RNA–Protein interactions for RNA: ENST00000586837.1

CXXC1-207, Transcript of CXXC finger protein 1, humanhuman

TSL 5

Gene CXXC1, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-207ENST00000586837 NISCHQ9Y2I1 1504 aa48.33■■■■■ 5.33
CXXC1-207ENST00000586837 ABCC9O60706 1549 aa43.52■■■■■ 4.56
CXXC1-207ENST00000586837 CCDC180Q9P1Z9 1646 aa43.33■■■■■ 4.53
CXXC1-207ENST00000586837 RB1CC1Q8TDY2 1594 aa41.27■■■■■ 4.2
CXXC1-207ENST00000586837 NACADO15069 1562 aa40.96■■■■■ 4.15
CXXC1-207ENST00000586837 DNAJC5BQ9UF47 199 aa40.93■■■■■ 4.14
CXXC1-207ENST00000586837 DCAF8L2P0C7V8 631 aa40.87■■■■■ 4.13
CXXC1-207ENST00000586837 PABPN1Q86U42 306 aaKnown RBP eCLIP40.53■■■■■ 4.08
CXXC1-207ENST00000586837 UNC13AQ9UPW8 1703 aa40.47■■■■■ 4.07
CXXC1-207ENST00000586837 MYO15BQ96JP2 1530 aa40.33■■■■■ 4.05
CXXC1-207ENST00000586837 BICRAQ9NZM4 1560 aa40.19■■■■■ 4.02
CXXC1-207ENST00000586837 ZCCHC6Q5VYS8 1495 aaKnown RBP40.06■■■■■ 4
CXXC1-207ENST00000586837 DCAF1Q9Y4B6 1507 aa39.83■■■■□ 3.97
CXXC1-207ENST00000586837 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
CXXC1-207ENST00000586837 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
CXXC1-207ENST00000586837 CC2D2AQ9P2K1 1620 aa39.27■■■■□ 3.88
CXXC1-207ENST00000586837 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
CXXC1-207ENST00000586837 CECR2Q9BXF3 1484 aa39.14■■■■□ 3.86
CXXC1-207ENST00000586837 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
CXXC1-207ENST00000586837 ATAD2BQ9ULI0 1458 aa37.77■■■■□ 3.64
CXXC1-207ENST00000586837 SMARCA4P51532 1647 aa37.73■■■■□ 3.63
CXXC1-207ENST00000586837 SMARCA2P51531 1590 aa37.59■■■■□ 3.61
CXXC1-207ENST00000586837 HMGXB3Q12766 1538 aa37.56■■■■□ 3.6
CXXC1-207ENST00000586837 ERCC6Q03468 1493 aa37.49■■■■□ 3.59
CXXC1-207ENST00000586837 BAZ1AQ9NRL2 1556 aaPredicted RBP37.48■■■■□ 3.59
CXXC1-207ENST00000586837 DNAJC5Q9H3Z4 198 aa37.46■■■■□ 3.59
CXXC1-207ENST00000586837 NESP48681 1621 aa37.41■■■■□ 3.58
CXXC1-207ENST00000586837 CUX2O14529 1486 aa37.39■■■■□ 3.58
CXXC1-207ENST00000586837 BAZ1BQ9UIG0 1483 aaKnown RBP37.39■■■■□ 3.58
CXXC1-207ENST00000586837 MROH2BQ7Z745 1585 aa37.32■■■■□ 3.56
CXXC1-207ENST00000586837 PEG3Q9GZU2 1588 aa37.3■■■■□ 3.56
CXXC1-207ENST00000586837 LAMC3Q9Y6N6 1575 aa36.99■■■■□ 3.51
CXXC1-207ENST00000586837 THOC2Q8NI27 1593 aaKnown RBP36.98■■■■□ 3.51
CXXC1-207ENST00000586837 WIZO95785 1651 aa36.88■■■■□ 3.49
CXXC1-207ENST00000586837 KIF21AQ7Z4S6 1674 aa36.88■■■■□ 3.49
CXXC1-207ENST00000586837 PDS5BQ9NTI5 1447 aa36.75■■■■□ 3.47
CXXC1-207ENST00000586837 CADPSQ9ULU8 1353 aa36.7■■■■□ 3.47
CXXC1-207ENST00000586837 RSF1Q96T23 1441 aaPredicted RBP36.5■■■■□ 3.43
CXXC1-207ENST00000586837 MRC2Q9UBG0 1479 aa36.5■■■■□ 3.43
CXXC1-207ENST00000586837 WDR62O43379 1518 aa36.42■■■■□ 3.42
CXXC1-207ENST00000586837 CEP164Q9UPV0 1460 aa36.34■■■■□ 3.41
CXXC1-207ENST00000586837 TOP2AP11388 1531 aaKnown RBP36.33■■■■□ 3.41
CXXC1-207ENST00000586837 FANCD2Q9BXW9 1451 aa36.32■■■■□ 3.41
CXXC1-207ENST00000586837 CFTRP13569 1480 aa36.29■■■■□ 3.4
CXXC1-207ENST00000586837 URB2Q14146 1524 aaKnown RBP36.08■■■■□ 3.37
CXXC1-207ENST00000586837 CCDC88BA6NC98 1476 aa35.96■■■■□ 3.35
CXXC1-207ENST00000586837 PRDM2Q13029 1718 aa35.9■■■■□ 3.34
CXXC1-207ENST00000586837 TRIM41Q8WV44 630 aa35.89■■■■□ 3.34
CXXC1-207ENST00000586837 OSCARQ8IYS5 282 aa35.68■■■■□ 3.3
CXXC1-207ENST00000586837 ZNF608Q9ULD9 1512 aaPredicted RBP35.67■■■■□ 3.3
CXXC1-207ENST00000586837 TOPBP1Q92547 1522 aa35.64■■■■□ 3.3
CXXC1-207ENST00000586837 IFT140Q96RY7 1462 aa35.59■■■■□ 3.29
CXXC1-207ENST00000586837 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
CXXC1-207ENST00000586837 EIF4G3O43432 1585 aaKnown RBP35.42■■■■□ 3.26
CXXC1-207ENST00000586837 ABCC8Q09428 1581 aa35.42■■■■□ 3.26
CXXC1-207ENST00000586837 TARBP1Q13395 1621 aaKnown RBP35.34■■■■□ 3.25
CXXC1-207ENST00000586837 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.25
CXXC1-207ENST00000586837 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.25
CXXC1-207ENST00000586837 RIMBP3Q9UFD9 1639 aa35.32■■■■□ 3.25
CXXC1-207ENST00000586837 AQRO60306 1485 aaKnown RBP eCLIP35.31■■■■□ 3.245e-7■■■■□ 21.9
CXXC1-207ENST00000586837 POLA1P09884 1462 aaPredicted RBP35.28■■■■□ 3.24
CXXC1-207ENST00000586837 RAD54L2Q9Y4B4 1467 aa35.22■■■■□ 3.23
CXXC1-207ENST00000586837 ARHGEF11O15085 1522 aa35.19■■■■□ 3.22
CXXC1-207ENST00000586837 CHD1O14646 1710 aa35.18■■■■□ 3.22
CXXC1-207ENST00000586837 SOGA1O94964 1423 aa35.09■■■■□ 3.21
CXXC1-207ENST00000586837 TDRD9Q8NDG6 1382 aaKnown RBP35.09■■■■□ 3.21
CXXC1-207ENST00000586837 FGD5Q6ZNL6 1462 aa35.07■■■■□ 3.2
CXXC1-207ENST00000586837 CUX1P39880 1505 aa35.06■■■■□ 3.2
CXXC1-207ENST00000586837 FBLN2P98095 1184 aa35.05■■■■□ 3.2
CXXC1-207ENST00000586837 SNAPC4Q5SXM2 1469 aa34.94■■■■□ 3.18
CXXC1-207ENST00000586837 CYB5RLQ6IPT4 315 aa34.93■■■■□ 3.18
CXXC1-207ENST00000586837 SUPT5HO00267 1087 aaKnown RBP34.89■■■■□ 3.18
CXXC1-207ENST00000586837 ARAP1Q96P48 1450 aa34.87■■■■□ 3.17
CXXC1-207ENST00000586837 WDR97A6NE52 1622 aa34.83■■■■□ 3.17
CXXC1-207ENST00000586837 GRIN2BQ13224 1484 aa34.77■■■■□ 3.16
CXXC1-207ENST00000586837 CLASP1Q7Z460 1538 aa34.76■■■■□ 3.15
CXXC1-207ENST00000586837 MAGI1Q96QZ7 1491 aaPredicted RBP34.75■■■■□ 3.15
CXXC1-207ENST00000586837 CHMP7Q8WUX9 453 aaPredicted RBP34.73■■■■□ 3.15
CXXC1-207ENST00000586837 PBRM1Q86U86 1689 aa34.69■■■■□ 3.14
CXXC1-207ENST00000586837 SYNJ2O15056 1496 aa34.66■■■■□ 3.14
CXXC1-207ENST00000586837 GAPVD1Q14C86 1478 aa34.66■■■■□ 3.14
CXXC1-207ENST00000586837 SYNJ1O43426 1573 aa34.66■■■■□ 3.14
CXXC1-207ENST00000586837 ABCA10Q8WWZ4 1543 aa34.61■■■■□ 3.13
CXXC1-207ENST00000586837 ABCA5Q8WWZ7 1642 aa34.6■■■■□ 3.13
CXXC1-207ENST00000586837 TRHP20396 242 aaPredicted RBP34.54■■■■□ 3.12
CXXC1-207ENST00000586837 WRNQ14191 1432 aaPredicted RBP eCLIP34.44■■■■□ 3.1
CXXC1-207ENST00000586837 BIVM-ERCC5R4GMW8 1640 aa34.43■■■■□ 3.1
CXXC1-207ENST00000586837 TOP2BQ02880 1626 aa34.42■■■■□ 3.1
CXXC1-207ENST00000586837 ADAMTS12P58397 1594 aa34.36■■■■□ 3.09
CXXC1-207ENST00000586837 GRIN2AQ12879 1464 aa34.35■■■■□ 3.09
CXXC1-207ENST00000586837 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.08
CXXC1-207ENST00000586837 CEP170Q5SW79 1584 aa34.29■■■■□ 3.08
CXXC1-207ENST00000586837 NUP160Q12769 1436 aa34.23■■■■□ 3.07
CXXC1-207ENST00000586837 FHAD1B1AJZ9 1412 aa34.2■■■■□ 3.06
CXXC1-207ENST00000586837 ERICH3Q5RHP9 1530 aa34.15■■■■□ 3.06
CXXC1-207ENST00000586837 SHROOM2Q13796 1616 aa34.09■■■■□ 3.05
CXXC1-207ENST00000586837 PRG4Q92954 1404 aaPredicted RBP33.92■■■■□ 3.02
CXXC1-207ENST00000586837 JPH4Q96JJ6 628 aa33.87■■■■□ 3.01
CXXC1-207ENST00000586837 RUSC2Q8N2Y8 1516 aa33.87■■■■□ 3.01
CXXC1-207ENST00000586837 IGF1RP08069 1367 aa33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms