RNA–Protein interactions for RNA: ENST00000586514.5

SMAD2-207, Transcript of SMAD family member 2, humanhuman

TSL 5

Gene SMAD2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-207ENST00000586514 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
SMAD2-207ENST00000586514 CCDC180Q9P1Z9 1646 aa35.6■■■■□ 3.29
SMAD2-207ENST00000586514 ABCC9O60706 1549 aa35.41■■■■□ 3.26
SMAD2-207ENST00000586514 RB1CC1Q8TDY2 1594 aa33.81■■■■□ 3
SMAD2-207ENST00000586514 NACADO15069 1562 aa33.59■■■□□ 2.97
SMAD2-207ENST00000586514 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
SMAD2-207ENST00000586514 MYO15BQ96JP2 1530 aa33.14■■■□□ 2.9
SMAD2-207ENST00000586514 UNC13AQ9UPW8 1703 aa33.06■■■□□ 2.88
SMAD2-207ENST00000586514 DNAJC5BQ9UF47 199 aa32.99■■■□□ 2.87
SMAD2-207ENST00000586514 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
SMAD2-207ENST00000586514 ZCCHC6Q5VYS8 1495 aaKnown RBP32.9■■■□□ 2.86
SMAD2-207ENST00000586514 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
SMAD2-207ENST00000586514 BICRAQ9NZM4 1560 aa32.75■■■□□ 2.83
SMAD2-207ENST00000586514 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
SMAD2-207ENST00000586514 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
SMAD2-207ENST00000586514 CC2D2AQ9P2K1 1620 aa32.01■■■□□ 2.72
SMAD2-207ENST00000586514 EIF4G1Q04637 1599 aaKnown RBP31.98■■■□□ 2.71
SMAD2-207ENST00000586514 CECR2Q9BXF3 1484 aa31.89■■■□□ 2.7
SMAD2-207ENST00000586514 NCAPD3P42695 1498 aa30.95■■■□□ 2.55
SMAD2-207ENST00000586514 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
SMAD2-207ENST00000586514 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.53
SMAD2-207ENST00000586514 SMARCA2P51531 1590 aa30.87■■■□□ 2.53
SMAD2-207ENST00000586514 BAZ1AQ9NRL2 1556 aaPredicted RBP30.82■■■□□ 2.52
SMAD2-207ENST00000586514 HMGXB3Q12766 1538 aa30.79■■■□□ 2.52
SMAD2-207ENST00000586514 BAZ1BQ9UIG0 1483 aaKnown RBP30.65■■■□□ 2.5
SMAD2-207ENST00000586514 ERCC6Q03468 1493 aa30.62■■■□□ 2.49
SMAD2-207ENST00000586514 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
SMAD2-207ENST00000586514 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
SMAD2-207ENST00000586514 CUX2O14529 1486 aa30.49■■■□□ 2.47
SMAD2-207ENST00000586514 NESP48681 1621 aa30.44■■■□□ 2.46
SMAD2-207ENST00000586514 LAMC3Q9Y6N6 1575 aa30.3■■■□□ 2.44
SMAD2-207ENST00000586514 DNAJC5Q9H3Z4 198 aa30.25■■■□□ 2.43
SMAD2-207ENST00000586514 WIZO95785 1651 aa30.22■■■□□ 2.43
SMAD2-207ENST00000586514 THOC2Q8NI27 1593 aaKnown RBP30.14■■■□□ 2.42
SMAD2-207ENST00000586514 KIF21AQ7Z4S6 1674 aa30.12■■■□□ 2.41
SMAD2-207ENST00000586514 PDS5BQ9NTI5 1447 aa30.11■■■□□ 2.41
SMAD2-207ENST00000586514 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
SMAD2-207ENST00000586514 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
SMAD2-207ENST00000586514 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
SMAD2-207ENST00000586514 MRC2Q9UBG0 1479 aa29.84■■■□□ 2.37
SMAD2-207ENST00000586514 CEP164Q9UPV0 1460 aa29.76■■■□□ 2.35
SMAD2-207ENST00000586514 WDR62O43379 1518 aa29.76■■■□□ 2.35
SMAD2-207ENST00000586514 CFTRP13569 1480 aa29.72■■■□□ 2.35
SMAD2-207ENST00000586514 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
SMAD2-207ENST00000586514 PRDM2Q13029 1718 aa29.56■■■□□ 2.32
SMAD2-207ENST00000586514 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
SMAD2-207ENST00000586514 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.31
SMAD2-207ENST00000586514 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
SMAD2-207ENST00000586514 IFT140Q96RY7 1462 aa29.15■■■□□ 2.26
SMAD2-207ENST00000586514 ABCC8Q09428 1581 aa29.14■■■□□ 2.26
SMAD2-207ENST00000586514 DNMBPQ6XZF7 1577 aa29.1■■■□□ 2.25
SMAD2-207ENST00000586514 OSCARQ8IYS5 282 aa29.09■■■□□ 2.25
SMAD2-207ENST00000586514 ZNF608Q9ULD9 1512 aaPredicted RBP29.05■■■□□ 2.24
SMAD2-207ENST00000586514 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
SMAD2-207ENST00000586514 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
SMAD2-207ENST00000586514 TARBP1Q13395 1621 aaKnown RBP28.9■■■□□ 2.22
SMAD2-207ENST00000586514 POLA1P09884 1462 aaPredicted RBP28.87■■■□□ 2.21
SMAD2-207ENST00000586514 AQRO60306 1485 aaKnown RBP eCLIP28.8■■■□□ 2.2
SMAD2-207ENST00000586514 CHD1O14646 1710 aa28.75■■■□□ 2.19
SMAD2-207ENST00000586514 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
SMAD2-207ENST00000586514 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
SMAD2-207ENST00000586514 RIMBP3CA6NJZ7 1639 aa28.73■■■□□ 2.19
SMAD2-207ENST00000586514 RIMBP3BA6NNM3 1639 aa28.73■■■□□ 2.19
SMAD2-207ENST00000586514 RIMBP3Q9UFD9 1639 aa28.73■■■□□ 2.19
SMAD2-207ENST00000586514 SOGA1O94964 1423 aa28.73■■■□□ 2.19
SMAD2-207ENST00000586514 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
SMAD2-207ENST00000586514 CUX1P39880 1505 aa28.7■■■□□ 2.19
SMAD2-207ENST00000586514 WDR97A6NE52 1622 aa28.66■■■□□ 2.18
SMAD2-207ENST00000586514 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
SMAD2-207ENST00000586514 ARHGEF11O15085 1522 aa28.64■■■□□ 2.18
SMAD2-207ENST00000586514 FBLN2P98095 1184 aa28.62■■■□□ 2.17
SMAD2-207ENST00000586514 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
SMAD2-207ENST00000586514 GRIN2BQ13224 1484 aa28.5■■■□□ 2.15
SMAD2-207ENST00000586514 MAGI1Q96QZ7 1491 aaPredicted RBP28.49■■■□□ 2.15
SMAD2-207ENST00000586514 PBRM1Q86U86 1689 aa28.45■■■□□ 2.15
SMAD2-207ENST00000586514 CHMP7Q8WUX9 453 aaPredicted RBP28.43■■■□□ 2.14
SMAD2-207ENST00000586514 GAPVD1Q14C86 1478 aa28.41■■■□□ 2.14
SMAD2-207ENST00000586514 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
SMAD2-207ENST00000586514 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
SMAD2-207ENST00000586514 CYB5RLQ6IPT4 315 aa28.39■■■□□ 2.14
SMAD2-207ENST00000586514 SYNJ2O15056 1496 aa28.39■■■□□ 2.13
SMAD2-207ENST00000586514 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
SMAD2-207ENST00000586514 CLASP1Q7Z460 1538 aa28.36■■■□□ 2.13
SMAD2-207ENST00000586514 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
SMAD2-207ENST00000586514 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
SMAD2-207ENST00000586514 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
SMAD2-207ENST00000586514 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
SMAD2-207ENST00000586514 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
SMAD2-207ENST00000586514 GRIN2AQ12879 1464 aa28.13■■■□□ 2.09
SMAD2-207ENST00000586514 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
SMAD2-207ENST00000586514 ERICH3Q5RHP9 1530 aa28.07■■■□□ 2.08
SMAD2-207ENST00000586514 FHAD1B1AJZ9 1412 aa28.06■■■□□ 2.08
SMAD2-207ENST00000586514 CEP170Q5SW79 1584 aa28.02■■■□□ 2.08
SMAD2-207ENST00000586514 NUP160Q12769 1436 aa28.01■■■□□ 2.07
SMAD2-207ENST00000586514 ERCC6L2Q5T890 1561 aa27.9■■■□□ 2.06
SMAD2-207ENST00000586514 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
SMAD2-207ENST00000586514 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
SMAD2-207ENST00000586514 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
SMAD2-207ENST00000586514 PRG4Q92954 1404 aaPredicted RBP27.74■■■□□ 2.03
SMAD2-207ENST00000586514 CUL7Q14999 1698 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms