RNA–Protein interactions for RNA: ENST00000587336.1

SMAD7-205, Transcript of SMAD family member 7, humanhuman

TSL 4

Gene SMAD7, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-205ENST00000587336 NISCHQ9Y2I1 1504 aa27.28■■□□□ 1.96
SMAD7-205ENST00000587336 ABCC9O60706 1549 aa24.99■■□□□ 1.59
SMAD7-205ENST00000587336 CCDC180Q9P1Z9 1646 aa24.48■■□□□ 1.51
SMAD7-205ENST00000587336 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
SMAD7-205ENST00000587336 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
SMAD7-205ENST00000587336 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
SMAD7-205ENST00000587336 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMAD7-205ENST00000587336 NACADO15069 1562 aa23.14■■□□□ 1.29
SMAD7-205ENST00000587336 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
SMAD7-205ENST00000587336 UNC13AQ9UPW8 1703 aa22.89■■□□□ 1.26
SMAD7-205ENST00000587336 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
SMAD7-205ENST00000587336 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
SMAD7-205ENST00000587336 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
SMAD7-205ENST00000587336 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
SMAD7-205ENST00000587336 CC2D2AQ9P2K1 1620 aa22.5■■□□□ 1.19
SMAD7-205ENST00000587336 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
SMAD7-205ENST00000587336 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
SMAD7-205ENST00000587336 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
SMAD7-205ENST00000587336 EIF4G1Q04637 1599 aaKnown RBP22.24■■□□□ 1.15
SMAD7-205ENST00000587336 CUX2O14529 1486 aa21.9■■□□□ 1.1
SMAD7-205ENST00000587336 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
SMAD7-205ENST00000587336 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
SMAD7-205ENST00000587336 NCAPD3P42695 1498 aa21.33■■□□□ 1.01
SMAD7-205ENST00000587336 SMARCA4P51532 1647 aa21.32■■□□□ 1
SMAD7-205ENST00000587336 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
SMAD7-205ENST00000587336 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
SMAD7-205ENST00000587336 NESP48681 1621 aa21.21■□□□□ 0.99
SMAD7-205ENST00000587336 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
SMAD7-205ENST00000587336 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
SMAD7-205ENST00000587336 THOC2Q8NI27 1593 aaKnown RBP21.15■□□□□ 0.98
SMAD7-205ENST00000587336 BAZ1BQ9UIG0 1483 aaKnown RBP21.14■□□□□ 0.98
SMAD7-205ENST00000587336 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
SMAD7-205ENST00000587336 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
SMAD7-205ENST00000587336 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.94
SMAD7-205ENST00000587336 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
SMAD7-205ENST00000587336 WIZO95785 1651 aa20.86■□□□□ 0.93
SMAD7-205ENST00000587336 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
SMAD7-205ENST00000587336 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
SMAD7-205ENST00000587336 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
SMAD7-205ENST00000587336 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
SMAD7-205ENST00000587336 WDR62O43379 1518 aa20.67■□□□□ 0.9
SMAD7-205ENST00000587336 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
SMAD7-205ENST00000587336 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
SMAD7-205ENST00000587336 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
SMAD7-205ENST00000587336 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
SMAD7-205ENST00000587336 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
SMAD7-205ENST00000587336 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
SMAD7-205ENST00000587336 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
SMAD7-205ENST00000587336 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
SMAD7-205ENST00000587336 CFTRP13569 1480 aa20.47■□□□□ 0.87
SMAD7-205ENST00000587336 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
SMAD7-205ENST00000587336 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
SMAD7-205ENST00000587336 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
SMAD7-205ENST00000587336 CYB5RLQ6IPT4 315 aa20.35■□□□□ 0.85
SMAD7-205ENST00000587336 PRDM2Q13029 1718 aa20.34■□□□□ 0.85
SMAD7-205ENST00000587336 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
SMAD7-205ENST00000587336 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
SMAD7-205ENST00000587336 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
SMAD7-205ENST00000587336 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
SMAD7-205ENST00000587336 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
SMAD7-205ENST00000587336 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
SMAD7-205ENST00000587336 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
SMAD7-205ENST00000587336 ABCC8Q09428 1581 aa20.02■□□□□ 0.8
SMAD7-205ENST00000587336 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.78
SMAD7-205ENST00000587336 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
SMAD7-205ENST00000587336 CHD1O14646 1710 aa19.94■□□□□ 0.78
SMAD7-205ENST00000587336 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
SMAD7-205ENST00000587336 FBLN2P98095 1184 aa19.9■□□□□ 0.78
SMAD7-205ENST00000587336 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
SMAD7-205ENST00000587336 SOGA1O94964 1423 aa19.84■□□□□ 0.77
SMAD7-205ENST00000587336 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.76
SMAD7-205ENST00000587336 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
SMAD7-205ENST00000587336 SUPT5HO00267 1087 aaKnown RBP19.8■□□□□ 0.76
SMAD7-205ENST00000587336 CUX1P39880 1505 aa19.79■□□□□ 0.76
SMAD7-205ENST00000587336 ILDR1Q86SU0 546 aaPredicted RBP19.75■□□□□ 0.75
SMAD7-205ENST00000587336 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
SMAD7-205ENST00000587336 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
SMAD7-205ENST00000587336 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
SMAD7-205ENST00000587336 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
SMAD7-205ENST00000587336 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
SMAD7-205ENST00000587336 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
SMAD7-205ENST00000587336 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
SMAD7-205ENST00000587336 SYNJ1O43426 1573 aa19.62■□□□□ 0.73
SMAD7-205ENST00000587336 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
SMAD7-205ENST00000587336 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
SMAD7-205ENST00000587336 ABCA10Q8WWZ4 1543 aa19.54■□□□□ 0.72
SMAD7-205ENST00000587336 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
SMAD7-205ENST00000587336 WRNQ14191 1432 aaPredicted RBP eCLIP19.47■□□□□ 0.71
SMAD7-205ENST00000587336 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
SMAD7-205ENST00000587336 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
SMAD7-205ENST00000587336 KDM4FA0A1W2PPD8 638 aa19.41■□□□□ 0.7
SMAD7-205ENST00000587336 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
SMAD7-205ENST00000587336 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
SMAD7-205ENST00000587336 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
SMAD7-205ENST00000587336 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
SMAD7-205ENST00000587336 KIF13AQ9H1H9 1805 aa19.35■□□□□ 0.69
SMAD7-205ENST00000587336 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
SMAD7-205ENST00000587336 NUP160Q12769 1436 aa19.3■□□□□ 0.68
SMAD7-205ENST00000587336 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
SMAD7-205ENST00000587336 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms