RNA–Protein interactions for RNA: ENST00000586793.6

GFAP-209, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-209ENST00000586793 NISCHQ9Y2I1 1504 aa31.81■■■□□ 2.68
GFAP-209ENST00000586793 CCDC180Q9P1Z9 1646 aa28.26■■■□□ 2.11
GFAP-209ENST00000586793 ABCC9O60706 1549 aa27.92■■■□□ 2.06
GFAP-209ENST00000586793 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
GFAP-209ENST00000586793 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
GFAP-209ENST00000586793 NACADO15069 1562 aa26.63■■□□□ 1.85
GFAP-209ENST00000586793 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
GFAP-209ENST00000586793 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
GFAP-209ENST00000586793 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
GFAP-209ENST00000586793 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
GFAP-209ENST00000586793 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
GFAP-209ENST00000586793 BICRAQ9NZM4 1560 aa25.94■■□□□ 1.74
GFAP-209ENST00000586793 SCRIBQ14160 1630 aa25.89■■□□□ 1.74
GFAP-209ENST00000586793 DNAJC5BQ9UF47 199 aa25.76■■□□□ 1.71
GFAP-209ENST00000586793 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
GFAP-209ENST00000586793 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
GFAP-209ENST00000586793 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
GFAP-209ENST00000586793 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.6
GFAP-209ENST00000586793 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
GFAP-209ENST00000586793 BAZ1AQ9NRL2 1556 aaPredicted RBP24.64■■□□□ 1.54
GFAP-209ENST00000586793 ATAD2BQ9ULI0 1458 aa24.63■■□□□ 1.53
GFAP-209ENST00000586793 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
GFAP-209ENST00000586793 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
GFAP-209ENST00000586793 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
GFAP-209ENST00000586793 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
GFAP-209ENST00000586793 PEG3Q9GZU2 1588 aa24.43■■□□□ 1.5
GFAP-209ENST00000586793 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
GFAP-209ENST00000586793 WIZO95785 1651 aa24.25■■□□□ 1.47
GFAP-209ENST00000586793 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
GFAP-209ENST00000586793 NESP48681 1621 aa24.13■■□□□ 1.45
GFAP-209ENST00000586793 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
GFAP-209ENST00000586793 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
GFAP-209ENST00000586793 LAMC3Q9Y6N6 1575 aa23.95■■□□□ 1.42
GFAP-209ENST00000586793 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
GFAP-209ENST00000586793 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.4
GFAP-209ENST00000586793 CUX2O14529 1486 aa23.8■■□□□ 1.4
GFAP-209ENST00000586793 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
GFAP-209ENST00000586793 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
GFAP-209ENST00000586793 CFTRP13569 1480 aa23.73■■□□□ 1.39
GFAP-209ENST00000586793 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
GFAP-209ENST00000586793 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
GFAP-209ENST00000586793 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
GFAP-209ENST00000586793 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
GFAP-209ENST00000586793 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
GFAP-209ENST00000586793 WDR62O43379 1518 aa23.53■■□□□ 1.36
GFAP-209ENST00000586793 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
GFAP-209ENST00000586793 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
GFAP-209ENST00000586793 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
GFAP-209ENST00000586793 DNAJC5Q9H3Z4 198 aa23.24■■□□□ 1.31
GFAP-209ENST00000586793 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
GFAP-209ENST00000586793 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
GFAP-209ENST00000586793 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
GFAP-209ENST00000586793 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.28
GFAP-209ENST00000586793 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
GFAP-209ENST00000586793 CUX1P39880 1505 aa23.04■■□□□ 1.28
GFAP-209ENST00000586793 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
GFAP-209ENST00000586793 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
GFAP-209ENST00000586793 TARBP1Q13395 1621 aaKnown RBP22.97■■□□□ 1.27
GFAP-209ENST00000586793 SOGA1O94964 1423 aa22.94■■□□□ 1.26
GFAP-209ENST00000586793 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
GFAP-209ENST00000586793 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
GFAP-209ENST00000586793 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
GFAP-209ENST00000586793 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.25
GFAP-209ENST00000586793 OSCARQ8IYS5 282 aa22.8■■□□□ 1.24
GFAP-209ENST00000586793 SYNJ1O43426 1573 aa22.79■■□□□ 1.24
GFAP-209ENST00000586793 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
GFAP-209ENST00000586793 BIVM-ERCC5R4GMW8 1640 aa22.74■■□□□ 1.23
GFAP-209ENST00000586793 WDR97A6NE52 1622 aa22.73■■□□□ 1.23
GFAP-209ENST00000586793 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
GFAP-209ENST00000586793 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
GFAP-209ENST00000586793 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
GFAP-209ENST00000586793 FBLN2P98095 1184 aa22.68■■□□□ 1.22
GFAP-209ENST00000586793 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
GFAP-209ENST00000586793 CHD1O14646 1710 aa22.64■■□□□ 1.21
GFAP-209ENST00000586793 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
GFAP-209ENST00000586793 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
GFAP-209ENST00000586793 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
GFAP-209ENST00000586793 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
GFAP-209ENST00000586793 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
GFAP-209ENST00000586793 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
GFAP-209ENST00000586793 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
GFAP-209ENST00000586793 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
GFAP-209ENST00000586793 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
GFAP-209ENST00000586793 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
GFAP-209ENST00000586793 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
GFAP-209ENST00000586793 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
GFAP-209ENST00000586793 CLASP1Q7Z460 1538 aa22.42■■□□□ 1.18
GFAP-209ENST00000586793 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
GFAP-209ENST00000586793 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
GFAP-209ENST00000586793 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
GFAP-209ENST00000586793 NUP160Q12769 1436 aa22.31■■□□□ 1.16
GFAP-209ENST00000586793 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
GFAP-209ENST00000586793 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
GFAP-209ENST00000586793 IGF1RP08069 1367 aa22.29■■□□□ 1.16
GFAP-209ENST00000586793 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
GFAP-209ENST00000586793 CUL7Q14999 1698 aa22.17■■□□□ 1.14
GFAP-209ENST00000586793 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
GFAP-209ENST00000586793 CARMIL1Q5VZK9 1371 aa22.15■■□□□ 1.14
GFAP-209ENST00000586793 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
GFAP-209ENST00000586793 SHROOM2Q13796 1616 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms