RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
LAMA3-205ENST00000586709 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
LAMA3-205ENST00000586709 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
LAMA3-205ENST00000586709 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
LAMA3-205ENST00000586709 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
LAMA3-205ENST00000586709 CCDC180Q9P1Z9 1646 aa22.01■■□□□ 1.11
LAMA3-205ENST00000586709 FOXD1Q16676 465 aa21.63■■□□□ 1.05
LAMA3-205ENST00000586709 ABCC9O60706 1549 aa21.58■■□□□ 1.04
LAMA3-205ENST00000586709 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
LAMA3-205ENST00000586709 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
LAMA3-205ENST00000586709 NACADO15069 1562 aa20.67■□□□□ 0.9
LAMA3-205ENST00000586709 MSH5O43196 834 aa20.6■□□□□ 0.89
LAMA3-205ENST00000586709 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
LAMA3-205ENST00000586709 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
LAMA3-205ENST00000586709 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
LAMA3-205ENST00000586709 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
LAMA3-205ENST00000586709 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
LAMA3-205ENST00000586709 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
LAMA3-205ENST00000586709 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
LAMA3-205ENST00000586709 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
LAMA3-205ENST00000586709 SCRIBQ14160 1630 aa20.02■□□□□ 0.8
LAMA3-205ENST00000586709 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
LAMA3-205ENST00000586709 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
LAMA3-205ENST00000586709 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
LAMA3-205ENST00000586709 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
LAMA3-205ENST00000586709 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
LAMA3-205ENST00000586709 ADRA2BP18089 450 aa19.59■□□□□ 0.73
LAMA3-205ENST00000586709 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
LAMA3-205ENST00000586709 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
LAMA3-205ENST00000586709 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
LAMA3-205ENST00000586709 BAZ1AQ9NRL2 1556 aaPredicted RBP19.08■□□□□ 0.65
LAMA3-205ENST00000586709 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
LAMA3-205ENST00000586709 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
LAMA3-205ENST00000586709 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
LAMA3-205ENST00000586709 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
LAMA3-205ENST00000586709 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
LAMA3-205ENST00000586709 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
LAMA3-205ENST00000586709 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
LAMA3-205ENST00000586709 WIZO95785 1651 aa18.77■□□□□ 0.6
LAMA3-205ENST00000586709 NESP48681 1621 aa18.63■□□□□ 0.57
LAMA3-205ENST00000586709 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
LAMA3-205ENST00000586709 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
LAMA3-205ENST00000586709 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
LAMA3-205ENST00000586709 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
LAMA3-205ENST00000586709 KIF21AQ7Z4S6 1674 aa18.51■□□□□ 0.55
LAMA3-205ENST00000586709 CUX2O14529 1486 aa18.49■□□□□ 0.55
LAMA3-205ENST00000586709 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
LAMA3-205ENST00000586709 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
LAMA3-205ENST00000586709 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
LAMA3-205ENST00000586709 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
LAMA3-205ENST00000586709 CFTRP13569 1480 aa18.33■□□□□ 0.52
LAMA3-205ENST00000586709 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
LAMA3-205ENST00000586709 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
LAMA3-205ENST00000586709 MRC2Q9UBG0 1479 aa18.27■□□□□ 0.52
LAMA3-205ENST00000586709 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
LAMA3-205ENST00000586709 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
LAMA3-205ENST00000586709 WDR62O43379 1518 aa18.24■□□□□ 0.51
LAMA3-205ENST00000586709 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
LAMA3-205ENST00000586709 URB2Q14146 1524 aaKnown RBP18.1■□□□□ 0.49
LAMA3-205ENST00000586709 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
LAMA3-205ENST00000586709 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
LAMA3-205ENST00000586709 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
LAMA3-205ENST00000586709 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
LAMA3-205ENST00000586709 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
LAMA3-205ENST00000586709 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
LAMA3-205ENST00000586709 ABCC8Q09428 1581 aa17.96■□□□□ 0.46
LAMA3-205ENST00000586709 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
LAMA3-205ENST00000586709 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.44
LAMA3-205ENST00000586709 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
LAMA3-205ENST00000586709 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
LAMA3-205ENST00000586709 POLA1P09884 1462 aaPredicted RBP17.8■□□□□ 0.44
LAMA3-205ENST00000586709 CUX1P39880 1505 aa17.78■□□□□ 0.44
LAMA3-205ENST00000586709 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
LAMA3-205ENST00000586709 RAD54L2Q9Y4B4 1467 aa17.7■□□□□ 0.42
LAMA3-205ENST00000586709 SOGA1O94964 1423 aa17.7■□□□□ 0.42
LAMA3-205ENST00000586709 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
LAMA3-205ENST00000586709 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.42
LAMA3-205ENST00000586709 CHD1O14646 1710 aa17.65■□□□□ 0.42
LAMA3-205ENST00000586709 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
LAMA3-205ENST00000586709 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
LAMA3-205ENST00000586709 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
LAMA3-205ENST00000586709 TDRD9Q8NDG6 1382 aaKnown RBP17.6■□□□□ 0.41
LAMA3-205ENST00000586709 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
LAMA3-205ENST00000586709 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
LAMA3-205ENST00000586709 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
LAMA3-205ENST00000586709 ABCA10Q8WWZ4 1543 aa17.56■□□□□ 0.4
LAMA3-205ENST00000586709 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
LAMA3-205ENST00000586709 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
LAMA3-205ENST00000586709 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
LAMA3-205ENST00000586709 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
LAMA3-205ENST00000586709 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
LAMA3-205ENST00000586709 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
LAMA3-205ENST00000586709 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
LAMA3-205ENST00000586709 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
LAMA3-205ENST00000586709 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
LAMA3-205ENST00000586709 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
LAMA3-205ENST00000586709 FBLN2P98095 1184 aa17.46■□□□□ 0.39
LAMA3-205ENST00000586709 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
LAMA3-205ENST00000586709 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
LAMA3-205ENST00000586709 CLASP1Q7Z460 1538 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms