RNA–Protein interactions for RNA: ENST00000586859.1

SRP68-205, Transcript of signal recognition particle 68, humanhuman

TSL 3

Gene SRP68, Length 703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-205ENST00000586859 NISCHQ9Y2I1 1504 aa34.89■■■■□ 3.18
SRP68-205ENST00000586859 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
SRP68-205ENST00000586859 ABCC9O60706 1549 aa30.61■■■□□ 2.49
SRP68-205ENST00000586859 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
SRP68-205ENST00000586859 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
SRP68-205ENST00000586859 NACADO15069 1562 aa29.22■■■□□ 2.27
SRP68-205ENST00000586859 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
SRP68-205ENST00000586859 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
SRP68-205ENST00000586859 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
SRP68-205ENST00000586859 UNC13AQ9UPW8 1703 aa28.67■■■□□ 2.18
SRP68-205ENST00000586859 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.17
SRP68-205ENST00000586859 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
SRP68-205ENST00000586859 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
SRP68-205ENST00000586859 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
SRP68-205ENST00000586859 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
SRP68-205ENST00000586859 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
SRP68-205ENST00000586859 CC2D2AQ9P2K1 1620 aa27.65■■■□□ 2.02
SRP68-205ENST00000586859 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
SRP68-205ENST00000586859 SMARCA4P51532 1647 aa27.11■■□□□ 1.93
SRP68-205ENST00000586859 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
SRP68-205ENST00000586859 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
SRP68-205ENST00000586859 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
SRP68-205ENST00000586859 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
SRP68-205ENST00000586859 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
SRP68-205ENST00000586859 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
SRP68-205ENST00000586859 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
SRP68-205ENST00000586859 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
SRP68-205ENST00000586859 WIZO95785 1651 aa26.63■■□□□ 1.85
SRP68-205ENST00000586859 RSF1Q96T23 1441 aaPredicted RBP26.55■■□□□ 1.84
SRP68-205ENST00000586859 NESP48681 1621 aa26.45■■□□□ 1.82
SRP68-205ENST00000586859 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
SRP68-205ENST00000586859 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
SRP68-205ENST00000586859 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
SRP68-205ENST00000586859 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.79
SRP68-205ENST00000586859 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
SRP68-205ENST00000586859 KIF21AQ7Z4S6 1674 aa26.11■■□□□ 1.77
SRP68-205ENST00000586859 CUX2O14529 1486 aa26.09■■□□□ 1.77
SRP68-205ENST00000586859 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
SRP68-205ENST00000586859 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
SRP68-205ENST00000586859 CFTRP13569 1480 aa26.01■■□□□ 1.75
SRP68-205ENST00000586859 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
SRP68-205ENST00000586859 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.73
SRP68-205ENST00000586859 MRC2Q9UBG0 1479 aa25.88■■□□□ 1.73
SRP68-205ENST00000586859 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
SRP68-205ENST00000586859 WDR62O43379 1518 aa25.79■■□□□ 1.72
SRP68-205ENST00000586859 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
SRP68-205ENST00000586859 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
SRP68-205ENST00000586859 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
SRP68-205ENST00000586859 DNAJC5Q9H3Z4 198 aa25.49■■□□□ 1.67
SRP68-205ENST00000586859 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
SRP68-205ENST00000586859 ABCC8Q09428 1581 aa25.42■■□□□ 1.66
SRP68-205ENST00000586859 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
SRP68-205ENST00000586859 ZNF608Q9ULD9 1512 aaPredicted RBP25.29■■□□□ 1.64
SRP68-205ENST00000586859 POLA1P09884 1462 aaPredicted RBP25.27■■□□□ 1.64
SRP68-205ENST00000586859 CUX1P39880 1505 aa25.26■■□□□ 1.63
SRP68-205ENST00000586859 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
SRP68-205ENST00000586859 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
SRP68-205ENST00000586859 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
SRP68-205ENST00000586859 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
SRP68-205ENST00000586859 SOGA1O94964 1423 aa25.16■■□□□ 1.62
SRP68-205ENST00000586859 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.614e-7■■■■■ 40.2
SRP68-205ENST00000586859 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
SRP68-205ENST00000586859 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
SRP68-205ENST00000586859 OSCARQ8IYS5 282 aa25.01■■□□□ 1.59
SRP68-205ENST00000586859 SYNJ1O43426 1573 aa25■■□□□ 1.59
SRP68-205ENST00000586859 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
SRP68-205ENST00000586859 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
SRP68-205ENST00000586859 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
SRP68-205ENST00000586859 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
SRP68-205ENST00000586859 FBLN2P98095 1184 aa24.89■■□□□ 1.58
SRP68-205ENST00000586859 CHD1O14646 1710 aa24.88■■□□□ 1.57
SRP68-205ENST00000586859 SNAPC4Q5SXM2 1469 aa24.88■■□□□ 1.57
SRP68-205ENST00000586859 GRIN2BQ13224 1484 aa24.87■■□□□ 1.57
SRP68-205ENST00000586859 GAPVD1Q14C86 1478 aa24.86■■□□□ 1.57
SRP68-205ENST00000586859 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
SRP68-205ENST00000586859 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
SRP68-205ENST00000586859 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
SRP68-205ENST00000586859 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
SRP68-205ENST00000586859 SYNJ2O15056 1496 aa24.71■■□□□ 1.55
SRP68-205ENST00000586859 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
SRP68-205ENST00000586859 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
SRP68-205ENST00000586859 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
SRP68-205ENST00000586859 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
SRP68-205ENST00000586859 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
SRP68-205ENST00000586859 ADAMTS12P58397 1594 aa24.61■■□□□ 1.53
SRP68-205ENST00000586859 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
SRP68-205ENST00000586859 CLASP1Q7Z460 1538 aa24.58■■□□□ 1.53
SRP68-205ENST00000586859 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
SRP68-205ENST00000586859 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
SRP68-205ENST00000586859 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
SRP68-205ENST00000586859 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
SRP68-205ENST00000586859 NUP160Q12769 1436 aa24.44■■□□□ 1.5
SRP68-205ENST00000586859 CYB5RLQ6IPT4 315 aa24.44■■□□□ 1.5
SRP68-205ENST00000586859 IGF1RP08069 1367 aa24.43■■□□□ 1.5
SRP68-205ENST00000586859 ARAP1Q96P48 1450 aa24.42■■□□□ 1.5
SRP68-205ENST00000586859 CUL7Q14999 1698 aa24.34■■□□□ 1.49
SRP68-205ENST00000586859 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
SRP68-205ENST00000586859 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
SRP68-205ENST00000586859 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
SRP68-205ENST00000586859 SHROOM2Q13796 1616 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms