RNA–Protein interactions for RNA: ENST00000586549.1

SLC44A2-204, Transcript of solute carrier family 44 member 2, humanhuman

TSL 5

Gene SLC44A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2-204ENST00000586549 NISCHQ9Y2I1 1504 aa45.69■■■■■ 4.9
SLC44A2-204ENST00000586549 CCDC180Q9P1Z9 1646 aa40.67■■■■■ 4.1
SLC44A2-204ENST00000586549 ABCC9O60706 1549 aa39.9■■■■□ 3.98
SLC44A2-204ENST00000586549 RB1CC1Q8TDY2 1594 aa38.33■■■■□ 3.73
SLC44A2-204ENST00000586549 NACADO15069 1562 aa38.25■■■■□ 3.71
SLC44A2-204ENST00000586549 DCAF8L2P0C7V8 631 aa38.23■■■■□ 3.71
SLC44A2-204ENST00000586549 ZCCHC6Q5VYS8 1495 aaKnown RBP38.05■■■■□ 3.68
SLC44A2-204ENST00000586549 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
SLC44A2-204ENST00000586549 DCAF1Q9Y4B6 1507 aa37.79■■■■□ 3.64
SLC44A2-204ENST00000586549 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
SLC44A2-204ENST00000586549 PABPN1Q86U42 306 aaKnown RBP eCLIP37.25■■■■□ 3.55
SLC44A2-204ENST00000586549 BICRAQ9NZM4 1560 aa37.16■■■■□ 3.54
SLC44A2-204ENST00000586549 SCRIBQ14160 1630 aa37.14■■■■□ 3.54
SLC44A2-204ENST00000586549 SHROOM4Q9ULL8 1493 aa36.76■■■■□ 3.47
SLC44A2-204ENST00000586549 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
SLC44A2-204ENST00000586549 EIF4G1Q04637 1599 aaKnown RBP36.2■■■■□ 3.39
SLC44A2-204ENST00000586549 CC2D2AQ9P2K1 1620 aa36.07■■■■□ 3.37
SLC44A2-204ENST00000586549 CECR2Q9BXF3 1484 aa35.85■■■■□ 3.33
SLC44A2-204ENST00000586549 SMARCA4P51532 1647 aa35.49■■■■□ 3.27
SLC44A2-204ENST00000586549 BAZ1AQ9NRL2 1556 aaPredicted RBP35.44■■■■□ 3.26
SLC44A2-204ENST00000586549 ATAD2BQ9ULI0 1458 aa35.3■■■■□ 3.24
SLC44A2-204ENST00000586549 NCAPD3P42695 1498 aa35.28■■■■□ 3.24
SLC44A2-204ENST00000586549 SMARCA2P51531 1590 aa35.26■■■■□ 3.24
SLC44A2-204ENST00000586549 MROH2BQ7Z745 1585 aa35.22■■■■□ 3.23
SLC44A2-204ENST00000586549 HMGXB3Q12766 1538 aa35.13■■■■□ 3.21
SLC44A2-204ENST00000586549 PEG3Q9GZU2 1588 aa35.12■■■■□ 3.21
SLC44A2-204ENST00000586549 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
SLC44A2-204ENST00000586549 WIZO95785 1651 aa34.85■■■■□ 3.17
SLC44A2-204ENST00000586549 RSF1Q96T23 1441 aaPredicted RBP34.77■■■■□ 3.16
SLC44A2-204ENST00000586549 NESP48681 1621 aa34.49■■■■□ 3.11
SLC44A2-204ENST00000586549 TOP2AP11388 1531 aaKnown RBP34.47■■■■□ 3.11
SLC44A2-204ENST00000586549 ERCC6Q03468 1493 aa34.41■■■■□ 3.1
SLC44A2-204ENST00000586549 LAMC3Q9Y6N6 1575 aa34.39■■■■□ 3.1
SLC44A2-204ENST00000586549 CADPSQ9ULU8 1353 aa34.25■■■■□ 3.07
SLC44A2-204ENST00000586549 PDS5BQ9NTI5 1447 aa34.15■■■■□ 3.06
SLC44A2-204ENST00000586549 KIF21AQ7Z4S6 1674 aa34.1■■■■□ 3.05
SLC44A2-204ENST00000586549 CCDC88BA6NC98 1476 aa34.05■■■■□ 3.04
SLC44A2-204ENST00000586549 CUX2O14529 1486 aa34.05■■■■□ 3.04
SLC44A2-204ENST00000586549 CFTRP13569 1480 aa34.04■■■■□ 3.04
SLC44A2-204ENST00000586549 THOC2Q8NI27 1593 aaKnown RBP33.99■■■■□ 3.03
SLC44A2-204ENST00000586549 FANCD2Q9BXW9 1451 aa33.89■■■■□ 3.02
SLC44A2-204ENST00000586549 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
SLC44A2-204ENST00000586549 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
SLC44A2-204ENST00000586549 MRC2Q9UBG0 1479 aa33.83■■■■□ 3.01
SLC44A2-204ENST00000586549 PRDM2Q13029 1718 aa33.81■■■■□ 3
SLC44A2-204ENST00000586549 WDR62O43379 1518 aa33.71■■■□□ 2.99
SLC44A2-204ENST00000586549 URB2Q14146 1524 aaKnown RBP33.55■■■□□ 2.96
SLC44A2-204ENST00000586549 TOPBP1Q92547 1522 aa33.33■■■□□ 2.93
SLC44A2-204ENST00000586549 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
SLC44A2-204ENST00000586549 DNMBPQ6XZF7 1577 aa33.29■■■□□ 2.92
SLC44A2-204ENST00000586549 IFT140Q96RY7 1462 aa33.14■■■□□ 2.9
SLC44A2-204ENST00000586549 DNAJC5Q9H3Z4 198 aa33.06■■■□□ 2.88
SLC44A2-204ENST00000586549 CUX1P39880 1505 aa33.05■■■□□ 2.88
SLC44A2-204ENST00000586549 POLA1P09884 1462 aaPredicted RBP33.05■■■□□ 2.88
SLC44A2-204ENST00000586549 ZNF608Q9ULD9 1512 aaPredicted RBP33■■■□□ 2.87
SLC44A2-204ENST00000586549 TARBP1Q13395 1621 aaKnown RBP32.97■■■□□ 2.87
SLC44A2-204ENST00000586549 FGD5Q6ZNL6 1462 aa32.96■■■□□ 2.87
SLC44A2-204ENST00000586549 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
SLC44A2-204ENST00000586549 SOGA1O94964 1423 aa32.9■■■□□ 2.86
SLC44A2-204ENST00000586549 EIF4G3O43432 1585 aaKnown RBP32.9■■■□□ 2.86
SLC44A2-204ENST00000586549 AQRO60306 1485 aaKnown RBP eCLIP32.81■■■□□ 2.84
SLC44A2-204ENST00000586549 WRNQ14191 1432 aaPredicted RBP eCLIP32.8■■■□□ 2.84
SLC44A2-204ENST00000586549 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
SLC44A2-204ENST00000586549 TOP2BQ02880 1626 aa32.74■■■□□ 2.83
SLC44A2-204ENST00000586549 BIVM-ERCC5R4GMW8 1640 aa32.74■■■□□ 2.83
SLC44A2-204ENST00000586549 TDRD9Q8NDG6 1382 aaKnown RBP32.73■■■□□ 2.83
SLC44A2-204ENST00000586549 WDR97A6NE52 1622 aa32.71■■■□□ 2.83
SLC44A2-204ENST00000586549 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
SLC44A2-204ENST00000586549 OSCARQ8IYS5 282 aa32.59■■■□□ 2.81
SLC44A2-204ENST00000586549 GRIN2BQ13224 1484 aa32.53■■■□□ 2.8
SLC44A2-204ENST00000586549 GAPVD1Q14C86 1478 aa32.52■■■□□ 2.8
SLC44A2-204ENST00000586549 SNAPC4Q5SXM2 1469 aa32.52■■■□□ 2.8
SLC44A2-204ENST00000586549 ABCA5Q8WWZ7 1642 aa32.52■■■□□ 2.8
SLC44A2-204ENST00000586549 PBRM1Q86U86 1689 aa32.49■■■□□ 2.79
SLC44A2-204ENST00000586549 CHD1O14646 1710 aa32.49■■■□□ 2.79
SLC44A2-204ENST00000586549 MAGI1Q96QZ7 1491 aaPredicted RBP32.46■■■□□ 2.79
SLC44A2-204ENST00000586549 FBLN2P98095 1184 aa32.44■■■□□ 2.78
SLC44A2-204ENST00000586549 SYNJ2O15056 1496 aa32.33■■■□□ 2.77
SLC44A2-204ENST00000586549 CHMP7Q8WUX9 453 aaPredicted RBP32.32■■■□□ 2.76
SLC44A2-204ENST00000586549 ERICH3Q5RHP9 1530 aa32.24■■■□□ 2.75
SLC44A2-204ENST00000586549 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
SLC44A2-204ENST00000586549 FHAD1B1AJZ9 1412 aa32.14■■■□□ 2.74
SLC44A2-204ENST00000586549 RIMBP3CA6NJZ7 1639 aa32.13■■■□□ 2.73
SLC44A2-204ENST00000586549 RIMBP3BA6NNM3 1639 aa32.13■■■□□ 2.73
SLC44A2-204ENST00000586549 RIMBP3Q9UFD9 1639 aa32.13■■■□□ 2.73
SLC44A2-204ENST00000586549 CLASP1Q7Z460 1538 aa32.12■■■□□ 2.73
SLC44A2-204ENST00000586549 GRIN2AQ12879 1464 aa32.12■■■□□ 2.73
SLC44A2-204ENST00000586549 KIF27Q86VH2 1401 aa32.12■■■□□ 2.73
SLC44A2-204ENST00000586549 ARHGEF11O15085 1522 aa32.11■■■□□ 2.73
SLC44A2-204ENST00000586549 TRIM41Q8WV44 630 aa32.01■■■□□ 2.72
SLC44A2-204ENST00000586549 IGF1RP08069 1367 aa31.98■■■□□ 2.71
SLC44A2-204ENST00000586549 CEP170Q5SW79 1584 aa31.97■■■□□ 2.71
SLC44A2-204ENST00000586549 NUP160Q12769 1436 aa31.96■■■□□ 2.71
SLC44A2-204ENST00000586549 CUL7Q14999 1698 aa31.94■■■□□ 2.7
SLC44A2-204ENST00000586549 ARAP1Q96P48 1450 aa31.84■■■□□ 2.69
SLC44A2-204ENST00000586549 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
SLC44A2-204ENST00000586549 CARMIL1Q5VZK9 1371 aa31.8■■■□□ 2.68
SLC44A2-204ENST00000586549 CYB5RLQ6IPT4 315 aa31.79■■■□□ 2.68
SLC44A2-204ENST00000586549 SHROOM2Q13796 1616 aa31.74■■■□□ 2.67
SLC44A2-204ENST00000586549 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms