RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
ERCC2-207ENST00000586441 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
ERCC2-207ENST00000586441 ABCC9O60706 1549 aa26.61■■□□□ 1.85
ERCC2-207ENST00000586441 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
ERCC2-207ENST00000586441 NACADO15069 1562 aa25.56■■□□□ 1.68
ERCC2-207ENST00000586441 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
ERCC2-207ENST00000586441 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
ERCC2-207ENST00000586441 ZCCHC6Q5VYS8 1495 aaKnown RBP25.21■■□□□ 1.63
ERCC2-207ENST00000586441 DCAF1Q9Y4B6 1507 aa25.19■■□□□ 1.62
ERCC2-207ENST00000586441 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.59
ERCC2-207ENST00000586441 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
ERCC2-207ENST00000586441 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
ERCC2-207ENST00000586441 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
ERCC2-207ENST00000586441 DNAJC5BQ9UF47 199 aa24.67■■□□□ 1.54
ERCC2-207ENST00000586441 SCRIBQ14160 1630 aa24.56■■□□□ 1.52
ERCC2-207ENST00000586441 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
ERCC2-207ENST00000586441 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
ERCC2-207ENST00000586441 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
ERCC2-207ENST00000586441 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
ERCC2-207ENST00000586441 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
ERCC2-207ENST00000586441 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
ERCC2-207ENST00000586441 ATAD2BQ9ULI0 1458 aa23.52■■□□□ 1.36
ERCC2-207ENST00000586441 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
ERCC2-207ENST00000586441 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
ERCC2-207ENST00000586441 PEG3Q9GZU2 1588 aa23.42■■□□□ 1.34
ERCC2-207ENST00000586441 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
ERCC2-207ENST00000586441 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
ERCC2-207ENST00000586441 WIZO95785 1651 aa23.03■■□□□ 1.28
ERCC2-207ENST00000586441 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
ERCC2-207ENST00000586441 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
ERCC2-207ENST00000586441 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
ERCC2-207ENST00000586441 NESP48681 1621 aa22.95■■□□□ 1.26
ERCC2-207ENST00000586441 CUX2O14529 1486 aa22.92■■□□□ 1.26
ERCC2-207ENST00000586441 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
ERCC2-207ENST00000586441 PDS5BQ9NTI5 1447 aa22.86■■□□□ 1.25
ERCC2-207ENST00000586441 TOP2AP11388 1531 aaKnown RBP22.82■■□□□ 1.24
ERCC2-207ENST00000586441 THOC2Q8NI27 1593 aaKnown RBP22.69■■□□□ 1.22
ERCC2-207ENST00000586441 CFTRP13569 1480 aa22.69■■□□□ 1.22
ERCC2-207ENST00000586441 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
ERCC2-207ENST00000586441 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.2
ERCC2-207ENST00000586441 CCDC88BA6NC98 1476 aa22.56■■□□□ 1.2
ERCC2-207ENST00000586441 FANCD2Q9BXW9 1451 aa22.56■■□□□ 1.2
ERCC2-207ENST00000586441 CEP164Q9UPV0 1460 aa22.55■■□□□ 1.2
ERCC2-207ENST00000586441 WDR62O43379 1518 aa22.52■■□□□ 1.19
ERCC2-207ENST00000586441 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
ERCC2-207ENST00000586441 PRDM2Q13029 1718 aa22.45■■□□□ 1.19
ERCC2-207ENST00000586441 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
ERCC2-207ENST00000586441 ABCC8Q09428 1581 aa22.28■■□□□ 1.16
ERCC2-207ENST00000586441 TOPBP1Q92547 1522 aa22.17■■□□□ 1.14
ERCC2-207ENST00000586441 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
ERCC2-207ENST00000586441 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
ERCC2-207ENST00000586441 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
ERCC2-207ENST00000586441 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
ERCC2-207ENST00000586441 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
ERCC2-207ENST00000586441 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
ERCC2-207ENST00000586441 OSCARQ8IYS5 282 aa21.95■■□□□ 1.1
ERCC2-207ENST00000586441 SOGA1O94964 1423 aa21.9■■□□□ 1.1
ERCC2-207ENST00000586441 CUX1P39880 1505 aa21.89■■□□□ 1.09
ERCC2-207ENST00000586441 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
ERCC2-207ENST00000586441 WDR97A6NE52 1622 aa21.86■■□□□ 1.09
ERCC2-207ENST00000586441 FGD5Q6ZNL6 1462 aa21.85■■□□□ 1.09
ERCC2-207ENST00000586441 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.097e-11■■■■■ 54.3
ERCC2-207ENST00000586441 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.08
ERCC2-207ENST00000586441 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
ERCC2-207ENST00000586441 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
ERCC2-207ENST00000586441 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
ERCC2-207ENST00000586441 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
ERCC2-207ENST00000586441 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
ERCC2-207ENST00000586441 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
ERCC2-207ENST00000586441 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
ERCC2-207ENST00000586441 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.05
ERCC2-207ENST00000586441 CHD1O14646 1710 aa21.62■■□□□ 1.05
ERCC2-207ENST00000586441 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
ERCC2-207ENST00000586441 FBLN2P98095 1184 aa21.6■■□□□ 1.05
ERCC2-207ENST00000586441 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
ERCC2-207ENST00000586441 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
ERCC2-207ENST00000586441 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
ERCC2-207ENST00000586441 SYNJ2O15056 1496 aa21.57■■□□□ 1.04
ERCC2-207ENST00000586441 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
ERCC2-207ENST00000586441 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
ERCC2-207ENST00000586441 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
ERCC2-207ENST00000586441 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
ERCC2-207ENST00000586441 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
ERCC2-207ENST00000586441 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
ERCC2-207ENST00000586441 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
ERCC2-207ENST00000586441 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
ERCC2-207ENST00000586441 FHAD1B1AJZ9 1412 aa21.4■■□□□ 1.02
ERCC2-207ENST00000586441 GRIN2AQ12879 1464 aa21.38■■□□□ 1.01
ERCC2-207ENST00000586441 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
ERCC2-207ENST00000586441 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
ERCC2-207ENST00000586441 NUP160Q12769 1436 aa21.32■■□□□ 1
ERCC2-207ENST00000586441 ARAP1Q96P48 1450 aa21.3■■□□□ 1
ERCC2-207ENST00000586441 KIF27Q86VH2 1401 aa21.29■■□□□ 1
ERCC2-207ENST00000586441 IGF1RP08069 1367 aa21.25■□□□□ 0.99
ERCC2-207ENST00000586441 CEP170Q5SW79 1584 aa21.23■□□□□ 0.99
ERCC2-207ENST00000586441 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
ERCC2-207ENST00000586441 CUL7Q14999 1698 aa21.18■□□□□ 0.98
ERCC2-207ENST00000586441 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
ERCC2-207ENST00000586441 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
ERCC2-207ENST00000586441 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms