RNA–Protein interactions for RNA: ENST00000586801.1

CNTNAP1-203, Transcript of contactin associated protein 1, humanhuman

TSL 3

Gene CNTNAP1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-203ENST00000586801 NISCHQ9Y2I1 1504 aa34.07■■■■□ 3.04
CNTNAP1-203ENST00000586801 CCDC180Q9P1Z9 1646 aa30.71■■■□□ 2.51
CNTNAP1-203ENST00000586801 ABCC9O60706 1549 aa30.47■■■□□ 2.47
CNTNAP1-203ENST00000586801 RB1CC1Q8TDY2 1594 aa29.14■■■□□ 2.26
CNTNAP1-203ENST00000586801 NACADO15069 1562 aa28.92■■■□□ 2.22
CNTNAP1-203ENST00000586801 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
CNTNAP1-203ENST00000586801 UNC13AQ9UPW8 1703 aa28.56■■■□□ 2.16
CNTNAP1-203ENST00000586801 MYO15BQ96JP2 1530 aa28.49■■■□□ 2.15
CNTNAP1-203ENST00000586801 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
CNTNAP1-203ENST00000586801 PABPN1Q86U42 306 aaKnown RBP eCLIP28.29■■■□□ 2.12
CNTNAP1-203ENST00000586801 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
CNTNAP1-203ENST00000586801 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
CNTNAP1-203ENST00000586801 DCAF1Q9Y4B6 1507 aa28.16■■■□□ 2.1
CNTNAP1-203ENST00000586801 SCRIBQ14160 1630 aa27.93■■■□□ 2.06
CNTNAP1-203ENST00000586801 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
CNTNAP1-203ENST00000586801 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
CNTNAP1-203ENST00000586801 EIF4G1Q04637 1599 aaKnown RBP27.54■■■□□ 2
CNTNAP1-203ENST00000586801 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
CNTNAP1-203ENST00000586801 SMARCA4P51532 1647 aa26.64■■□□□ 1.85
CNTNAP1-203ENST00000586801 NCAPD3P42695 1498 aa26.59■■□□□ 1.85
CNTNAP1-203ENST00000586801 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
CNTNAP1-203ENST00000586801 ATAD2BQ9ULI0 1458 aa26.54■■□□□ 1.84
CNTNAP1-203ENST00000586801 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
CNTNAP1-203ENST00000586801 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
CNTNAP1-203ENST00000586801 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
CNTNAP1-203ENST00000586801 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
CNTNAP1-203ENST00000586801 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.81
CNTNAP1-203ENST00000586801 CUX2O14529 1486 aa26.28■■□□□ 1.8
CNTNAP1-203ENST00000586801 MROH2BQ7Z745 1585 aa26.23■■□□□ 1.79
CNTNAP1-203ENST00000586801 NESP48681 1621 aa26.17■■□□□ 1.78
CNTNAP1-203ENST00000586801 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
CNTNAP1-203ENST00000586801 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
CNTNAP1-203ENST00000586801 WIZO95785 1651 aa26.01■■□□□ 1.75
CNTNAP1-203ENST00000586801 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
CNTNAP1-203ENST00000586801 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
CNTNAP1-203ENST00000586801 PDS5BQ9NTI5 1447 aa25.89■■□□□ 1.74
CNTNAP1-203ENST00000586801 CADPSQ9ULU8 1353 aa25.79■■□□□ 1.72
CNTNAP1-203ENST00000586801 MRC2Q9UBG0 1479 aa25.69■■□□□ 1.7
CNTNAP1-203ENST00000586801 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
CNTNAP1-203ENST00000586801 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
CNTNAP1-203ENST00000586801 WDR62O43379 1518 aa25.63■■□□□ 1.69
CNTNAP1-203ENST00000586801 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
CNTNAP1-203ENST00000586801 PRDM2Q13029 1718 aa25.56■■□□□ 1.68
CNTNAP1-203ENST00000586801 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
CNTNAP1-203ENST00000586801 CFTRP13569 1480 aa25.53■■□□□ 1.68
CNTNAP1-203ENST00000586801 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
CNTNAP1-203ENST00000586801 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
CNTNAP1-203ENST00000586801 TOPBP1Q92547 1522 aa25.08■■□□□ 1.61
CNTNAP1-203ENST00000586801 IFT140Q96RY7 1462 aa25.08■■□□□ 1.6
CNTNAP1-203ENST00000586801 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
CNTNAP1-203ENST00000586801 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
CNTNAP1-203ENST00000586801 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
CNTNAP1-203ENST00000586801 OSCARQ8IYS5 282 aa24.99■■□□□ 1.59
CNTNAP1-203ENST00000586801 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
CNTNAP1-203ENST00000586801 ZNF608Q9ULD9 1512 aaPredicted RBP24.97■■□□□ 1.59
CNTNAP1-203ENST00000586801 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
CNTNAP1-203ENST00000586801 CHD1O14646 1710 aa24.83■■□□□ 1.57
CNTNAP1-203ENST00000586801 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
CNTNAP1-203ENST00000586801 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
CNTNAP1-203ENST00000586801 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
CNTNAP1-203ENST00000586801 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
CNTNAP1-203ENST00000586801 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.554e-13■■■■■ 64.7
CNTNAP1-203ENST00000586801 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
CNTNAP1-203ENST00000586801 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
CNTNAP1-203ENST00000586801 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.54
CNTNAP1-203ENST00000586801 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
CNTNAP1-203ENST00000586801 SOGA1O94964 1423 aa24.68■■□□□ 1.54
CNTNAP1-203ENST00000586801 CUX1P39880 1505 aa24.66■■□□□ 1.54
CNTNAP1-203ENST00000586801 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
CNTNAP1-203ENST00000586801 FBLN2P98095 1184 aa24.6■■□□□ 1.53
CNTNAP1-203ENST00000586801 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
CNTNAP1-203ENST00000586801 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
CNTNAP1-203ENST00000586801 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
CNTNAP1-203ENST00000586801 MAGI1Q96QZ7 1491 aaPredicted RBP24.52■■□□□ 1.52
CNTNAP1-203ENST00000586801 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
CNTNAP1-203ENST00000586801 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
CNTNAP1-203ENST00000586801 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
CNTNAP1-203ENST00000586801 CLASP1Q7Z460 1538 aa24.42■■□□□ 1.5
CNTNAP1-203ENST00000586801 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
CNTNAP1-203ENST00000586801 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
CNTNAP1-203ENST00000586801 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
CNTNAP1-203ENST00000586801 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
CNTNAP1-203ENST00000586801 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
CNTNAP1-203ENST00000586801 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
CNTNAP1-203ENST00000586801 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.5
CNTNAP1-203ENST00000586801 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
CNTNAP1-203ENST00000586801 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
CNTNAP1-203ENST00000586801 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
CNTNAP1-203ENST00000586801 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
CNTNAP1-203ENST00000586801 TRHP20396 242 aaPredicted RBP24.18■■□□□ 1.46
CNTNAP1-203ENST00000586801 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.45
CNTNAP1-203ENST00000586801 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
CNTNAP1-203ENST00000586801 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
CNTNAP1-203ENST00000586801 NUP160Q12769 1436 aa24.07■■□□□ 1.44
CNTNAP1-203ENST00000586801 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
CNTNAP1-203ENST00000586801 ERCC6L2Q5T890 1561 aa24.01■■□□□ 1.43
CNTNAP1-203ENST00000586801 RUSC2Q8N2Y8 1516 aa23.92■■□□□ 1.42
CNTNAP1-203ENST00000586801 CUL7Q14999 1698 aa23.9■■□□□ 1.42
CNTNAP1-203ENST00000586801 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
CNTNAP1-203ENST00000586801 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 250.8 ms