aa26.74■■□□□ 1.87
GRN-209ENST00000587518 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
GRN-209ENST00000587518 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
GRN-209ENST00000587518 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
GRN-209ENST00000587518 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
GRN-209ENST00000587518 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.85
GRN-209ENST00000587518 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
GRN-209ENST00000587518 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
GRN-209ENST00000587518 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
GRN-209ENST00000587518 CFTRP13569 1480 aa25.82■■□□□ 1.72
GRN-209ENST00000587518 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
GRN-209ENST00000587518 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
GRN-209ENST00000587518 LAMC3Q9Y6N6 1575 aa25.74■■□□□ 1.71
GRN-209ENST00000587518 NESP48681 1621 aa25.69■■□□□ 1.7
GRN-209ENST00000587518 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
GRN-209ENST00000587518 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
GRN-209ENST00000587518 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
GRN-209ENST00000587518 FANCD2Q9BXW9 1451 aa25.57■■□□□ 1.68
GRN-209ENST00000587518 ERCC6Q03468 1493 aa25.55■■□□□ 1.68
GRN-209ENST00000587518 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
GRN-209ENST00000587518 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
GRN-209ENST00000587518 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
GRN-209ENST00000587518 CUX2O14529 1486 aa25.51■■□□□ 1.67
GRN-209ENST00000587518 CEP164Q9UPV0 1460 aa25.48■■□□□ 1.67
GRN-209ENST00000587518 KIF21AQ7Z4S6 1674 aa25.45■■□□□ 1.66
GRN-209ENST00000587518 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
GRN-209ENST00000587518 TOP2BQ02880 1626 aa25.36■■□□□ 1.65
GRN-209ENST00000587518 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
GRN-209ENST00000587518 CUX1P39880 1505 aa25.35■■□□□ 1.65
GRN-209ENST00000587518 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
GRN-209ENST00000587518 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
GRN-209ENST00000587518 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
GRN-209ENST00000587518 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
GRN-209ENST00000587518 THOC2Q8NI27 1593 aaKnown RBP25.17■■□□□ 1.62
GRN-209ENST00000587518 FGD5Q6ZNL6 1462 aa25.16■■□□□ 1.62
GRN-209ENST00000587518 WDR62O43379 1518 aa25.12■■□□□ 1.61
GRN-209ENST00000587518 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.6
GRN-209ENST00000587518 FAM9AQ8IZU1 332 aaPredicted RBP25.01■■□□□ 1.59
GRN-209ENST00000587518 SOGA1O94964 1423 aa25.01■■□□□ 1.59
GRN-209ENST00000587518 EEA1Q15075 1411 aa24.99■■□□□ 1.59
GRN-209ENST00000587518 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
GRN-209ENST00000587518 KIF27Q86VH2 1401 aa24.93■■□□□ 1.58
GRN-209ENST00000587518 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
GRN-209ENST00000587518 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
GRN-209ENST00000587518 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
GRN-209ENST00000587518 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
GRN-209ENST00000587518 TARBP1Q13395 1621 aaKnown RBP24.87■■□□□ 1.57
GRN-209ENST00000587518 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
GRN-209ENST00000587518 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
GRN-209ENST00000587518 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
GRN-209ENST00000587518 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
GRN-209ENST00000587518 KIF21BO75037 1637 aa24.68■■□□□ 1.54
GRN-209ENST00000587518 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
GRN-209ENST00000587518 ZNF608Q9ULD9 1512 aaPredicted RBP24.68■■□□□ 1.54
GRN-209ENST00000587518 EHMT2Q96KQ7 1210 aa24.68■■□□□ 1.54
GRN-209ENST00000587518 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
GRN-209ENST00000587518 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
GRN-209ENST00000587518 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.549e-10■■■■■ 33.9
GRN-209ENST00000587518 LOC105371045A0A1W2PR82 267 aa24.64■■□□□ 1.54
GRN-209ENST00000587518 CUL7Q14999 1698 aa24.64■■□□□ 1.53
GRN-209ENST00000587518 IGF1RP08069 1367 aa24.64■■□□□ 1.53
GRN-209ENST00000587518 GOLGA3Q08378 1498 aa24.64■■□□□ 1.53
GRN-209ENST00000587518 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
GRN-209ENST00000587518 PRXQ9BXM0 1461 aa24.59■■□□□ 1.53
GRN-209ENST00000587518 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
GRN-209ENST00000587518 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
GRN-209ENST00000587518 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
GRN-209ENST00000587518 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
GRN-209ENST00000587518 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
GRN-209ENST00000587518 FHAD1B1AJZ9 1412 aa24.46■■□□□ 1.51
GRN-209ENST00000587518 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
GRN-209ENST00000587518 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
GRN-209ENST00000587518 OSCARQ8IYS5 282 aa24.36■■□□□ 1.49
GRN-209ENST00000587518 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
GRN-209ENST00000587518 CTTNBP2Q8WZ74 1663 aa24.31■■□□□ 1.48
GRN-209ENST00000587518 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
GRN-209ENST00000587518 GRIN2AQ12879 1464 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms