RNA–Protein interactions for RNA: ENST00000587499.1

JRK-205, Transcript of Jrk helix-turn-helix protein, humanhuman

TSL 3

Gene JRK, Length 1,092 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-205ENST00000587499 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
JRK-205ENST00000587499 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
JRK-205ENST00000587499 ABCC9O60706 1549 aa38.26■■■■□ 3.72
JRK-205ENST00000587499 RB1CC1Q8TDY2 1594 aa36.54■■■■□ 3.44
JRK-205ENST00000587499 NACADO15069 1562 aa36.36■■■■□ 3.41
JRK-205ENST00000587499 DCAF8L2P0C7V8 631 aa36.1■■■■□ 3.37
JRK-205ENST00000587499 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
JRK-205ENST00000587499 UNC13AQ9UPW8 1703 aa35.82■■■■□ 3.32
JRK-205ENST00000587499 ZCCHC6Q5VYS8 1495 aaKnown RBP35.72■■■■□ 3.31
JRK-205ENST00000587499 DNAJC5BQ9UF47 199 aa35.68■■■■□ 3.3
JRK-205ENST00000587499 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
JRK-205ENST00000587499 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.28
JRK-205ENST00000587499 BICRAQ9NZM4 1560 aa35.51■■■■□ 3.28
JRK-205ENST00000587499 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
JRK-205ENST00000587499 SHROOM4Q9ULL8 1493 aa35.02■■■■□ 3.2
JRK-205ENST00000587499 CC2D2AQ9P2K1 1620 aa34.62■■■■□ 3.13
JRK-205ENST00000587499 EIF4G1Q04637 1599 aaKnown RBP34.59■■■■□ 3.13
JRK-205ENST00000587499 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
JRK-205ENST00000587499 SMARCA4P51532 1647 aa33.54■■■□□ 2.96
JRK-205ENST00000587499 NCAPD3P42695 1498 aa33.54■■■□□ 2.96
JRK-205ENST00000587499 ATAD2BQ9ULI0 1458 aa33.48■■■□□ 2.95
JRK-205ENST00000587499 SMARCA2P51531 1590 aa33.39■■■□□ 2.94
JRK-205ENST00000587499 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
JRK-205ENST00000587499 HMGXB3Q12766 1538 aa33.34■■■□□ 2.93
JRK-205ENST00000587499 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
JRK-205ENST00000587499 MROH2BQ7Z745 1585 aa33.17■■■□□ 2.9
JRK-205ENST00000587499 BAZ1BQ9UIG0 1483 aaKnown RBP33.16■■■□□ 2.9
JRK-205ENST00000587499 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
JRK-205ENST00000587499 NESP48681 1621 aa32.95■■■□□ 2.87
JRK-205ENST00000587499 CUX2O14529 1486 aa32.88■■■□□ 2.85
JRK-205ENST00000587499 WIZO95785 1651 aa32.8■■■□□ 2.84
JRK-205ENST00000587499 LAMC3Q9Y6N6 1575 aa32.77■■■□□ 2.84
JRK-205ENST00000587499 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
JRK-205ENST00000587499 KIF21AQ7Z4S6 1674 aa32.59■■■□□ 2.81
JRK-205ENST00000587499 DNAJC5Q9H3Z4 198 aa32.56■■■□□ 2.8
JRK-205ENST00000587499 RSF1Q96T23 1441 aaPredicted RBP32.54■■■□□ 2.8
JRK-205ENST00000587499 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.8
JRK-205ENST00000587499 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
JRK-205ENST00000587499 TOP2AP11388 1531 aaKnown RBP32.38■■■□□ 2.77
JRK-205ENST00000587499 MRC2Q9UBG0 1479 aa32.26■■■□□ 2.75
JRK-205ENST00000587499 CFTRP13569 1480 aa32.22■■■□□ 2.75
JRK-205ENST00000587499 WDR62O43379 1518 aa32.21■■■□□ 2.75
JRK-205ENST00000587499 CEP164Q9UPV0 1460 aa32.17■■■□□ 2.74
JRK-205ENST00000587499 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
JRK-205ENST00000587499 PRDM2Q13029 1718 aa32■■■□□ 2.71
JRK-205ENST00000587499 CCDC88BA6NC98 1476 aa31.99■■■□□ 2.71
JRK-205ENST00000587499 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
JRK-205ENST00000587499 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
JRK-205ENST00000587499 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
JRK-205ENST00000587499 ABCC8Q09428 1581 aa31.51■■■□□ 2.64
JRK-205ENST00000587499 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
JRK-205ENST00000587499 ZNF608Q9ULD9 1512 aaPredicted RBP31.47■■■□□ 2.63
JRK-205ENST00000587499 OSCARQ8IYS5 282 aa31.37■■■□□ 2.61
JRK-205ENST00000587499 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
JRK-205ENST00000587499 EIF4G3O43432 1585 aaKnown RBP31.33■■■□□ 2.61
JRK-205ENST00000587499 POLA1P09884 1462 aaPredicted RBP31.28■■■□□ 2.6
JRK-205ENST00000587499 TRIM41Q8WV44 630 aa31.21■■■□□ 2.59
JRK-205ENST00000587499 SUPT5HO00267 1087 aaKnown RBP31.2■■■□□ 2.59
JRK-205ENST00000587499 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.58
JRK-205ENST00000587499 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
JRK-205ENST00000587499 CUX1P39880 1505 aa31.15■■■□□ 2.58
JRK-205ENST00000587499 FGD5Q6ZNL6 1462 aa31.12■■■□□ 2.57
JRK-205ENST00000587499 SOGA1O94964 1423 aa31.11■■■□□ 2.57
JRK-205ENST00000587499 CHD1O14646 1710 aa31.08■■■□□ 2.57
JRK-205ENST00000587499 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
JRK-205ENST00000587499 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
JRK-205ENST00000587499 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
JRK-205ENST00000587499 TDRD9Q8NDG6 1382 aaKnown RBP31.02■■■□□ 2.56
JRK-205ENST00000587499 WDR97A6NE52 1622 aa31.01■■■□□ 2.55
JRK-205ENST00000587499 ARHGEF11O15085 1522 aa30.93■■■□□ 2.54
JRK-205ENST00000587499 SNAPC4Q5SXM2 1469 aa30.89■■■□□ 2.54
JRK-205ENST00000587499 FBLN2P98095 1184 aa30.87■■■□□ 2.53
JRK-205ENST00000587499 GRIN2BQ13224 1484 aa30.82■■■□□ 2.53
JRK-205ENST00000587499 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.52
JRK-205ENST00000587499 PBRM1Q86U86 1689 aa30.8■■■□□ 2.52
JRK-205ENST00000587499 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
JRK-205ENST00000587499 ABCA5Q8WWZ7 1642 aa30.76■■■□□ 2.51
JRK-205ENST00000587499 GAPVD1Q14C86 1478 aa30.76■■■□□ 2.51
JRK-205ENST00000587499 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
JRK-205ENST00000587499 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
JRK-205ENST00000587499 CLASP1Q7Z460 1538 aa30.71■■■□□ 2.51
JRK-205ENST00000587499 SYNJ2O15056 1496 aa30.7■■■□□ 2.51
JRK-205ENST00000587499 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
JRK-205ENST00000587499 CHMP7Q8WUX9 453 aaPredicted RBP30.69■■■□□ 2.5
JRK-205ENST00000587499 WRNQ14191 1432 aaPredicted RBP eCLIP30.67■■■□□ 2.5
JRK-205ENST00000587499 ARAP1Q96P48 1450 aa30.64■■■□□ 2.5
JRK-205ENST00000587499 CYB5RLQ6IPT4 315 aa30.62■■■□□ 2.49
JRK-205ENST00000587499 ADAMTS12P58397 1594 aa30.49■■■□□ 2.47
JRK-205ENST00000587499 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
JRK-205ENST00000587499 ERICH3Q5RHP9 1530 aa30.4■■■□□ 2.46
JRK-205ENST00000587499 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
JRK-205ENST00000587499 CEP170Q5SW79 1584 aa30.36■■■□□ 2.45
JRK-205ENST00000587499 NUP160Q12769 1436 aa30.35■■■□□ 2.45
JRK-205ENST00000587499 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
JRK-205ENST00000587499 SHROOM2Q13796 1616 aa30.22■■■□□ 2.43
JRK-205ENST00000587499 TRHP20396 242 aaPredicted RBP30.17■■■□□ 2.42
JRK-205ENST00000587499 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
JRK-205ENST00000587499 KIF27Q86VH2 1401 aa30.06■■■□□ 2.4
JRK-205ENST00000587499 IGF1RP08069 1367 aa30.03■■■□□ 2.4
JRK-205ENST00000587499 CUL7Q14999 1698 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms