RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
CCDC130-207ENST00000587098 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
CCDC130-207ENST00000587098 ABCC9O60706 1549 aa31.09■■■□□ 2.57
CCDC130-207ENST00000587098 DCAF8L2P0C7V8 631 aa29.91■■■□□ 2.38
CCDC130-207ENST00000587098 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
CCDC130-207ENST00000587098 NACADO15069 1562 aa29.77■■■□□ 2.36
CCDC130-207ENST00000587098 ZCCHC6Q5VYS8 1495 aaKnown RBP29.62■■■□□ 2.33
CCDC130-207ENST00000587098 MYO15BQ96JP2 1530 aa29.56■■■□□ 2.32
CCDC130-207ENST00000587098 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
CCDC130-207ENST00000587098 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
CCDC130-207ENST00000587098 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.25
CCDC130-207ENST00000587098 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
CCDC130-207ENST00000587098 SCRIBQ14160 1630 aa28.89■■■□□ 2.22
CCDC130-207ENST00000587098 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
CCDC130-207ENST00000587098 SHROOM4Q9ULL8 1493 aa28.56■■■□□ 2.16
CCDC130-207ENST00000587098 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
CCDC130-207ENST00000587098 CC2D2AQ9P2K1 1620 aa28.08■■■□□ 2.09
CCDC130-207ENST00000587098 CECR2Q9BXF3 1484 aa27.93■■■□□ 2.06
CCDC130-207ENST00000587098 SMARCA4P51532 1647 aa27.62■■■□□ 2.01
CCDC130-207ENST00000587098 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
CCDC130-207ENST00000587098 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
CCDC130-207ENST00000587098 NCAPD3P42695 1498 aa27.52■■■□□ 2
CCDC130-207ENST00000587098 MROH2BQ7Z745 1585 aa27.47■■□□□ 1.99
CCDC130-207ENST00000587098 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
CCDC130-207ENST00000587098 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
CCDC130-207ENST00000587098 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
CCDC130-207ENST00000587098 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
CCDC130-207ENST00000587098 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
CCDC130-207ENST00000587098 WIZO95785 1651 aa27.15■■□□□ 1.94
CCDC130-207ENST00000587098 NESP48681 1621 aa26.9■■□□□ 1.9
CCDC130-207ENST00000587098 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
CCDC130-207ENST00000587098 ERCC6Q03468 1493 aa26.77■■□□□ 1.88
CCDC130-207ENST00000587098 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
CCDC130-207ENST00000587098 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
CCDC130-207ENST00000587098 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
CCDC130-207ENST00000587098 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
CCDC130-207ENST00000587098 CFTRP13569 1480 aa26.54■■□□□ 1.84
CCDC130-207ENST00000587098 KIF21AQ7Z4S6 1674 aa26.51■■□□□ 1.83
CCDC130-207ENST00000587098 CUX2O14529 1486 aa26.49■■□□□ 1.83
CCDC130-207ENST00000587098 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
CCDC130-207ENST00000587098 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
CCDC130-207ENST00000587098 FANCD2Q9BXW9 1451 aa26.4■■□□□ 1.82
CCDC130-207ENST00000587098 CEP164Q9UPV0 1460 aa26.35■■□□□ 1.81
CCDC130-207ENST00000587098 MRC2Q9UBG0 1479 aa26.33■■□□□ 1.81
CCDC130-207ENST00000587098 PRDM2Q13029 1718 aa26.23■■□□□ 1.79
CCDC130-207ENST00000587098 WDR62O43379 1518 aa26.22■■□□□ 1.79
CCDC130-207ENST00000587098 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
CCDC130-207ENST00000587098 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
CCDC130-207ENST00000587098 ABCC8Q09428 1581 aa25.95■■□□□ 1.74
CCDC130-207ENST00000587098 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
CCDC130-207ENST00000587098 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
CCDC130-207ENST00000587098 IFT140Q96RY7 1462 aa25.81■■□□□ 1.72
CCDC130-207ENST00000587098 CUX1P39880 1505 aa25.76■■□□□ 1.71
CCDC130-207ENST00000587098 POLA1P09884 1462 aaPredicted RBP25.74■■□□□ 1.71
CCDC130-207ENST00000587098 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
CCDC130-207ENST00000587098 RAD54L2Q9Y4B4 1467 aa25.68■■□□□ 1.7
CCDC130-207ENST00000587098 SOGA1O94964 1423 aa25.68■■□□□ 1.7
CCDC130-207ENST00000587098 FGD5Q6ZNL6 1462 aa25.67■■□□□ 1.7
CCDC130-207ENST00000587098 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
CCDC130-207ENST00000587098 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.69
CCDC130-207ENST00000587098 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
CCDC130-207ENST00000587098 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
CCDC130-207ENST00000587098 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
CCDC130-207ENST00000587098 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
CCDC130-207ENST00000587098 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
CCDC130-207ENST00000587098 OSCARQ8IYS5 282 aa25.49■■□□□ 1.67
CCDC130-207ENST00000587098 BIVM-ERCC5R4GMW8 1640 aa25.47■■□□□ 1.67
CCDC130-207ENST00000587098 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
CCDC130-207ENST00000587098 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
CCDC130-207ENST00000587098 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
CCDC130-207ENST00000587098 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
CCDC130-207ENST00000587098 FBLN2P98095 1184 aa25.34■■□□□ 1.65
CCDC130-207ENST00000587098 SNAPC4Q5SXM2 1469 aa25.32■■□□□ 1.64
CCDC130-207ENST00000587098 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
CCDC130-207ENST00000587098 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
CCDC130-207ENST00000587098 CHD1O14646 1710 aa25.26■■□□□ 1.63
CCDC130-207ENST00000587098 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
CCDC130-207ENST00000587098 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
CCDC130-207ENST00000587098 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
CCDC130-207ENST00000587098 ERICH3Q5RHP9 1530 aa25.09■■□□□ 1.61
CCDC130-207ENST00000587098 FHAD1B1AJZ9 1412 aa25.05■■□□□ 1.6
CCDC130-207ENST00000587098 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
CCDC130-207ENST00000587098 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
CCDC130-207ENST00000587098 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
CCDC130-207ENST00000587098 IGF1RP08069 1367 aa25.01■■□□□ 1.59
CCDC130-207ENST00000587098 TRIM41Q8WV44 630 aa25■■□□□ 1.59
CCDC130-207ENST00000587098 RIMBP3CA6NJZ7 1639 aa25■■□□□ 1.59
CCDC130-207ENST00000587098 RIMBP3BA6NNM3 1639 aa25■■□□□ 1.59
CCDC130-207ENST00000587098 RIMBP3Q9UFD9 1639 aa25■■□□□ 1.59
CCDC130-207ENST00000587098 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
CCDC130-207ENST00000587098 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
CCDC130-207ENST00000587098 NUP160Q12769 1436 aa24.92■■□□□ 1.58
CCDC130-207ENST00000587098 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
CCDC130-207ENST00000587098 CYB5RLQ6IPT4 315 aa24.86■■□□□ 1.57
CCDC130-207ENST00000587098 RUSC2Q8N2Y8 1516 aa24.86■■□□□ 1.57
CCDC130-207ENST00000587098 CARMIL1Q5VZK9 1371 aa24.85■■□□□ 1.57
CCDC130-207ENST00000587098 CUL7Q14999 1698 aa24.81■■□□□ 1.56
CCDC130-207ENST00000587098 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
CCDC130-207ENST00000587098 JPH4Q96JJ6 628 aa24.74■■□□□ 1.55
CCDC130-207ENST00000587098 SHROOM2Q13796 1616 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms