RNA–Protein interactions for RNA: ENST00000586815.1

WIPI1-204, Transcript of WD repeat domain, phosphoinositide interacting 1, humanhuman

TSL 3

Gene WIPI1, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI1-204ENST00000586815 NISCHQ9Y2I1 1504 aa55.17■■■■■ 6.42
WIPI1-204ENST00000586815 CCDC180Q9P1Z9 1646 aa49.4■■■■■ 5.5
WIPI1-204ENST00000586815 ABCC9O60706 1549 aa48.83■■■■■ 5.41
WIPI1-204ENST00000586815 RB1CC1Q8TDY2 1594 aa46.83■■■■■ 5.09
WIPI1-204ENST00000586815 NACADO15069 1562 aa46.63■■■■■ 5.06
WIPI1-204ENST00000586815 DCAF8L2P0C7V8 631 aa46.39■■■■■ 5.02
WIPI1-204ENST00000586815 MYO15BQ96JP2 1530 aa46.18■■■■■ 4.98
WIPI1-204ENST00000586815 ZCCHC6Q5VYS8 1495 aaKnown RBP45.8■■■■■ 4.92
WIPI1-204ENST00000586815 DCAF1Q9Y4B6 1507 aa45.71■■■■■ 4.91
WIPI1-204ENST00000586815 UNC13AQ9UPW8 1703 aa45.59■■■■■ 4.89
WIPI1-204ENST00000586815 PABPN1Q86U42 306 aaKnown RBP eCLIP45.5■■■■■ 4.87
WIPI1-204ENST00000586815 DNAJC5BQ9UF47 199 aa45.28■■■■■ 4.84
WIPI1-204ENST00000586815 BICRAQ9NZM4 1560 aa45.25■■■■■ 4.83
WIPI1-204ENST00000586815 SHROOM4Q9ULL8 1493 aa44.99■■■■■ 4.79
WIPI1-204ENST00000586815 SCRIBQ14160 1630 aa44.9■■■■■ 4.78
WIPI1-204ENST00000586815 EIF4G1Q04637 1599 aaKnown RBP44.2■■■■■ 4.67
WIPI1-204ENST00000586815 CC2D2AQ9P2K1 1620 aa44.16■■■■■ 4.66
WIPI1-204ENST00000586815 CECR2Q9BXF3 1484 aa44.01■■■■■ 4.64
WIPI1-204ENST00000586815 NCAPD3P42695 1498 aa43■■■■■ 4.47
WIPI1-204ENST00000586815 SMARCA4P51532 1647 aa42.93■■■■■ 4.46
WIPI1-204ENST00000586815 SMARCA2P51531 1590 aa42.89■■■■■ 4.46
WIPI1-204ENST00000586815 ATAD2BQ9ULI0 1458 aa42.87■■■■■ 4.45
WIPI1-204ENST00000586815 BAZ1AQ9NRL2 1556 aaPredicted RBP42.87■■■■■ 4.45
WIPI1-204ENST00000586815 HMGXB3Q12766 1538 aa42.73■■■■■ 4.43
WIPI1-204ENST00000586815 PEG3Q9GZU2 1588 aa42.56■■■■■ 4.4
WIPI1-204ENST00000586815 BAZ1BQ9UIG0 1483 aaKnown RBP42.53■■■■■ 4.4
WIPI1-204ENST00000586815 MROH2BQ7Z745 1585 aa42.43■■■■■ 4.38
WIPI1-204ENST00000586815 ERCC6Q03468 1493 aa42.26■■■■■ 4.36
WIPI1-204ENST00000586815 CUX2O14529 1486 aa42.06■■■■■ 4.32
WIPI1-204ENST00000586815 NESP48681 1621 aa42■■■■■ 4.31
WIPI1-204ENST00000586815 LAMC3Q9Y6N6 1575 aa41.99■■■■■ 4.31
WIPI1-204ENST00000586815 WIZO95785 1651 aa41.93■■■■■ 4.3
WIPI1-204ENST00000586815 PDS5BQ9NTI5 1447 aa41.78■■■■■ 4.28
WIPI1-204ENST00000586815 RSF1Q96T23 1441 aaPredicted RBP41.76■■■■■ 4.28
WIPI1-204ENST00000586815 CADPSQ9ULU8 1353 aa41.71■■■■■ 4.27
WIPI1-204ENST00000586815 THOC2Q8NI27 1593 aaKnown RBP41.56■■■■■ 4.24
WIPI1-204ENST00000586815 TOP2AP11388 1531 aaKnown RBP41.54■■■■■ 4.24
WIPI1-204ENST00000586815 KIF21AQ7Z4S6 1674 aa41.53■■■■■ 4.24
WIPI1-204ENST00000586815 DNAJC5Q9H3Z4 198 aa41.47■■■■■ 4.23
WIPI1-204ENST00000586815 CFTRP13569 1480 aa41.31■■■■■ 4.2
WIPI1-204ENST00000586815 MRC2Q9UBG0 1479 aa41.3■■■■■ 4.2
WIPI1-204ENST00000586815 CEP164Q9UPV0 1460 aa41.25■■■■■ 4.19
WIPI1-204ENST00000586815 FANCD2Q9BXW9 1451 aa41.21■■■■■ 4.19
WIPI1-204ENST00000586815 WDR62O43379 1518 aa41.17■■■■■ 4.18
WIPI1-204ENST00000586815 CCDC88BA6NC98 1476 aa41.02■■■■■ 4.16
WIPI1-204ENST00000586815 PRDM2Q13029 1718 aa40.96■■■■■ 4.15
WIPI1-204ENST00000586815 URB2Q14146 1524 aaKnown RBP40.76■■■■■ 4.12
WIPI1-204ENST00000586815 ABCC8Q09428 1581 aa40.59■■■■■ 4.09
WIPI1-204ENST00000586815 TOPBP1Q92547 1522 aa40.45■■■■■ 4.07
WIPI1-204ENST00000586815 IFT140Q96RY7 1462 aa40.43■■■■■ 4.06
WIPI1-204ENST00000586815 DNMBPQ6XZF7 1577 aa40.39■■■■■ 4.06
WIPI1-204ENST00000586815 SUPT5HO00267 1087 aaKnown RBP40.24■■■■■ 4.03
WIPI1-204ENST00000586815 OSCARQ8IYS5 282 aa40.23■■■■■ 4.03
WIPI1-204ENST00000586815 ZNF608Q9ULD9 1512 aaPredicted RBP40.15■■■■■ 4.02
WIPI1-204ENST00000586815 POLA1P09884 1462 aaPredicted RBP40.06■■■■■ 4
WIPI1-204ENST00000586815 TARBP1Q13395 1621 aaKnown RBP40.02■■■■■ 4
WIPI1-204ENST00000586815 EIF4G3O43432 1585 aaKnown RBP40.01■■■■■ 4
WIPI1-204ENST00000586815 SOGA1O94964 1423 aa39.94■■■■□ 3.98
WIPI1-204ENST00000586815 AQRO60306 1485 aaKnown RBP eCLIP39.88■■■■□ 3.986e-6■■■■□ 23.2
WIPI1-204ENST00000586815 FGD5Q6ZNL6 1462 aa39.87■■■■□ 3.97
WIPI1-204ENST00000586815 CUX1P39880 1505 aa39.86■■■■□ 3.97
WIPI1-204ENST00000586815 WDR97A6NE52 1622 aa39.85■■■■□ 3.97
WIPI1-204ENST00000586815 RAD54L2Q9Y4B4 1467 aa39.83■■■■□ 3.97
WIPI1-204ENST00000586815 TRIM41Q8WV44 630 aa39.78■■■■□ 3.96
WIPI1-204ENST00000586815 TDRD9Q8NDG6 1382 aaKnown RBP39.72■■■■□ 3.95
WIPI1-204ENST00000586815 FBLN2P98095 1184 aa39.63■■■■□ 3.93
WIPI1-204ENST00000586815 CHD1O14646 1710 aa39.62■■■■□ 3.93
WIPI1-204ENST00000586815 GRIN2BQ13224 1484 aa39.57■■■■□ 3.93
WIPI1-204ENST00000586815 MAGI1Q96QZ7 1491 aaPredicted RBP39.56■■■■□ 3.92
WIPI1-204ENST00000586815 SNAPC4Q5SXM2 1469 aa39.52■■■■□ 3.92
WIPI1-204ENST00000586815 RIMBP3CA6NJZ7 1639 aa39.51■■■■□ 3.91
WIPI1-204ENST00000586815 RIMBP3BA6NNM3 1639 aa39.51■■■■□ 3.91
WIPI1-204ENST00000586815 RIMBP3Q9UFD9 1639 aa39.51■■■■□ 3.91
WIPI1-204ENST00000586815 ABCA10Q8WWZ4 1543 aa39.5■■■■□ 3.91
WIPI1-204ENST00000586815 WRNQ14191 1432 aaPredicted RBP eCLIP39.48■■■■□ 3.91
WIPI1-204ENST00000586815 CHMP7Q8WUX9 453 aaPredicted RBP39.47■■■■□ 3.91
WIPI1-204ENST00000586815 GAPVD1Q14C86 1478 aa39.47■■■■□ 3.91
WIPI1-204ENST00000586815 ARHGEF11O15085 1522 aa39.46■■■■□ 3.91
WIPI1-204ENST00000586815 TOP2BQ02880 1626 aa39.42■■■■□ 3.9
WIPI1-204ENST00000586815 BIVM-ERCC5R4GMW8 1640 aa39.4■■■■□ 3.9
WIPI1-204ENST00000586815 SYNJ2O15056 1496 aa39.37■■■■□ 3.89
WIPI1-204ENST00000586815 PBRM1Q86U86 1689 aa39.37■■■■□ 3.89
WIPI1-204ENST00000586815 ABCA5Q8WWZ7 1642 aa39.34■■■■□ 3.89
WIPI1-204ENST00000586815 SYNJ1O43426 1573 aa39.33■■■■□ 3.89
WIPI1-204ENST00000586815 CLASP1Q7Z460 1538 aa39.19■■■■□ 3.86
WIPI1-204ENST00000586815 CYB5RLQ6IPT4 315 aa39.17■■■■□ 3.86
WIPI1-204ENST00000586815 ARAP1Q96P48 1450 aa39.05■■■■□ 3.84
WIPI1-204ENST00000586815 ERICH3Q5RHP9 1530 aa39.04■■■■□ 3.84
WIPI1-204ENST00000586815 GRIN2AQ12879 1464 aa39.02■■■■□ 3.84
WIPI1-204ENST00000586815 ADAMTS12P58397 1594 aa39.02■■■■□ 3.84
WIPI1-204ENST00000586815 FHAD1B1AJZ9 1412 aa39.01■■■■□ 3.84
WIPI1-204ENST00000586815 NUP160Q12769 1436 aa38.87■■■■□ 3.81
WIPI1-204ENST00000586815 CEP170Q5SW79 1584 aa38.77■■■■□ 3.8
WIPI1-204ENST00000586815 KIF27Q86VH2 1401 aa38.75■■■■□ 3.79
WIPI1-204ENST00000586815 TRHP20396 242 aaPredicted RBP38.65■■■■□ 3.78
WIPI1-204ENST00000586815 SHROOM2Q13796 1616 aa38.63■■■■□ 3.77
WIPI1-204ENST00000586815 CUL7Q14999 1698 aa38.58■■■■□ 3.77
WIPI1-204ENST00000586815 IGF1RP08069 1367 aa38.57■■■■□ 3.77
WIPI1-204ENST00000586815 JPH4Q96JJ6 628 aa38.51■■■■□ 3.76
WIPI1-204ENST00000586815 ERCC6L2Q5T890 1561 aa38.48■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms