RNA–Protein interactions for RNA: ENST00000587308.5

CYTH1-208, Transcript of cytohesin 1, humanhuman

TSL 5

Gene CYTH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-208ENST00000587308 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
CYTH1-208ENST00000587308 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.46
CYTH1-208ENST00000587308 ABCC9O60706 1549 aa23.73■■□□□ 1.39
CYTH1-208ENST00000587308 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
CYTH1-208ENST00000587308 NACADO15069 1562 aa22.72■■□□□ 1.23
CYTH1-208ENST00000587308 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
CYTH1-208ENST00000587308 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
CYTH1-208ENST00000587308 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
CYTH1-208ENST00000587308 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
CYTH1-208ENST00000587308 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
CYTH1-208ENST00000587308 BICRAQ9NZM4 1560 aa22.1■■□□□ 1.13
CYTH1-208ENST00000587308 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
CYTH1-208ENST00000587308 SHROOM4Q9ULL8 1493 aa21.94■■□□□ 1.1
CYTH1-208ENST00000587308 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
CYTH1-208ENST00000587308 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
CYTH1-208ENST00000587308 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
CYTH1-208ENST00000587308 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
CYTH1-208ENST00000587308 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
CYTH1-208ENST00000587308 SMARCA4P51532 1647 aa21■□□□□ 0.95
CYTH1-208ENST00000587308 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
CYTH1-208ENST00000587308 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
CYTH1-208ENST00000587308 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
CYTH1-208ENST00000587308 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
CYTH1-208ENST00000587308 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
CYTH1-208ENST00000587308 PEG3Q9GZU2 1588 aa20.84■□□□□ 0.93
CYTH1-208ENST00000587308 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
CYTH1-208ENST00000587308 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
CYTH1-208ENST00000587308 WIZO95785 1651 aa20.52■□□□□ 0.88
CYTH1-208ENST00000587308 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
CYTH1-208ENST00000587308 NESP48681 1621 aa20.47■□□□□ 0.87
CYTH1-208ENST00000587308 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
CYTH1-208ENST00000587308 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
CYTH1-208ENST00000587308 CUX2O14529 1486 aa20.4■□□□□ 0.86
CYTH1-208ENST00000587308 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
CYTH1-208ENST00000587308 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
CYTH1-208ENST00000587308 PDS5BQ9NTI5 1447 aa20.3■□□□□ 0.84
CYTH1-208ENST00000587308 THOC2Q8NI27 1593 aaKnown RBP20.26■□□□□ 0.83
CYTH1-208ENST00000587308 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
CYTH1-208ENST00000587308 CFTRP13569 1480 aa20.18■□□□□ 0.82
CYTH1-208ENST00000587308 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
CYTH1-208ENST00000587308 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
CYTH1-208ENST00000587308 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.81
CYTH1-208ENST00000587308 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
CYTH1-208ENST00000587308 WDR62O43379 1518 aa20.07■□□□□ 0.8
CYTH1-208ENST00000587308 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
CYTH1-208ENST00000587308 DNAJC5Q9H3Z4 198 aa19.96■□□□□ 0.79
CYTH1-208ENST00000587308 URB2Q14146 1524 aaKnown RBP19.9■□□□□ 0.78
CYTH1-208ENST00000587308 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
CYTH1-208ENST00000587308 TOPBP1Q92547 1522 aa19.75■□□□□ 0.75
CYTH1-208ENST00000587308 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
CYTH1-208ENST00000587308 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
CYTH1-208ENST00000587308 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
CYTH1-208ENST00000587308 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.73
CYTH1-208ENST00000587308 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
CYTH1-208ENST00000587308 TARBP1Q13395 1621 aaKnown RBP19.56■□□□□ 0.72
CYTH1-208ENST00000587308 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
CYTH1-208ENST00000587308 CUX1P39880 1505 aa19.51■□□□□ 0.71
CYTH1-208ENST00000587308 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
CYTH1-208ENST00000587308 SOGA1O94964 1423 aa19.46■□□□□ 0.71
CYTH1-208ENST00000587308 WDR97A6NE52 1622 aa19.45■□□□□ 0.7
CYTH1-208ENST00000587308 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
CYTH1-208ENST00000587308 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
CYTH1-208ENST00000587308 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.77e-6■■□□□ 12.2
CYTH1-208ENST00000587308 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
CYTH1-208ENST00000587308 BIVM-ERCC5R4GMW8 1640 aa19.32■□□□□ 0.68
CYTH1-208ENST00000587308 TOP2BQ02880 1626 aa19.31■□□□□ 0.68
CYTH1-208ENST00000587308 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
CYTH1-208ENST00000587308 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
CYTH1-208ENST00000587308 CHD1O14646 1710 aa19.3■□□□□ 0.68
CYTH1-208ENST00000587308 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
CYTH1-208ENST00000587308 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
CYTH1-208ENST00000587308 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
CYTH1-208ENST00000587308 SYNJ1O43426 1573 aa19.27■□□□□ 0.67
CYTH1-208ENST00000587308 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
CYTH1-208ENST00000587308 GAPVD1Q14C86 1478 aa19.24■□□□□ 0.67
CYTH1-208ENST00000587308 PBRM1Q86U86 1689 aa19.23■□□□□ 0.67
CYTH1-208ENST00000587308 RIMBP3CA6NJZ7 1639 aa19.19■□□□□ 0.66
CYTH1-208ENST00000587308 RIMBP3BA6NNM3 1639 aa19.19■□□□□ 0.66
CYTH1-208ENST00000587308 RIMBP3Q9UFD9 1639 aa19.19■□□□□ 0.66
CYTH1-208ENST00000587308 FBLN2P98095 1184 aa19.19■□□□□ 0.66
CYTH1-208ENST00000587308 SYNJ2O15056 1496 aa19.19■□□□□ 0.66
CYTH1-208ENST00000587308 ARHGEF11O15085 1522 aa19.17■□□□□ 0.66
CYTH1-208ENST00000587308 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
CYTH1-208ENST00000587308 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
CYTH1-208ENST00000587308 CLASP1Q7Z460 1538 aa19.12■□□□□ 0.65
CYTH1-208ENST00000587308 ADAMTS12P58397 1594 aa19.08■□□□□ 0.65
CYTH1-208ENST00000587308 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
CYTH1-208ENST00000587308 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
CYTH1-208ENST00000587308 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
CYTH1-208ENST00000587308 ARAP1Q96P48 1450 aa19■□□□□ 0.63
CYTH1-208ENST00000587308 NUP160Q12769 1436 aa18.98■□□□□ 0.63
CYTH1-208ENST00000587308 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
CYTH1-208ENST00000587308 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
CYTH1-208ENST00000587308 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
CYTH1-208ENST00000587308 CUL7Q14999 1698 aa18.86■□□□□ 0.61
CYTH1-208ENST00000587308 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
CYTH1-208ENST00000587308 IGF1RP08069 1367 aa18.85■□□□□ 0.61
CYTH1-208ENST00000587308 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
CYTH1-208ENST00000587308 ERCC6L2Q5T890 1561 aa18.79■□□□□ 0.6
CYTH1-208ENST00000587308 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms