RNA–Protein interactions for RNA: ENST00000587268.1

PSMC3IP-205, Transcript of PSMC3 interacting protein, humanhuman

TSL 4

Gene PSMC3IP, Length 838 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3IP-205ENST00000587268 NISCHQ9Y2I1 1504 aa52.55■■■■■ 6
PSMC3IP-205ENST00000587268 CCDC180Q9P1Z9 1646 aa47.19■■■■■ 5.14
PSMC3IP-205ENST00000587268 ABCC9O60706 1549 aa47.18■■■■■ 5.14
PSMC3IP-205ENST00000587268 RB1CC1Q8TDY2 1594 aa44.97■■■■■ 4.79
PSMC3IP-205ENST00000587268 NACADO15069 1562 aa44.69■■■■■ 4.74
PSMC3IP-205ENST00000587268 DNAJC5BQ9UF47 199 aa44.35■■■■■ 4.69
PSMC3IP-205ENST00000587268 DCAF8L2P0C7V8 631 aa44.27■■■■■ 4.68
PSMC3IP-205ENST00000587268 MYO15BQ96JP2 1530 aa44.15■■■■■ 4.66
PSMC3IP-205ENST00000587268 PABPN1Q86U42 306 aaKnown RBP eCLIP43.91■■■■■ 4.62
PSMC3IP-205ENST00000587268 UNC13AQ9UPW8 1703 aa43.76■■■■■ 4.6
PSMC3IP-205ENST00000587268 BICRAQ9NZM4 1560 aa43.6■■■■■ 4.57
PSMC3IP-205ENST00000587268 ZCCHC6Q5VYS8 1495 aaKnown RBP43.53■■■■■ 4.56
PSMC3IP-205ENST00000587268 DCAF1Q9Y4B6 1507 aa43.51■■■■■ 4.56
PSMC3IP-205ENST00000587268 SHROOM4Q9ULL8 1493 aa43.23■■■■■ 4.51
PSMC3IP-205ENST00000587268 SCRIBQ14160 1630 aa42.86■■■■■ 4.45
PSMC3IP-205ENST00000587268 CC2D2AQ9P2K1 1620 aa42.64■■■■■ 4.42
PSMC3IP-205ENST00000587268 CECR2Q9BXF3 1484 aa42.58■■■■■ 4.41
PSMC3IP-205ENST00000587268 EIF4G1Q04637 1599 aaKnown RBP42.56■■■■■ 4.4
PSMC3IP-205ENST00000587268 NCAPD3P42695 1498 aa41.28■■■■■ 4.2
PSMC3IP-205ENST00000587268 ATAD2BQ9ULI0 1458 aa41.09■■■■■ 4.17
PSMC3IP-205ENST00000587268 SMARCA2P51531 1590 aa40.99■■■■■ 4.15
PSMC3IP-205ENST00000587268 SMARCA4P51532 1647 aa40.96■■■■■ 4.15
PSMC3IP-205ENST00000587268 HMGXB3Q12766 1538 aa40.93■■■■■ 4.14
PSMC3IP-205ENST00000587268 DNAJC5Q9H3Z4 198 aa40.92■■■■■ 4.14
PSMC3IP-205ENST00000587268 CUX2O14529 1486 aa40.85■■■■■ 4.13
PSMC3IP-205ENST00000587268 BAZ1AQ9NRL2 1556 aaPredicted RBP40.82■■■■■ 4.12
PSMC3IP-205ENST00000587268 ERCC6Q03468 1493 aa40.8■■■■■ 4.12
PSMC3IP-205ENST00000587268 PEG3Q9GZU2 1588 aa40.66■■■■■ 4.1
PSMC3IP-205ENST00000587268 BAZ1BQ9UIG0 1483 aaKnown RBP40.66■■■■■ 4.1
PSMC3IP-205ENST00000587268 NESP48681 1621 aa40.49■■■■■ 4.07
PSMC3IP-205ENST00000587268 MROH2BQ7Z745 1585 aa40.43■■■■■ 4.06
PSMC3IP-205ENST00000587268 LAMC3Q9Y6N6 1575 aa40.31■■■■■ 4.04
PSMC3IP-205ENST00000587268 PDS5BQ9NTI5 1447 aa40.14■■■■■ 4.02
PSMC3IP-205ENST00000587268 THOC2Q8NI27 1593 aaKnown RBP40.13■■■■■ 4.01
PSMC3IP-205ENST00000587268 CADPSQ9ULU8 1353 aa40■■■■□ 3.99
PSMC3IP-205ENST00000587268 KIF21AQ7Z4S6 1674 aa39.91■■■■□ 3.98
PSMC3IP-205ENST00000587268 WIZO95785 1651 aa39.86■■■■□ 3.97
PSMC3IP-205ENST00000587268 MRC2Q9UBG0 1479 aa39.74■■■■□ 3.95
PSMC3IP-205ENST00000587268 WDR62O43379 1518 aa39.64■■■■□ 3.94
PSMC3IP-205ENST00000587268 RSF1Q96T23 1441 aaPredicted RBP39.62■■■■□ 3.93
PSMC3IP-205ENST00000587268 CEP164Q9UPV0 1460 aa39.56■■■■□ 3.92
PSMC3IP-205ENST00000587268 CFTRP13569 1480 aa39.53■■■■□ 3.92
PSMC3IP-205ENST00000587268 FANCD2Q9BXW9 1451 aa39.49■■■■□ 3.91
PSMC3IP-205ENST00000587268 TOP2AP11388 1531 aaKnown RBP39.47■■■■□ 3.91
PSMC3IP-205ENST00000587268 URB2Q14146 1524 aaKnown RBP39.14■■■■□ 3.86
PSMC3IP-205ENST00000587268 CCDC88BA6NC98 1476 aa39.01■■■■□ 3.84
PSMC3IP-205ENST00000587268 OSCARQ8IYS5 282 aa38.97■■■■□ 3.83
PSMC3IP-205ENST00000587268 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
PSMC3IP-205ENST00000587268 TRIM41Q8WV44 630 aa38.93■■■■□ 3.82
PSMC3IP-205ENST00000587268 IFT140Q96RY7 1462 aa38.8■■■■□ 3.8
PSMC3IP-205ENST00000587268 ABCC8Q09428 1581 aa38.75■■■■□ 3.79
PSMC3IP-205ENST00000587268 TOPBP1Q92547 1522 aa38.73■■■■□ 3.79
PSMC3IP-205ENST00000587268 ZNF608Q9ULD9 1512 aaPredicted RBP38.64■■■■□ 3.78
PSMC3IP-205ENST00000587268 DNMBPQ6XZF7 1577 aa38.58■■■■□ 3.77
PSMC3IP-205ENST00000587268 EIF4G3O43432 1585 aaKnown RBP38.42■■■■□ 3.74
PSMC3IP-205ENST00000587268 TARBP1Q13395 1621 aaKnown RBP38.36■■■■□ 3.73
PSMC3IP-205ENST00000587268 RIMBP3CA6NJZ7 1639 aa38.33■■■■□ 3.73
PSMC3IP-205ENST00000587268 RIMBP3BA6NNM3 1639 aa38.33■■■■□ 3.73
PSMC3IP-205ENST00000587268 RIMBP3Q9UFD9 1639 aa38.33■■■■□ 3.73
PSMC3IP-205ENST00000587268 POLA1P09884 1462 aaPredicted RBP38.33■■■■□ 3.73
PSMC3IP-205ENST00000587268 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.72
PSMC3IP-205ENST00000587268 ARHGEF11O15085 1522 aa38.25■■■■□ 3.71
PSMC3IP-205ENST00000587268 SOGA1O94964 1423 aa38.18■■■■□ 3.7
PSMC3IP-205ENST00000587268 RAD54L2Q9Y4B4 1467 aa38.12■■■■□ 3.69
PSMC3IP-205ENST00000587268 WDR97A6NE52 1622 aa38.1■■■■□ 3.69
PSMC3IP-205ENST00000587268 CHD1O14646 1710 aa38.08■■■■□ 3.69
PSMC3IP-205ENST00000587268 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
PSMC3IP-205ENST00000587268 FGD5Q6ZNL6 1462 aa38.05■■■■□ 3.68
PSMC3IP-205ENST00000587268 FBLN2P98095 1184 aa38.05■■■■□ 3.68
PSMC3IP-205ENST00000587268 CUX1P39880 1505 aa37.99■■■■□ 3.67
PSMC3IP-205ENST00000587268 CYB5RLQ6IPT4 315 aa37.97■■■■□ 3.67
PSMC3IP-205ENST00000587268 SNAPC4Q5SXM2 1469 aa37.92■■■■□ 3.66
PSMC3IP-205ENST00000587268 MAGI1Q96QZ7 1491 aaPredicted RBP37.9■■■■□ 3.66
PSMC3IP-205ENST00000587268 GRIN2BQ13224 1484 aa37.88■■■■□ 3.65
PSMC3IP-205ENST00000587268 ARAP1Q96P48 1450 aa37.87■■■■□ 3.65
PSMC3IP-205ENST00000587268 CHMP7Q8WUX9 453 aaPredicted RBP37.84■■■■□ 3.65
PSMC3IP-205ENST00000587268 CLASP1Q7Z460 1538 aa37.77■■■■□ 3.64
PSMC3IP-205ENST00000587268 SYNJ2O15056 1496 aa37.76■■■■□ 3.63
PSMC3IP-205ENST00000587268 SYNJ1O43426 1573 aa37.76■■■■□ 3.63
PSMC3IP-205ENST00000587268 GAPVD1Q14C86 1478 aa37.71■■■■□ 3.63
PSMC3IP-205ENST00000587268 ABCA10Q8WWZ4 1543 aa37.68■■■■□ 3.62
PSMC3IP-205ENST00000587268 SUPT5HO00267 1087 aaKnown RBP37.68■■■■□ 3.62
PSMC3IP-205ENST00000587268 ABCA5Q8WWZ7 1642 aa37.57■■■■□ 3.6
PSMC3IP-205ENST00000587268 PBRM1Q86U86 1689 aa37.56■■■■□ 3.6
PSMC3IP-205ENST00000587268 TRHP20396 242 aaPredicted RBP37.56■■■■□ 3.6
PSMC3IP-205ENST00000587268 WRNQ14191 1432 aaPredicted RBP eCLIP37.53■■■■□ 3.6
PSMC3IP-205ENST00000587268 TOP2BQ02880 1626 aa37.39■■■■□ 3.58
PSMC3IP-205ENST00000587268 BIVM-ERCC5R4GMW8 1640 aa37.36■■■■□ 3.57
PSMC3IP-205ENST00000587268 GRIN2AQ12879 1464 aa37.35■■■■□ 3.57
PSMC3IP-205ENST00000587268 ADAMTS12P58397 1594 aa37.28■■■■□ 3.56
PSMC3IP-205ENST00000587268 NUP160Q12769 1436 aa37.27■■■■□ 3.56
PSMC3IP-205ENST00000587268 FHAD1B1AJZ9 1412 aa37.27■■■■□ 3.56
PSMC3IP-205ENST00000587268 ERICH3Q5RHP9 1530 aa37.21■■■■□ 3.55
PSMC3IP-205ENST00000587268 CEP170Q5SW79 1584 aa37.17■■■■□ 3.54
PSMC3IP-205ENST00000587268 ERCC6L2Q5T890 1561 aa37.07■■■■□ 3.52
PSMC3IP-205ENST00000587268 SHROOM2Q13796 1616 aa37.07■■■■□ 3.52
PSMC3IP-205ENST00000587268 JPH4Q96JJ6 628 aa36.89■■■■□ 3.5
PSMC3IP-205ENST00000587268 PRG4Q92954 1404 aaPredicted RBP36.87■■■■□ 3.49
PSMC3IP-205ENST00000587268 RUSC2Q8N2Y8 1516 aa36.75■■■■□ 3.47
PSMC3IP-205ENST00000587268 KIF27Q86VH2 1401 aa36.72■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms