RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 NISCHQ9Y2I1 1504 aa37.35■■■■□ 3.57
LRFN3-203ENST00000587257 ABCC9O60706 1549 aa34.11■■■■□ 3.05
LRFN3-203ENST00000587257 CCDC180Q9P1Z9 1646 aa33.67■■■□□ 2.98
LRFN3-203ENST00000587257 DNAJC5BQ9UF47 199 aa32.32■■■□□ 2.76
LRFN3-203ENST00000587257 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
LRFN3-203ENST00000587257 NACADO15069 1562 aa31.97■■■□□ 2.71
LRFN3-203ENST00000587257 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.67
LRFN3-203ENST00000587257 PABPN1Q86U42 306 aaKnown RBP eCLIP31.68■■■□□ 2.66
LRFN3-203ENST00000587257 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
LRFN3-203ENST00000587257 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
LRFN3-203ENST00000587257 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
LRFN3-203ENST00000587257 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
LRFN3-203ENST00000587257 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
LRFN3-203ENST00000587257 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
LRFN3-203ENST00000587257 CECR2Q9BXF3 1484 aa30.79■■■□□ 2.52
LRFN3-203ENST00000587257 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.52
LRFN3-203ENST00000587257 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
LRFN3-203ENST00000587257 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
LRFN3-203ENST00000587257 DNAJC5Q9H3Z4 198 aa30.03■■■□□ 2.4
LRFN3-203ENST00000587257 CUX2O14529 1486 aa29.61■■■□□ 2.33
LRFN3-203ENST00000587257 NCAPD3P42695 1498 aa29.53■■■□□ 2.32
LRFN3-203ENST00000587257 ERCC6Q03468 1493 aa29.53■■■□□ 2.32
LRFN3-203ENST00000587257 ATAD2BQ9ULI0 1458 aa29.37■■■□□ 2.29
LRFN3-203ENST00000587257 SMARCA2P51531 1590 aa29.27■■■□□ 2.28
LRFN3-203ENST00000587257 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
LRFN3-203ENST00000587257 SMARCA4P51532 1647 aa29.2■■■□□ 2.27
LRFN3-203ENST00000587257 NESP48681 1621 aa29.16■■■□□ 2.26
LRFN3-203ENST00000587257 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
LRFN3-203ENST00000587257 BAZ1AQ9NRL2 1556 aaPredicted RBP29.03■■■□□ 2.24
LRFN3-203ENST00000587257 THOC2Q8NI27 1593 aaKnown RBP28.95■■■□□ 2.22
LRFN3-203ENST00000587257 PEG3Q9GZU2 1588 aa28.93■■■□□ 2.22
LRFN3-203ENST00000587257 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
LRFN3-203ENST00000587257 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
LRFN3-203ENST00000587257 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
LRFN3-203ENST00000587257 KIF21AQ7Z4S6 1674 aa28.71■■■□□ 2.19
LRFN3-203ENST00000587257 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
LRFN3-203ENST00000587257 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
LRFN3-203ENST00000587257 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
LRFN3-203ENST00000587257 WDR62O43379 1518 aa28.49■■■□□ 2.15
LRFN3-203ENST00000587257 CEP164Q9UPV0 1460 aa28.37■■■□□ 2.13
LRFN3-203ENST00000587257 WIZO95785 1651 aa28.34■■■□□ 2.13
LRFN3-203ENST00000587257 FANCD2Q9BXW9 1451 aa28.29■■■□□ 2.12
LRFN3-203ENST00000587257 CFTRP13569 1480 aa28.2■■■□□ 2.1
LRFN3-203ENST00000587257 OSCARQ8IYS5 282 aa28.17■■■□□ 2.1
LRFN3-203ENST00000587257 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
LRFN3-203ENST00000587257 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
LRFN3-203ENST00000587257 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
LRFN3-203ENST00000587257 IFT140Q96RY7 1462 aa27.83■■■□□ 2.04
LRFN3-203ENST00000587257 RIMBP3CA6NJZ7 1639 aa27.8■■■□□ 2.04
LRFN3-203ENST00000587257 RIMBP3BA6NNM3 1639 aa27.8■■■□□ 2.04
LRFN3-203ENST00000587257 RIMBP3Q9UFD9 1639 aa27.8■■■□□ 2.04
LRFN3-203ENST00000587257 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
LRFN3-203ENST00000587257 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
LRFN3-203ENST00000587257 ARHGEF11O15085 1522 aa27.72■■■□□ 2.03
LRFN3-203ENST00000587257 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.02
LRFN3-203ENST00000587257 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
LRFN3-203ENST00000587257 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
LRFN3-203ENST00000587257 EIF4G3O43432 1585 aaKnown RBP27.61■■■□□ 2.01
LRFN3-203ENST00000587257 DNMBPQ6XZF7 1577 aa27.55■■■□□ 2
LRFN3-203ENST00000587257 CYB5RLQ6IPT4 315 aa27.53■■■□□ 2
LRFN3-203ENST00000587257 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.99
LRFN3-203ENST00000587257 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.98
LRFN3-203ENST00000587257 CHD1O14646 1710 aa27.41■■□□□ 1.98
LRFN3-203ENST00000587257 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
LRFN3-203ENST00000587257 FBLN2P98095 1184 aa27.41■■□□□ 1.98
LRFN3-203ENST00000587257 POLA1P09884 1462 aaPredicted RBP27.39■■□□□ 1.98
LRFN3-203ENST00000587257 TRHP20396 242 aaPredicted RBP27.37■■□□□ 1.97
LRFN3-203ENST00000587257 RAD54L2Q9Y4B4 1467 aa27.27■■□□□ 1.96
LRFN3-203ENST00000587257 SOGA1O94964 1423 aa27.25■■□□□ 1.95
LRFN3-203ENST00000587257 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
LRFN3-203ENST00000587257 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
LRFN3-203ENST00000587257 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
LRFN3-203ENST00000587257 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
LRFN3-203ENST00000587257 FGD5Q6ZNL6 1462 aa27.16■■□□□ 1.94
LRFN3-203ENST00000587257 MAGI1Q96QZ7 1491 aaPredicted RBP27.14■■□□□ 1.94
LRFN3-203ENST00000587257 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
LRFN3-203ENST00000587257 SYNJ1O43426 1573 aa27.13■■□□□ 1.93
LRFN3-203ENST00000587257 GRIN2BQ13224 1484 aa27.09■■□□□ 1.93
LRFN3-203ENST00000587257 SYNJ2O15056 1496 aa27.05■■□□□ 1.92
LRFN3-203ENST00000587257 CUX1P39880 1505 aa27.05■■□□□ 1.92
LRFN3-203ENST00000587257 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
LRFN3-203ENST00000587257 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
LRFN3-203ENST00000587257 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
LRFN3-203ENST00000587257 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
LRFN3-203ENST00000587257 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
LRFN3-203ENST00000587257 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
LRFN3-203ENST00000587257 ERCC6L2Q5T890 1561 aa26.67■■□□□ 1.86
LRFN3-203ENST00000587257 NUP160Q12769 1436 aa26.66■■□□□ 1.86
LRFN3-203ENST00000587257 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
LRFN3-203ENST00000587257 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
LRFN3-203ENST00000587257 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
LRFN3-203ENST00000587257 FHAD1B1AJZ9 1412 aa26.58■■□□□ 1.85
LRFN3-203ENST00000587257 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
LRFN3-203ENST00000587257 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
LRFN3-203ENST00000587257 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
LRFN3-203ENST00000587257 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
LRFN3-203ENST00000587257 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
LRFN3-203ENST00000587257 PRG4Q92954 1404 aaPredicted RBP26.44■■□□□ 1.82
LRFN3-203ENST00000587257 JPH4Q96JJ6 628 aa26.37■■□□□ 1.81
LRFN3-203ENST00000587257 KIF13AQ9H1H9 1805 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms