RNA–Protein interactions for RNA: ENST00000587155.1

TNPO2-207, Transcript of transportin 2, humanhuman

TSL 4

Gene TNPO2, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-207ENST00000587155 NISCHQ9Y2I1 1504 aa59.83■■■■■ 7.17
TNPO2-207ENST00000587155 CCDC180Q9P1Z9 1646 aa53.04■■■■■ 6.08
TNPO2-207ENST00000587155 ABCC9O60706 1549 aa52.08■■■■■ 5.93
TNPO2-207ENST00000587155 DCAF8L2P0C7V8 631 aa50.25■■■■■ 5.63
TNPO2-207ENST00000587155 RB1CC1Q8TDY2 1594 aa50■■■■■ 5.59
TNPO2-207ENST00000587155 NACADO15069 1562 aa49.95■■■■■ 5.59
TNPO2-207ENST00000587155 ZCCHC6Q5VYS8 1495 aaKnown RBP49.79■■■■■ 5.56
TNPO2-207ENST00000587155 MYO15BQ96JP2 1530 aa49.6■■■■■ 5.53
TNPO2-207ENST00000587155 DCAF1Q9Y4B6 1507 aa49.42■■■■■ 5.5
TNPO2-207ENST00000587155 UNC13AQ9UPW8 1703 aa48.82■■■■■ 5.41
TNPO2-207ENST00000587155 PABPN1Q86U42 306 aaKnown RBP eCLIP48.78■■■■■ 5.4
TNPO2-207ENST00000587155 SCRIBQ14160 1630 aa48.52■■■■■ 5.36
TNPO2-207ENST00000587155 BICRAQ9NZM4 1560 aa48.5■■■■■ 5.35
TNPO2-207ENST00000587155 DNAJC5BQ9UF47 199 aa47.88■■■■■ 5.26
TNPO2-207ENST00000587155 SHROOM4Q9ULL8 1493 aa47.88■■■■■ 5.26
TNPO2-207ENST00000587155 EIF4G1Q04637 1599 aaKnown RBP47.22■■■■■ 5.15
TNPO2-207ENST00000587155 CC2D2AQ9P2K1 1620 aa47.04■■■■■ 5.12
TNPO2-207ENST00000587155 CECR2Q9BXF3 1484 aa46.76■■■■■ 5.08
TNPO2-207ENST00000587155 SMARCA4P51532 1647 aa46.37■■■■■ 5.01
TNPO2-207ENST00000587155 BAZ1AQ9NRL2 1556 aaPredicted RBP46.34■■■■■ 5.01
TNPO2-207ENST00000587155 ATAD2BQ9ULI0 1458 aa46.18■■■■■ 4.98
TNPO2-207ENST00000587155 NCAPD3P42695 1498 aa46.14■■■■■ 4.98
TNPO2-207ENST00000587155 MROH2BQ7Z745 1585 aa46.13■■■■■ 4.98
TNPO2-207ENST00000587155 SMARCA2P51531 1590 aa46.06■■■■■ 4.96
TNPO2-207ENST00000587155 PEG3Q9GZU2 1588 aa45.88■■■■■ 4.93
TNPO2-207ENST00000587155 HMGXB3Q12766 1538 aa45.82■■■■■ 4.93
TNPO2-207ENST00000587155 BAZ1BQ9UIG0 1483 aaKnown RBP45.8■■■■■ 4.92
TNPO2-207ENST00000587155 RSF1Q96T23 1441 aaPredicted RBP45.64■■■■■ 4.9
TNPO2-207ENST00000587155 WIZO95785 1651 aa45.63■■■■■ 4.89
TNPO2-207ENST00000587155 TOP2AP11388 1531 aaKnown RBP45.09■■■■■ 4.81
TNPO2-207ENST00000587155 NESP48681 1621 aa45.07■■■■■ 4.81
TNPO2-207ENST00000587155 LAMC3Q9Y6N6 1575 aa44.86■■■■■ 4.77
TNPO2-207ENST00000587155 ERCC6Q03468 1493 aa44.86■■■■■ 4.77
TNPO2-207ENST00000587155 CADPSQ9ULU8 1353 aa44.84■■■■■ 4.77
TNPO2-207ENST00000587155 SUPT5HO00267 1087 aaKnown RBP44.68■■■■■ 4.74
TNPO2-207ENST00000587155 CCDC88BA6NC98 1476 aa44.66■■■■■ 4.74
TNPO2-207ENST00000587155 PDS5BQ9NTI5 1447 aa44.64■■■■■ 4.74
TNPO2-207ENST00000587155 CFTRP13569 1480 aa44.53■■■■■ 4.72
TNPO2-207ENST00000587155 KIF21AQ7Z4S6 1674 aa44.43■■■■■ 4.7
TNPO2-207ENST00000587155 CUX2O14529 1486 aa44.3■■■■■ 4.68
TNPO2-207ENST00000587155 FANCD2Q9BXW9 1451 aa44.29■■■■■ 4.68
TNPO2-207ENST00000587155 THOC2Q8NI27 1593 aaKnown RBP44.25■■■■■ 4.67
TNPO2-207ENST00000587155 CEP164Q9UPV0 1460 aa44.21■■■■■ 4.67
TNPO2-207ENST00000587155 MRC2Q9UBG0 1479 aa44.14■■■■■ 4.66
TNPO2-207ENST00000587155 PRDM2Q13029 1718 aa44.04■■■■■ 4.64
TNPO2-207ENST00000587155 WDR62O43379 1518 aa43.95■■■■■ 4.63
TNPO2-207ENST00000587155 URB2Q14146 1524 aaKnown RBP43.84■■■■■ 4.61
TNPO2-207ENST00000587155 TOPBP1Q92547 1522 aa43.58■■■■■ 4.57
TNPO2-207ENST00000587155 ABCC8Q09428 1581 aa43.57■■■■■ 4.57
TNPO2-207ENST00000587155 DNMBPQ6XZF7 1577 aa43.49■■■■■ 4.55
TNPO2-207ENST00000587155 IFT140Q96RY7 1462 aa43.29■■■■■ 4.52
TNPO2-207ENST00000587155 CUX1P39880 1505 aa43.26■■■■■ 4.52
TNPO2-207ENST00000587155 POLA1P09884 1462 aaPredicted RBP43.2■■■■■ 4.51
TNPO2-207ENST00000587155 ZNF608Q9ULD9 1512 aaPredicted RBP43.13■■■■■ 4.5
TNPO2-207ENST00000587155 FGD5Q6ZNL6 1462 aa43.13■■■■■ 4.49
TNPO2-207ENST00000587155 SOGA1O94964 1423 aa43.11■■■■■ 4.49
TNPO2-207ENST00000587155 RAD54L2Q9Y4B4 1467 aa43.09■■■■■ 4.49
TNPO2-207ENST00000587155 DNAJC5Q9H3Z4 198 aa43.06■■■■■ 4.48
TNPO2-207ENST00000587155 TARBP1Q13395 1621 aaKnown RBP43.05■■■■■ 4.48
TNPO2-207ENST00000587155 WRNQ14191 1432 aaPredicted RBP eCLIP43.03■■■■■ 4.48
TNPO2-207ENST00000587155 AQRO60306 1485 aaKnown RBP eCLIP42.94■■■■■ 4.475e-7■■■■□ 19.7
TNPO2-207ENST00000587155 TDRD9Q8NDG6 1382 aaKnown RBP42.9■■■■■ 4.46
TNPO2-207ENST00000587155 SYNJ1O43426 1573 aa42.87■■■■■ 4.45
TNPO2-207ENST00000587155 EIF4G3O43432 1585 aaKnown RBP42.87■■■■■ 4.45
TNPO2-207ENST00000587155 TOP2BQ02880 1626 aa42.86■■■■■ 4.45
TNPO2-207ENST00000587155 BIVM-ERCC5R4GMW8 1640 aa42.82■■■■■ 4.44
TNPO2-207ENST00000587155 ABCA10Q8WWZ4 1543 aa42.67■■■■■ 4.42
TNPO2-207ENST00000587155 OSCARQ8IYS5 282 aa42.64■■■■■ 4.42
TNPO2-207ENST00000587155 WDR97A6NE52 1622 aa42.64■■■■■ 4.42
TNPO2-207ENST00000587155 GAPVD1Q14C86 1478 aa42.56■■■■■ 4.4
TNPO2-207ENST00000587155 GRIN2BQ13224 1484 aa42.53■■■■■ 4.4
TNPO2-207ENST00000587155 FBLN2P98095 1184 aa42.52■■■■■ 4.4
TNPO2-207ENST00000587155 SNAPC4Q5SXM2 1469 aa42.48■■■■■ 4.39
TNPO2-207ENST00000587155 ABCA5Q8WWZ7 1642 aa42.45■■■■■ 4.39
TNPO2-207ENST00000587155 MAGI1Q96QZ7 1491 aaPredicted RBP42.38■■■■■ 4.38
TNPO2-207ENST00000587155 PBRM1Q86U86 1689 aa42.37■■■■■ 4.37
TNPO2-207ENST00000587155 CHMP7Q8WUX9 453 aaPredicted RBP42.36■■■■■ 4.37
TNPO2-207ENST00000587155 CHD1O14646 1710 aa42.33■■■■■ 4.37
TNPO2-207ENST00000587155 SYNJ2O15056 1496 aa42.24■■■■■ 4.35
TNPO2-207ENST00000587155 TRIM41Q8WV44 630 aa42.17■■■■■ 4.34
TNPO2-207ENST00000587155 ERICH3Q5RHP9 1530 aa42.15■■■■■ 4.34
TNPO2-207ENST00000587155 KIF27Q86VH2 1401 aa42.13■■■■■ 4.34
TNPO2-207ENST00000587155 FHAD1B1AJZ9 1412 aa42.06■■■■■ 4.32
TNPO2-207ENST00000587155 ADAMTS12P58397 1594 aa42.05■■■■■ 4.32
TNPO2-207ENST00000587155 IGF1RP08069 1367 aa42.01■■■■■ 4.31
TNPO2-207ENST00000587155 GRIN2AQ12879 1464 aa41.98■■■■■ 4.31
TNPO2-207ENST00000587155 CLASP1Q7Z460 1538 aa41.88■■■■■ 4.29
TNPO2-207ENST00000587155 ARHGEF11O15085 1522 aa41.82■■■■■ 4.29
TNPO2-207ENST00000587155 RUSC2Q8N2Y8 1516 aa41.82■■■■■ 4.29
TNPO2-207ENST00000587155 RIMBP3CA6NJZ7 1639 aa41.8■■■■■ 4.28
TNPO2-207ENST00000587155 RIMBP3BA6NNM3 1639 aa41.8■■■■■ 4.28
TNPO2-207ENST00000587155 RIMBP3Q9UFD9 1639 aa41.8■■■■■ 4.28
TNPO2-207ENST00000587155 NUP160Q12769 1436 aa41.78■■■■■ 4.28
TNPO2-207ENST00000587155 CARMIL1Q5VZK9 1371 aa41.76■■■■■ 4.27
TNPO2-207ENST00000587155 CEP170Q5SW79 1584 aa41.75■■■■■ 4.27
TNPO2-207ENST00000587155 CUL7Q14999 1698 aa41.73■■■■■ 4.27
TNPO2-207ENST00000587155 CHIC1Q5VXU3 224 aa41.68■■■■■ 4.26
TNPO2-207ENST00000587155 CYB5RLQ6IPT4 315 aa41.61■■■■■ 4.25
TNPO2-207ENST00000587155 JPH4Q96JJ6 628 aa41.5■■■■■ 4.23
TNPO2-207ENST00000587155 ARAP1Q96P48 1450 aa41.49■■■■■ 4.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms