RNA–Protein interactions for RNA: ENST00000586810.5

TUBB6-205, Transcript of tubulin beta 6 class V, humanhuman

TSL 1 (best)

Gene TUBB6, Length 1,493 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-205ENST00000586810 NISCHQ9Y2I1 1504 aa45.31■■■■■ 4.84
TUBB6-205ENST00000586810 CCDC180Q9P1Z9 1646 aa40.37■■■■■ 4.05
TUBB6-205ENST00000586810 ABCC9O60706 1549 aa39.76■■■■□ 3.95
TUBB6-205ENST00000586810 RB1CC1Q8TDY2 1594 aa38.09■■■■□ 3.69
TUBB6-205ENST00000586810 DCAF8L2P0C7V8 631 aa38.03■■■■□ 3.68
TUBB6-205ENST00000586810 NACADO15069 1562 aa37.97■■■■□ 3.67
TUBB6-205ENST00000586810 ZCCHC6Q5VYS8 1495 aaKnown RBP37.71■■■■□ 3.63
TUBB6-205ENST00000586810 MYO15BQ96JP2 1530 aa37.61■■■■□ 3.61
TUBB6-205ENST00000586810 DCAF1Q9Y4B6 1507 aa37.41■■■■□ 3.58
TUBB6-205ENST00000586810 UNC13AQ9UPW8 1703 aa37.29■■■■□ 3.56
TUBB6-205ENST00000586810 PABPN1Q86U42 306 aaKnown RBP eCLIP37.12■■■■□ 3.53
TUBB6-205ENST00000586810 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
TUBB6-205ENST00000586810 SCRIBQ14160 1630 aa36.93■■■■□ 3.5
TUBB6-205ENST00000586810 DNAJC5BQ9UF47 199 aa36.61■■■■□ 3.45
TUBB6-205ENST00000586810 SHROOM4Q9ULL8 1493 aa36.46■■■■□ 3.43
TUBB6-205ENST00000586810 EIF4G1Q04637 1599 aaKnown RBP36.01■■■■□ 3.36
TUBB6-205ENST00000586810 CC2D2AQ9P2K1 1620 aa35.93■■■■□ 3.34
TUBB6-205ENST00000586810 CECR2Q9BXF3 1484 aa35.7■■■■□ 3.31
TUBB6-205ENST00000586810 SMARCA4P51532 1647 aa35.23■■■■□ 3.23
TUBB6-205ENST00000586810 BAZ1AQ9NRL2 1556 aaPredicted RBP35.13■■■■□ 3.22
TUBB6-205ENST00000586810 ATAD2BQ9ULI0 1458 aa35.05■■■■□ 3.2
TUBB6-205ENST00000586810 NCAPD3P42695 1498 aa35.01■■■■□ 3.2
TUBB6-205ENST00000586810 SMARCA2P51531 1590 aa34.99■■■■□ 3.19
TUBB6-205ENST00000586810 MROH2BQ7Z745 1585 aa34.96■■■■□ 3.19
TUBB6-205ENST00000586810 HMGXB3Q12766 1538 aa34.86■■■■□ 3.17
TUBB6-205ENST00000586810 PEG3Q9GZU2 1588 aa34.82■■■■□ 3.16
TUBB6-205ENST00000586810 BAZ1BQ9UIG0 1483 aaKnown RBP34.79■■■■□ 3.16
TUBB6-205ENST00000586810 WIZO95785 1651 aa34.61■■■■□ 3.13
TUBB6-205ENST00000586810 RSF1Q96T23 1441 aaPredicted RBP34.45■■■■□ 3.11
TUBB6-205ENST00000586810 NESP48681 1621 aa34.35■■■■□ 3.09
TUBB6-205ENST00000586810 ERCC6Q03468 1493 aa34.28■■■■□ 3.08
TUBB6-205ENST00000586810 TOP2AP11388 1531 aaKnown RBP34.18■■■■□ 3.06
TUBB6-205ENST00000586810 LAMC3Q9Y6N6 1575 aa34.16■■■■□ 3.06
TUBB6-205ENST00000586810 CADPSQ9ULU8 1353 aa34.01■■■■□ 3.03
TUBB6-205ENST00000586810 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
TUBB6-205ENST00000586810 PDS5BQ9NTI5 1447 aa33.93■■■■□ 3.02
TUBB6-205ENST00000586810 CUX2O14529 1486 aa33.9■■■■□ 3.02
TUBB6-205ENST00000586810 THOC2Q8NI27 1593 aaKnown RBP33.85■■■■□ 3.01
TUBB6-205ENST00000586810 CCDC88BA6NC98 1476 aa33.77■■■■□ 3
TUBB6-205ENST00000586810 CFTRP13569 1480 aa33.77■■■■□ 3
TUBB6-205ENST00000586810 FANCD2Q9BXW9 1451 aa33.67■■■□□ 2.98
TUBB6-205ENST00000586810 CEP164Q9UPV0 1460 aa33.65■■■□□ 2.98
TUBB6-205ENST00000586810 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
TUBB6-205ENST00000586810 PRDM2Q13029 1718 aa33.57■■■□□ 2.96
TUBB6-205ENST00000586810 SUPT5HO00267 1087 aaKnown RBP33.53■■■□□ 2.96
TUBB6-205ENST00000586810 WDR62O43379 1518 aa33.52■■■□□ 2.96
TUBB6-205ENST00000586810 URB2Q14146 1524 aaKnown RBP33.35■■■□□ 2.93
TUBB6-205ENST00000586810 TOPBP1Q92547 1522 aa33.11■■■□□ 2.89
TUBB6-205ENST00000586810 DNMBPQ6XZF7 1577 aa33.06■■■□□ 2.88
TUBB6-205ENST00000586810 DNAJC5Q9H3Z4 198 aa33.05■■■□□ 2.88
TUBB6-205ENST00000586810 ABCC8Q09428 1581 aa33.02■■■□□ 2.88
TUBB6-205ENST00000586810 IFT140Q96RY7 1462 aa32.92■■■□□ 2.86
TUBB6-205ENST00000586810 ZNF608Q9ULD9 1512 aaPredicted RBP32.85■■■□□ 2.85
TUBB6-205ENST00000586810 POLA1P09884 1462 aaPredicted RBP32.82■■■□□ 2.84
TUBB6-205ENST00000586810 CUX1P39880 1505 aa32.81■■■□□ 2.84
TUBB6-205ENST00000586810 TARBP1Q13395 1621 aaKnown RBP32.76■■■□□ 2.83
TUBB6-205ENST00000586810 FGD5Q6ZNL6 1462 aa32.73■■■□□ 2.83
TUBB6-205ENST00000586810 EIF4G3O43432 1585 aaKnown RBP32.73■■■□□ 2.83
TUBB6-205ENST00000586810 RAD54L2Q9Y4B4 1467 aa32.71■■■□□ 2.83
TUBB6-205ENST00000586810 SOGA1O94964 1423 aa32.66■■■□□ 2.82
TUBB6-205ENST00000586810 AQRO60306 1485 aaKnown RBP eCLIP32.62■■■□□ 2.812e-6■■■□□ 15.6
TUBB6-205ENST00000586810 TDRD9Q8NDG6 1382 aaKnown RBP32.53■■■□□ 2.8
TUBB6-205ENST00000586810 WRNQ14191 1432 aaPredicted RBP eCLIP32.51■■■□□ 2.79
TUBB6-205ENST00000586810 SYNJ1O43426 1573 aa32.49■■■□□ 2.79
TUBB6-205ENST00000586810 WDR97A6NE52 1622 aa32.47■■■□□ 2.79
TUBB6-205ENST00000586810 BIVM-ERCC5R4GMW8 1640 aa32.46■■■□□ 2.79
TUBB6-205ENST00000586810 OSCARQ8IYS5 282 aa32.46■■■□□ 2.79
TUBB6-205ENST00000586810 TOP2BQ02880 1626 aa32.45■■■□□ 2.79
TUBB6-205ENST00000586810 CHD1O14646 1710 aa32.37■■■□□ 2.77
TUBB6-205ENST00000586810 ABCA10Q8WWZ4 1543 aa32.36■■■□□ 2.77
TUBB6-205ENST00000586810 SNAPC4Q5SXM2 1469 aa32.34■■■□□ 2.77
TUBB6-205ENST00000586810 FBLN2P98095 1184 aa32.3■■■□□ 2.76
TUBB6-205ENST00000586810 GRIN2BQ13224 1484 aa32.3■■■□□ 2.76
TUBB6-205ENST00000586810 PBRM1Q86U86 1689 aa32.3■■■□□ 2.76
TUBB6-205ENST00000586810 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
TUBB6-205ENST00000586810 ABCA5Q8WWZ7 1642 aa32.29■■■□□ 2.76
TUBB6-205ENST00000586810 MAGI1Q96QZ7 1491 aaPredicted RBP32.23■■■□□ 2.75
TUBB6-205ENST00000586810 CHMP7Q8WUX9 453 aaPredicted RBP32.13■■■□□ 2.73
TUBB6-205ENST00000586810 SYNJ2O15056 1496 aa32.11■■■□□ 2.73
TUBB6-205ENST00000586810 RIMBP3CA6NJZ7 1639 aa32.05■■■□□ 2.72
TUBB6-205ENST00000586810 RIMBP3BA6NNM3 1639 aa32.05■■■□□ 2.72
TUBB6-205ENST00000586810 RIMBP3Q9UFD9 1639 aa32.05■■■□□ 2.72
TUBB6-205ENST00000586810 TRIM41Q8WV44 630 aa32.03■■■□□ 2.72
TUBB6-205ENST00000586810 ADAMTS12P58397 1594 aa32.01■■■□□ 2.71
TUBB6-205ENST00000586810 ARHGEF11O15085 1522 aa31.99■■■□□ 2.71
TUBB6-205ENST00000586810 ERICH3Q5RHP9 1530 aa31.97■■■□□ 2.71
TUBB6-205ENST00000586810 CLASP1Q7Z460 1538 aa31.94■■■□□ 2.7
TUBB6-205ENST00000586810 GRIN2AQ12879 1464 aa31.9■■■□□ 2.7
TUBB6-205ENST00000586810 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
TUBB6-205ENST00000586810 KIF27Q86VH2 1401 aa31.83■■■□□ 2.69
TUBB6-205ENST00000586810 CEP170Q5SW79 1584 aa31.78■■■□□ 2.68
TUBB6-205ENST00000586810 NUP160Q12769 1436 aa31.73■■■□□ 2.67
TUBB6-205ENST00000586810 ARAP1Q96P48 1450 aa31.73■■■□□ 2.67
TUBB6-205ENST00000586810 CYB5RLQ6IPT4 315 aa31.71■■■□□ 2.67
TUBB6-205ENST00000586810 IGF1RP08069 1367 aa31.69■■■□□ 2.66
TUBB6-205ENST00000586810 CUL7Q14999 1698 aa31.68■■■□□ 2.66
TUBB6-205ENST00000586810 ERCC6L2Q5T890 1561 aa31.55■■■□□ 2.64
TUBB6-205ENST00000586810 RUSC2Q8N2Y8 1516 aa31.55■■■□□ 2.64
TUBB6-205ENST00000586810 SHROOM2Q13796 1616 aa31.54■■■□□ 2.64
TUBB6-205ENST00000586810 CARMIL1Q5VZK9 1371 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms