RNA–Protein interactions for RNA: ENST00000586958.1

SPRED3-203, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 2

Gene SPRED3, Length 478 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-203ENST00000586958 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
SPRED3-203ENST00000586958 ABCC9O60706 1549 aa31.77■■■□□ 2.68
SPRED3-203ENST00000586958 DNAJC5BQ9UF47 199 aa31.21■■■□□ 2.59
SPRED3-203ENST00000586958 CCDC180Q9P1Z9 1646 aa30.16■■■□□ 2.42
SPRED3-203ENST00000586958 DNAJC5Q9H3Z4 198 aa29.66■■■□□ 2.34
SPRED3-203ENST00000586958 RB1CC1Q8TDY2 1594 aa29.48■■■□□ 2.31
SPRED3-203ENST00000586958 PABPN1Q86U42 306 aaKnown RBP eCLIP29.42■■■□□ 2.3
SPRED3-203ENST00000586958 NACADO15069 1562 aa28.93■■■□□ 2.22
SPRED3-203ENST00000586958 CECR2Q9BXF3 1484 aa28.75■■■□□ 2.19
SPRED3-203ENST00000586958 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
SPRED3-203ENST00000586958 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
SPRED3-203ENST00000586958 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
SPRED3-203ENST00000586958 CC2D2AQ9P2K1 1620 aa28.56■■■□□ 2.16
SPRED3-203ENST00000586958 EIF4G1Q04637 1599 aaKnown RBP28.14■■■□□ 2.1
SPRED3-203ENST00000586958 SHROOM4Q9ULL8 1493 aa28.11■■■□□ 2.09
SPRED3-203ENST00000586958 MYO15BQ96JP2 1530 aa28.04■■■□□ 2.08
SPRED3-203ENST00000586958 CUX2O14529 1486 aa27.91■■■□□ 2.06
SPRED3-203ENST00000586958 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
SPRED3-203ENST00000586958 SCRIBQ14160 1630 aa27.5■■□□□ 1.99
SPRED3-203ENST00000586958 ERCC6Q03468 1493 aa27.5■■□□□ 1.99
SPRED3-203ENST00000586958 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
SPRED3-203ENST00000586958 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
SPRED3-203ENST00000586958 NESP48681 1621 aa26.88■■□□□ 1.89
SPRED3-203ENST00000586958 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
SPRED3-203ENST00000586958 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
SPRED3-203ENST00000586958 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
SPRED3-203ENST00000586958 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
SPRED3-203ENST00000586958 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
SPRED3-203ENST00000586958 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
SPRED3-203ENST00000586958 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
SPRED3-203ENST00000586958 BAZ1AQ9NRL2 1556 aaPredicted RBP26.39■■□□□ 1.82
SPRED3-203ENST00000586958 KIF21AQ7Z4S6 1674 aa26.35■■□□□ 1.81
SPRED3-203ENST00000586958 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
SPRED3-203ENST00000586958 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
SPRED3-203ENST00000586958 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
SPRED3-203ENST00000586958 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
SPRED3-203ENST00000586958 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
SPRED3-203ENST00000586958 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
SPRED3-203ENST00000586958 TRHP20396 242 aaPredicted RBP26.16■■□□□ 1.78
SPRED3-203ENST00000586958 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
SPRED3-203ENST00000586958 WDR62O43379 1518 aa26.13■■□□□ 1.77
SPRED3-203ENST00000586958 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
SPRED3-203ENST00000586958 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
SPRED3-203ENST00000586958 CYB5RLQ6IPT4 315 aa25.99■■□□□ 1.75
SPRED3-203ENST00000586958 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
SPRED3-203ENST00000586958 PEG3Q9GZU2 1588 aa25.8■■□□□ 1.72
SPRED3-203ENST00000586958 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
SPRED3-203ENST00000586958 ARAP1Q96P48 1450 aa25.68■■□□□ 1.7
SPRED3-203ENST00000586958 ILDR1Q86SU0 546 aaPredicted RBP25.64■■□□□ 1.7
SPRED3-203ENST00000586958 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
SPRED3-203ENST00000586958 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
SPRED3-203ENST00000586958 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
SPRED3-203ENST00000586958 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
SPRED3-203ENST00000586958 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
SPRED3-203ENST00000586958 CFTRP13569 1480 aa25.31■■□□□ 1.64
SPRED3-203ENST00000586958 IFT140Q96RY7 1462 aa25.3■■□□□ 1.64
SPRED3-203ENST00000586958 FBLN2P98095 1184 aa25.21■■□□□ 1.63
SPRED3-203ENST00000586958 CHD1O14646 1710 aa25.2■■□□□ 1.63
SPRED3-203ENST00000586958 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
SPRED3-203ENST00000586958 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.6
SPRED3-203ENST00000586958 WIZO95785 1651 aa25.06■■□□□ 1.6
SPRED3-203ENST00000586958 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
SPRED3-203ENST00000586958 CLASP1Q7Z460 1538 aa24.95■■□□□ 1.58
SPRED3-203ENST00000586958 KDM4FA0A1W2PPD8 638 aa24.9■■□□□ 1.58
SPRED3-203ENST00000586958 GAPVD1Q14C86 1478 aa24.84■■□□□ 1.57
SPRED3-203ENST00000586958 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
SPRED3-203ENST00000586958 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
SPRED3-203ENST00000586958 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
SPRED3-203ENST00000586958 ABCC8Q09428 1581 aa24.75■■□□□ 1.55
SPRED3-203ENST00000586958 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
SPRED3-203ENST00000586958 SNAPC4Q5SXM2 1469 aa24.72■■□□□ 1.55
SPRED3-203ENST00000586958 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
SPRED3-203ENST00000586958 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
SPRED3-203ENST00000586958 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
SPRED3-203ENST00000586958 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
SPRED3-203ENST00000586958 RAD54L2Q9Y4B4 1467 aa24.61■■□□□ 1.53
SPRED3-203ENST00000586958 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
SPRED3-203ENST00000586958 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
SPRED3-203ENST00000586958 ERCC6L2Q5T890 1561 aa24.52■■□□□ 1.52
SPRED3-203ENST00000586958 SOGA1O94964 1423 aa24.52■■□□□ 1.52
SPRED3-203ENST00000586958 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
SPRED3-203ENST00000586958 FBXO41Q8TF61 875 aa24.45■■□□□ 1.5
SPRED3-203ENST00000586958 FAM69CQ0P6D2 419 aa24.44■■□□□ 1.5
SPRED3-203ENST00000586958 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
SPRED3-203ENST00000586958 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
SPRED3-203ENST00000586958 HECW2Q9P2P5 1572 aa24.39■■□□□ 1.5
SPRED3-203ENST00000586958 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
SPRED3-203ENST00000586958 KDM6BO15054 1643 aa24.36■■□□□ 1.49
SPRED3-203ENST00000586958 ABCC10Q5T3U5 1492 aa24.33■■□□□ 1.49
SPRED3-203ENST00000586958 CEP170Q5SW79 1584 aa24.28■■□□□ 1.48
SPRED3-203ENST00000586958 ADGRL1O94910 1474 aa24.27■■□□□ 1.48
SPRED3-203ENST00000586958 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
SPRED3-203ENST00000586958 LMTK3Q96Q04 1460 aa24.25■■□□□ 1.47
SPRED3-203ENST00000586958 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
SPRED3-203ENST00000586958 PBRM1Q86U86 1689 aa24.13■■□□□ 1.45
SPRED3-203ENST00000586958 NPM1P06748 294 aaKnown RBP eCLIP24.12■■□□□ 1.45
SPRED3-203ENST00000586958 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
SPRED3-203ENST00000586958 MAPKBP1O60336 1514 aa24.11■■□□□ 1.45
SPRED3-203ENST00000586958 NUP160Q12769 1436 aa24.1■■□□□ 1.45
SPRED3-203ENST00000586958 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms