RNA–Protein interactions for RNA: ENST00000586934.5

SAFB-204, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 995 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-204ENST00000586934 NISCHQ9Y2I1 1504 aa46.08■■■■■ 4.97
SAFB-204ENST00000586934 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
SAFB-204ENST00000586934 ABCC9O60706 1549 aa40.77■■■■■ 4.12
SAFB-204ENST00000586934 RB1CC1Q8TDY2 1594 aa38.98■■■■□ 3.83
SAFB-204ENST00000586934 NACADO15069 1562 aa38.82■■■■□ 3.8
SAFB-204ENST00000586934 DCAF8L2P0C7V8 631 aa38.74■■■■□ 3.79
SAFB-204ENST00000586934 MYO15BQ96JP2 1530 aa38.42■■■■□ 3.74
SAFB-204ENST00000586934 ZCCHC6Q5VYS8 1495 aaKnown RBP38.27■■■■□ 3.72
SAFB-204ENST00000586934 UNC13AQ9UPW8 1703 aa38.12■■■■□ 3.69
SAFB-204ENST00000586934 DCAF1Q9Y4B6 1507 aa38.08■■■■□ 3.69
SAFB-204ENST00000586934 PABPN1Q86U42 306 aaKnown RBP eCLIP38.05■■■■□ 3.68
SAFB-204ENST00000586934 DNAJC5BQ9UF47 199 aa37.92■■■■□ 3.66
SAFB-204ENST00000586934 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
SAFB-204ENST00000586934 SCRIBQ14160 1630 aa37.54■■■■□ 3.6
SAFB-204ENST00000586934 SHROOM4Q9ULL8 1493 aa37.34■■■■□ 3.57
SAFB-204ENST00000586934 EIF4G1Q04637 1599 aaKnown RBP36.87■■■■□ 3.49
SAFB-204ENST00000586934 CC2D2AQ9P2K1 1620 aa36.86■■■■□ 3.49
SAFB-204ENST00000586934 CECR2Q9BXF3 1484 aa36.69■■■■□ 3.46
SAFB-204ENST00000586934 SMARCA4P51532 1647 aa35.85■■■■□ 3.33
SAFB-204ENST00000586934 NCAPD3P42695 1498 aa35.85■■■■□ 3.33
SAFB-204ENST00000586934 ATAD2BQ9ULI0 1458 aa35.8■■■■□ 3.32
SAFB-204ENST00000586934 BAZ1AQ9NRL2 1556 aaPredicted RBP35.73■■■■□ 3.31
SAFB-204ENST00000586934 SMARCA2P51531 1590 aa35.7■■■■□ 3.31
SAFB-204ENST00000586934 HMGXB3Q12766 1538 aa35.6■■■■□ 3.29
SAFB-204ENST00000586934 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.28
SAFB-204ENST00000586934 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.27
SAFB-204ENST00000586934 BAZ1BQ9UIG0 1483 aaKnown RBP35.46■■■■□ 3.27
SAFB-204ENST00000586934 NESP48681 1621 aa35.16■■■■□ 3.22
SAFB-204ENST00000586934 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
SAFB-204ENST00000586934 WIZO95785 1651 aa35.11■■■■□ 3.21
SAFB-204ENST00000586934 CUX2O14529 1486 aa34.96■■■■□ 3.19
SAFB-204ENST00000586934 LAMC3Q9Y6N6 1575 aa34.96■■■■□ 3.19
SAFB-204ENST00000586934 RSF1Q96T23 1441 aaPredicted RBP34.94■■■■□ 3.18
SAFB-204ENST00000586934 CADPSQ9ULU8 1353 aa34.77■■■■□ 3.16
SAFB-204ENST00000586934 PDS5BQ9NTI5 1447 aa34.74■■■■□ 3.15
SAFB-204ENST00000586934 KIF21AQ7Z4S6 1674 aa34.7■■■■□ 3.15
SAFB-204ENST00000586934 THOC2Q8NI27 1593 aaKnown RBP34.7■■■■□ 3.14
SAFB-204ENST00000586934 TOP2AP11388 1531 aaKnown RBP34.68■■■■□ 3.14
SAFB-204ENST00000586934 DNAJC5Q9H3Z4 198 aa34.5■■■■□ 3.11
SAFB-204ENST00000586934 CFTRP13569 1480 aa34.47■■■■□ 3.11
SAFB-204ENST00000586934 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
SAFB-204ENST00000586934 FANCD2Q9BXW9 1451 aa34.37■■■■□ 3.09
SAFB-204ENST00000586934 CEP164Q9UPV0 1460 aa34.35■■■■□ 3.09
SAFB-204ENST00000586934 WDR62O43379 1518 aa34.33■■■■□ 3.09
SAFB-204ENST00000586934 CCDC88BA6NC98 1476 aa34.31■■■■□ 3.08
SAFB-204ENST00000586934 PRDM2Q13029 1718 aa34.14■■■■□ 3.06
SAFB-204ENST00000586934 URB2Q14146 1524 aaKnown RBP34.07■■■■□ 3.04
SAFB-204ENST00000586934 TOPBP1Q92547 1522 aa33.77■■■■□ 3
SAFB-204ENST00000586934 ABCC8Q09428 1581 aa33.72■■■□□ 2.99
SAFB-204ENST00000586934 SUPT5HO00267 1087 aaKnown RBP33.7■■■□□ 2.99
SAFB-204ENST00000586934 DNMBPQ6XZF7 1577 aa33.67■■■□□ 2.98
SAFB-204ENST00000586934 IFT140Q96RY7 1462 aa33.66■■■□□ 2.98
SAFB-204ENST00000586934 ZNF608Q9ULD9 1512 aaPredicted RBP33.58■■■□□ 2.97
SAFB-204ENST00000586934 OSCARQ8IYS5 282 aa33.46■■■□□ 2.95
SAFB-204ENST00000586934 POLA1P09884 1462 aaPredicted RBP33.45■■■□□ 2.95
SAFB-204ENST00000586934 TARBP1Q13395 1621 aaKnown RBP33.45■■■□□ 2.95
SAFB-204ENST00000586934 EIF4G3O43432 1585 aaKnown RBP33.4■■■□□ 2.94
SAFB-204ENST00000586934 CUX1P39880 1505 aa33.34■■■□□ 2.93
SAFB-204ENST00000586934 AQRO60306 1485 aaKnown RBP eCLIP33.34■■■□□ 2.931e-9■■■■□ 25.2
SAFB-204ENST00000586934 RAD54L2Q9Y4B4 1467 aa33.33■■■□□ 2.93
SAFB-204ENST00000586934 SOGA1O94964 1423 aa33.31■■■□□ 2.92
SAFB-204ENST00000586934 FGD5Q6ZNL6 1462 aa33.3■■■□□ 2.92
SAFB-204ENST00000586934 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
SAFB-204ENST00000586934 TRIM41Q8WV44 630 aa33.15■■■□□ 2.9
SAFB-204ENST00000586934 WDR97A6NE52 1622 aa33.11■■■□□ 2.89
SAFB-204ENST00000586934 CHD1O14646 1710 aa33.08■■■□□ 2.89
SAFB-204ENST00000586934 FBLN2P98095 1184 aa33.03■■■□□ 2.88
SAFB-204ENST00000586934 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
SAFB-204ENST00000586934 RIMBP3CA6NJZ7 1639 aa32.96■■■□□ 2.87
SAFB-204ENST00000586934 RIMBP3BA6NNM3 1639 aa32.96■■■□□ 2.87
SAFB-204ENST00000586934 RIMBP3Q9UFD9 1639 aa32.96■■■□□ 2.87
SAFB-204ENST00000586934 GRIN2BQ13224 1484 aa32.96■■■□□ 2.87
SAFB-204ENST00000586934 ABCA10Q8WWZ4 1543 aa32.95■■■□□ 2.87
SAFB-204ENST00000586934 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
SAFB-204ENST00000586934 MAGI1Q96QZ7 1491 aaPredicted RBP32.92■■■□□ 2.86
SAFB-204ENST00000586934 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
SAFB-204ENST00000586934 GAPVD1Q14C86 1478 aa32.91■■■□□ 2.86
SAFB-204ENST00000586934 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
SAFB-204ENST00000586934 ARHGEF11O15085 1522 aa32.9■■■□□ 2.86
SAFB-204ENST00000586934 SYNJ1O43426 1573 aa32.9■■■□□ 2.86
SAFB-204ENST00000586934 PBRM1Q86U86 1689 aa32.86■■■□□ 2.85
SAFB-204ENST00000586934 CHMP7Q8WUX9 453 aaPredicted RBP32.86■■■□□ 2.85
SAFB-204ENST00000586934 ABCA5Q8WWZ7 1642 aa32.86■■■□□ 2.85
SAFB-204ENST00000586934 SYNJ2O15056 1496 aa32.81■■■□□ 2.84
SAFB-204ENST00000586934 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
SAFB-204ENST00000586934 CYB5RLQ6IPT4 315 aa32.66■■■□□ 2.82
SAFB-204ENST00000586934 ARAP1Q96P48 1450 aa32.61■■■□□ 2.81
SAFB-204ENST00000586934 ADAMTS12P58397 1594 aa32.57■■■□□ 2.8
SAFB-204ENST00000586934 GRIN2AQ12879 1464 aa32.54■■■□□ 2.8
SAFB-204ENST00000586934 ERICH3Q5RHP9 1530 aa32.54■■■□□ 2.8
SAFB-204ENST00000586934 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.79
SAFB-204ENST00000586934 NUP160Q12769 1436 aa32.43■■■□□ 2.78
SAFB-204ENST00000586934 CEP170Q5SW79 1584 aa32.41■■■□□ 2.78
SAFB-204ENST00000586934 KIF27Q86VH2 1401 aa32.28■■■□□ 2.76
SAFB-204ENST00000586934 ERCC6L2Q5T890 1561 aa32.25■■■□□ 2.75
SAFB-204ENST00000586934 IGF1RP08069 1367 aa32.25■■■□□ 2.75
SAFB-204ENST00000586934 SHROOM2Q13796 1616 aa32.23■■■□□ 2.75
SAFB-204ENST00000586934 TRHP20396 242 aaPredicted RBP32.14■■■□□ 2.74
SAFB-204ENST00000586934 CUL7Q14999 1698 aa32.14■■■□□ 2.74
SAFB-204ENST00000586934 JPH4Q96JJ6 628 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms