RNA–Protein interactions for RNA: ENST00000587437.5

HKR1-207, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 4

Gene HKR1, Length 556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-207ENST00000587437 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
HKR1-207ENST00000587437 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
HKR1-207ENST00000587437 ABCC9O60706 1549 aa18.03■□□□□ 0.48
HKR1-207ENST00000587437 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
HKR1-207ENST00000587437 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
HKR1-207ENST00000587437 NACADO15069 1562 aa17.23■□□□□ 0.35
HKR1-207ENST00000587437 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
HKR1-207ENST00000587437 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
HKR1-207ENST00000587437 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
HKR1-207ENST00000587437 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
HKR1-207ENST00000587437 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
HKR1-207ENST00000587437 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
HKR1-207ENST00000587437 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
HKR1-207ENST00000587437 BICRAQ9NZM4 1560 aa16.76■□□□□ 0.27
HKR1-207ENST00000587437 SHROOM4Q9ULL8 1493 aa16.52■□□□□ 0.23
HKR1-207ENST00000587437 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
HKR1-207ENST00000587437 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
HKR1-207ENST00000587437 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
HKR1-207ENST00000587437 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
HKR1-207ENST00000587437 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
HKR1-207ENST00000587437 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
HKR1-207ENST00000587437 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
HKR1-207ENST00000587437 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
HKR1-207ENST00000587437 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
HKR1-207ENST00000587437 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
HKR1-207ENST00000587437 BAZ1BQ9UIG0 1483 aaKnown RBP15.83■□□□□ 0.12
HKR1-207ENST00000587437 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
HKR1-207ENST00000587437 WIZO95785 1651 aa15.79■□□□□ 0.12
HKR1-207ENST00000587437 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
HKR1-207ENST00000587437 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
HKR1-207ENST00000587437 NESP48681 1621 aa15.58■□□□□ 0.09
HKR1-207ENST00000587437 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
HKR1-207ENST00000587437 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
HKR1-207ENST00000587437 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
HKR1-207ENST00000587437 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
HKR1-207ENST00000587437 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
HKR1-207ENST00000587437 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
HKR1-207ENST00000587437 SUPT5HO00267 1087 aaKnown RBP15.39■□□□□ 0.05
HKR1-207ENST00000587437 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
HKR1-207ENST00000587437 CUX2O14529 1486 aa15.34■□□□□ 0.05
HKR1-207ENST00000587437 THOC2Q8NI27 1593 aaKnown RBP15.34■□□□□ 0.05
HKR1-207ENST00000587437 CFTRP13569 1480 aa15.33■□□□□ 0.05
HKR1-207ENST00000587437 PRDM2Q13029 1718 aa15.3■□□□□ 0.04
HKR1-207ENST00000587437 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
HKR1-207ENST00000587437 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
HKR1-207ENST00000587437 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
HKR1-207ENST00000587437 WDR62O43379 1518 aa15.2■□□□□ 0.02
HKR1-207ENST00000587437 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
HKR1-207ENST00000587437 TOPBP1Q92547 1522 aa15.05■□□□□ -0
HKR1-207ENST00000587437 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
HKR1-207ENST00000587437 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
HKR1-207ENST00000587437 CUX1P39880 1505 aa14.94□□□□□ -0.02
HKR1-207ENST00000587437 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
HKR1-207ENST00000587437 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
HKR1-207ENST00000587437 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
HKR1-207ENST00000587437 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
HKR1-207ENST00000587437 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
HKR1-207ENST00000587437 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
HKR1-207ENST00000587437 EIF4G3O43432 1585 aaKnown RBP14.87□□□□□ -0.03
HKR1-207ENST00000587437 SOGA1O94964 1423 aa14.86□□□□□ -0.03
HKR1-207ENST00000587437 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
HKR1-207ENST00000587437 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
HKR1-207ENST00000587437 SYNJ1O43426 1573 aa14.82□□□□□ -0.04
HKR1-207ENST00000587437 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
HKR1-207ENST00000587437 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
HKR1-207ENST00000587437 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
HKR1-207ENST00000587437 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
HKR1-207ENST00000587437 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
HKR1-207ENST00000587437 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
HKR1-207ENST00000587437 PBRM1Q86U86 1689 aa14.71□□□□□ -0.05
HKR1-207ENST00000587437 CHD1O14646 1710 aa14.71□□□□□ -0.05
HKR1-207ENST00000587437 FBLN2P98095 1184 aa14.7□□□□□ -0.06
HKR1-207ENST00000587437 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
HKR1-207ENST00000587437 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
HKR1-207ENST00000587437 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
HKR1-207ENST00000587437 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
HKR1-207ENST00000587437 GRIN2BQ13224 1484 aa14.68□□□□□ -0.06
HKR1-207ENST00000587437 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
HKR1-207ENST00000587437 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
HKR1-207ENST00000587437 SYNJ2O15056 1496 aa14.58□□□□□ -0.08
HKR1-207ENST00000587437 ADAMTS12P58397 1594 aa14.56□□□□□ -0.08
HKR1-207ENST00000587437 ERICH3Q5RHP9 1530 aa14.55□□□□□ -0.08
HKR1-207ENST00000587437 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
HKR1-207ENST00000587437 RIMBP3CA6NJZ7 1639 aa14.51□□□□□ -0.09
HKR1-207ENST00000587437 RIMBP3BA6NNM3 1639 aa14.51□□□□□ -0.09
HKR1-207ENST00000587437 RIMBP3Q9UFD9 1639 aa14.51□□□□□ -0.09
HKR1-207ENST00000587437 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
HKR1-207ENST00000587437 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
HKR1-207ENST00000587437 ARHGEF11O15085 1522 aa14.48□□□□□ -0.09
HKR1-207ENST00000587437 CLASP1Q7Z460 1538 aa14.48□□□□□ -0.09
HKR1-207ENST00000587437 CUL7Q14999 1698 aa14.45□□□□□ -0.1
HKR1-207ENST00000587437 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
HKR1-207ENST00000587437 IGF1RP08069 1367 aa14.43□□□□□ -0.1
HKR1-207ENST00000587437 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
HKR1-207ENST00000587437 NUP160Q12769 1436 aa14.4□□□□□ -0.1
HKR1-207ENST00000587437 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
HKR1-207ENST00000587437 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
HKR1-207ENST00000587437 ARAP1Q96P48 1450 aa14.36□□□□□ -0.11
HKR1-207ENST00000587437 ERCC6L2Q5T890 1561 aa14.32□□□□□ -0.12
HKR1-207ENST00000587437 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms