RNA–Protein interactions for RNA: ENST00000586759.1

GADD45B-203, Transcript of growth arrest and DNA damage inducible beta, humanhuman

Gene GADD45B, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45B-203ENST00000586759 NISCHQ9Y2I1 1504 aa52.6■■■■■ 6.01
GADD45B-203ENST00000586759 CCDC180Q9P1Z9 1646 aa46.95■■■■■ 5.11
GADD45B-203ENST00000586759 ABCC9O60706 1549 aa46.14■■■■■ 4.98
GADD45B-203ENST00000586759 RB1CC1Q8TDY2 1594 aa44.28■■■■■ 4.68
GADD45B-203ENST00000586759 NACADO15069 1562 aa44.16■■■■■ 4.66
GADD45B-203ENST00000586759 MYO15BQ96JP2 1530 aa43.83■■■■■ 4.61
GADD45B-203ENST00000586759 DCAF8L2P0C7V8 631 aa43.83■■■■■ 4.61
GADD45B-203ENST00000586759 ZCCHC6Q5VYS8 1495 aaKnown RBP43.8■■■■■ 4.6
GADD45B-203ENST00000586759 DCAF1Q9Y4B6 1507 aa43.53■■■■■ 4.56
GADD45B-203ENST00000586759 UNC13AQ9UPW8 1703 aa43.34■■■■■ 4.53
GADD45B-203ENST00000586759 BICRAQ9NZM4 1560 aa43.02■■■■■ 4.48
GADD45B-203ENST00000586759 PABPN1Q86U42 306 aaKnown RBP eCLIP42.99■■■■■ 4.47
GADD45B-203ENST00000586759 SCRIBQ14160 1630 aa42.79■■■■■ 4.44
GADD45B-203ENST00000586759 DNAJC5BQ9UF47 199 aa42.59■■■■■ 4.41
GADD45B-203ENST00000586759 SHROOM4Q9ULL8 1493 aa42.53■■■■■ 4.4
GADD45B-203ENST00000586759 EIF4G1Q04637 1599 aaKnown RBP41.87■■■■■ 4.29
GADD45B-203ENST00000586759 CC2D2AQ9P2K1 1620 aa41.77■■■■■ 4.28
GADD45B-203ENST00000586759 CECR2Q9BXF3 1484 aa41.5■■■■■ 4.23
GADD45B-203ENST00000586759 SMARCA4P51532 1647 aa40.91■■■■■ 4.14
GADD45B-203ENST00000586759 BAZ1AQ9NRL2 1556 aaPredicted RBP40.78■■■■■ 4.12
GADD45B-203ENST00000586759 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
GADD45B-203ENST00000586759 ATAD2BQ9ULI0 1458 aa40.72■■■■■ 4.11
GADD45B-203ENST00000586759 SMARCA2P51531 1590 aa40.66■■■■■ 4.1
GADD45B-203ENST00000586759 HMGXB3Q12766 1538 aa40.57■■■■■ 4.09
GADD45B-203ENST00000586759 MROH2BQ7Z745 1585 aa40.53■■■■■ 4.08
GADD45B-203ENST00000586759 PEG3Q9GZU2 1588 aa40.53■■■■■ 4.08
GADD45B-203ENST00000586759 BAZ1BQ9UIG0 1483 aaKnown RBP40.36■■■■■ 4.05
GADD45B-203ENST00000586759 WIZO95785 1651 aa40.08■■■■■ 4.01
GADD45B-203ENST00000586759 RSF1Q96T23 1441 aaPredicted RBP39.93■■■■□ 3.98
GADD45B-203ENST00000586759 NESP48681 1621 aa39.87■■■■□ 3.97
GADD45B-203ENST00000586759 ERCC6Q03468 1493 aa39.77■■■■□ 3.96
GADD45B-203ENST00000586759 LAMC3Q9Y6N6 1575 aa39.74■■■■□ 3.95
GADD45B-203ENST00000586759 TOP2AP11388 1531 aaKnown RBP39.66■■■■□ 3.94
GADD45B-203ENST00000586759 CUX2O14529 1486 aa39.52■■■■□ 3.92
GADD45B-203ENST00000586759 CADPSQ9ULU8 1353 aa39.5■■■■□ 3.91
GADD45B-203ENST00000586759 KIF21AQ7Z4S6 1674 aa39.43■■■■□ 3.9
GADD45B-203ENST00000586759 PDS5BQ9NTI5 1447 aa39.41■■■■□ 3.9
GADD45B-203ENST00000586759 THOC2Q8NI27 1593 aaKnown RBP39.41■■■■□ 3.9
GADD45B-203ENST00000586759 CFTRP13569 1480 aa39.24■■■■□ 3.87
GADD45B-203ENST00000586759 CCDC88BA6NC98 1476 aa39.14■■■■□ 3.86
GADD45B-203ENST00000586759 MRC2Q9UBG0 1479 aa39.09■■■■□ 3.85
GADD45B-203ENST00000586759 FANCD2Q9BXW9 1451 aa39.08■■■■□ 3.85
GADD45B-203ENST00000586759 CEP164Q9UPV0 1460 aa39.06■■■■□ 3.84
GADD45B-203ENST00000586759 WDR62O43379 1518 aa39■■■■□ 3.83
GADD45B-203ENST00000586759 PRDM2Q13029 1718 aa39■■■■□ 3.83
GADD45B-203ENST00000586759 URB2Q14146 1524 aaKnown RBP38.75■■■■□ 3.79
GADD45B-203ENST00000586759 DNAJC5Q9H3Z4 198 aa38.56■■■■□ 3.76
GADD45B-203ENST00000586759 SUPT5HO00267 1087 aaKnown RBP38.54■■■■□ 3.76
GADD45B-203ENST00000586759 TOPBP1Q92547 1522 aa38.44■■■■□ 3.74
GADD45B-203ENST00000586759 DNMBPQ6XZF7 1577 aa38.39■■■■□ 3.74
GADD45B-203ENST00000586759 ABCC8Q09428 1581 aa38.36■■■■□ 3.73
GADD45B-203ENST00000586759 IFT140Q96RY7 1462 aa38.26■■■■□ 3.72
GADD45B-203ENST00000586759 ZNF608Q9ULD9 1512 aaPredicted RBP38.13■■■■□ 3.69
GADD45B-203ENST00000586759 POLA1P09884 1462 aaPredicted RBP38.1■■■■□ 3.69
GADD45B-203ENST00000586759 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
GADD45B-203ENST00000586759 CUX1P39880 1505 aa38.06■■■■□ 3.68
GADD45B-203ENST00000586759 EIF4G3O43432 1585 aaKnown RBP38.02■■■■□ 3.68
GADD45B-203ENST00000586759 FGD5Q6ZNL6 1462 aa37.95■■■■□ 3.67
GADD45B-203ENST00000586759 RAD54L2Q9Y4B4 1467 aa37.9■■■■□ 3.66
GADD45B-203ENST00000586759 SOGA1O94964 1423 aa37.86■■■■□ 3.65
GADD45B-203ENST00000586759 AQRO60306 1485 aaKnown RBP eCLIP37.83■■■■□ 3.656e-9■■■■■ 29.6
GADD45B-203ENST00000586759 WDR97A6NE52 1622 aa37.76■■■■□ 3.64
GADD45B-203ENST00000586759 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
GADD45B-203ENST00000586759 OSCARQ8IYS5 282 aa37.68■■■■□ 3.62
GADD45B-203ENST00000586759 BIVM-ERCC5R4GMW8 1640 aa37.68■■■■□ 3.62
GADD45B-203ENST00000586759 TOP2BQ02880 1626 aa37.65■■■■□ 3.62
GADD45B-203ENST00000586759 SYNJ1O43426 1573 aa37.64■■■■□ 3.62
GADD45B-203ENST00000586759 WRNQ14191 1432 aaPredicted RBP eCLIP37.64■■■■□ 3.62
GADD45B-203ENST00000586759 ABCA10Q8WWZ4 1543 aa37.58■■■■□ 3.61
GADD45B-203ENST00000586759 CHD1O14646 1710 aa37.58■■■■□ 3.61
GADD45B-203ENST00000586759 SNAPC4Q5SXM2 1469 aa37.52■■■■□ 3.6
GADD45B-203ENST00000586759 ABCA5Q8WWZ7 1642 aa37.51■■■■□ 3.6
GADD45B-203ENST00000586759 GRIN2BQ13224 1484 aa37.51■■■■□ 3.59
GADD45B-203ENST00000586759 PBRM1Q86U86 1689 aa37.47■■■■□ 3.59
GADD45B-203ENST00000586759 GAPVD1Q14C86 1478 aa37.45■■■■□ 3.59
GADD45B-203ENST00000586759 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
GADD45B-203ENST00000586759 FBLN2P98095 1184 aa37.32■■■■□ 3.56
GADD45B-203ENST00000586759 SYNJ2O15056 1496 aa37.31■■■■□ 3.56
GADD45B-203ENST00000586759 RIMBP3CA6NJZ7 1639 aa37.28■■■■□ 3.56
GADD45B-203ENST00000586759 RIMBP3BA6NNM3 1639 aa37.28■■■■□ 3.56
GADD45B-203ENST00000586759 RIMBP3Q9UFD9 1639 aa37.28■■■■□ 3.56
GADD45B-203ENST00000586759 ARHGEF11O15085 1522 aa37.22■■■■□ 3.55
GADD45B-203ENST00000586759 CHMP7Q8WUX9 453 aaPredicted RBP37.19■■■■□ 3.54
GADD45B-203ENST00000586759 CLASP1Q7Z460 1538 aa37.19■■■■□ 3.54
GADD45B-203ENST00000586759 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
GADD45B-203ENST00000586759 ERICH3Q5RHP9 1530 aa37.12■■■■□ 3.53
GADD45B-203ENST00000586759 TRIM41Q8WV44 630 aa37.12■■■■□ 3.53
GADD45B-203ENST00000586759 GRIN2AQ12879 1464 aa37.04■■■■□ 3.52
GADD45B-203ENST00000586759 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
GADD45B-203ENST00000586759 ARAP1Q96P48 1450 aa36.93■■■■□ 3.5
GADD45B-203ENST00000586759 CEP170Q5SW79 1584 aa36.91■■■■□ 3.5
GADD45B-203ENST00000586759 NUP160Q12769 1436 aa36.9■■■■□ 3.5
GADD45B-203ENST00000586759 KIF27Q86VH2 1401 aa36.85■■■■□ 3.49
GADD45B-203ENST00000586759 IGF1RP08069 1367 aa36.75■■■■□ 3.47
GADD45B-203ENST00000586759 CUL7Q14999 1698 aa36.74■■■■□ 3.47
GADD45B-203ENST00000586759 CYB5RLQ6IPT4 315 aa36.74■■■■□ 3.47
GADD45B-203ENST00000586759 SHROOM2Q13796 1616 aa36.7■■■■□ 3.47
GADD45B-203ENST00000586759 RUSC2Q8N2Y8 1516 aa36.64■■■■□ 3.46
GADD45B-203ENST00000586759 ERCC6L2Q5T890 1561 aa36.63■■■■□ 3.45
GADD45B-203ENST00000586759 CARMIL1Q5VZK9 1371 aa36.51■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms