RNA–Protein interactions for RNA: ENST00000586365.5

CXXC1-204, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-204ENST00000586365 NISCHQ9Y2I1 1504 aa50.16■■■■■ 5.62
CXXC1-204ENST00000586365 ABCC9O60706 1549 aa45.68■■■■■ 4.9
CXXC1-204ENST00000586365 CCDC180Q9P1Z9 1646 aa45.2■■■■■ 4.83
CXXC1-204ENST00000586365 DNAJC5BQ9UF47 199 aa43.32■■■■■ 4.53
CXXC1-204ENST00000586365 RB1CC1Q8TDY2 1594 aa43.29■■■■■ 4.52
CXXC1-204ENST00000586365 NACADO15069 1562 aa42.89■■■■■ 4.46
CXXC1-204ENST00000586365 DCAF8L2P0C7V8 631 aa42.61■■■■■ 4.41
CXXC1-204ENST00000586365 PABPN1Q86U42 306 aaKnown RBP eCLIP42.49■■■■■ 4.39
CXXC1-204ENST00000586365 UNC13AQ9UPW8 1703 aa42.27■■■■■ 4.36
CXXC1-204ENST00000586365 MYO15BQ96JP2 1530 aa42.15■■■■■ 4.34
CXXC1-204ENST00000586365 BICRAQ9NZM4 1560 aa42.01■■■■■ 4.32
CXXC1-204ENST00000586365 SHROOM4Q9ULL8 1493 aa41.45■■■■■ 4.23
CXXC1-204ENST00000586365 ZCCHC6Q5VYS8 1495 aaKnown RBP41.43■■■■■ 4.22
CXXC1-204ENST00000586365 DCAF1Q9Y4B6 1507 aa41.41■■■■■ 4.22
CXXC1-204ENST00000586365 CC2D2AQ9P2K1 1620 aa41.24■■■■■ 4.19
CXXC1-204ENST00000586365 CECR2Q9BXF3 1484 aa41.22■■■■■ 4.19
CXXC1-204ENST00000586365 SCRIBQ14160 1630 aa41.13■■■■■ 4.17
CXXC1-204ENST00000586365 EIF4G1Q04637 1599 aaKnown RBP41.03■■■■■ 4.16
CXXC1-204ENST00000586365 DNAJC5Q9H3Z4 198 aa40.19■■■■■ 4.02
CXXC1-204ENST00000586365 CUX2O14529 1486 aa39.61■■■■□ 3.93
CXXC1-204ENST00000586365 NCAPD3P42695 1498 aa39.61■■■■□ 3.93
CXXC1-204ENST00000586365 ERCC6Q03468 1493 aa39.5■■■■□ 3.91
CXXC1-204ENST00000586365 ATAD2BQ9ULI0 1458 aa39.4■■■■□ 3.9
CXXC1-204ENST00000586365 SMARCA2P51531 1590 aa39.27■■■■□ 3.88
CXXC1-204ENST00000586365 HMGXB3Q12766 1538 aa39.23■■■■□ 3.87
CXXC1-204ENST00000586365 SMARCA4P51532 1647 aa39.21■■■■□ 3.87
CXXC1-204ENST00000586365 NESP48681 1621 aa39.09■■■■□ 3.85
CXXC1-204ENST00000586365 BAZ1BQ9UIG0 1483 aaKnown RBP38.98■■■■□ 3.83
CXXC1-204ENST00000586365 BAZ1AQ9NRL2 1556 aaPredicted RBP38.96■■■■□ 3.83
CXXC1-204ENST00000586365 PEG3Q9GZU2 1588 aa38.84■■■■□ 3.81
CXXC1-204ENST00000586365 LAMC3Q9Y6N6 1575 aa38.78■■■■□ 3.8
CXXC1-204ENST00000586365 THOC2Q8NI27 1593 aaKnown RBP38.77■■■■□ 3.8
CXXC1-204ENST00000586365 MROH2BQ7Z745 1585 aa38.61■■■■□ 3.77
CXXC1-204ENST00000586365 PDS5BQ9NTI5 1447 aa38.61■■■■□ 3.77
CXXC1-204ENST00000586365 KIF21AQ7Z4S6 1674 aa38.56■■■■□ 3.76
CXXC1-204ENST00000586365 CADPSQ9ULU8 1353 aa38.39■■■■□ 3.74
CXXC1-204ENST00000586365 MRC2Q9UBG0 1479 aa38.26■■■■□ 3.72
CXXC1-204ENST00000586365 TRIM41Q8WV44 630 aa38.19■■■■□ 3.7
CXXC1-204ENST00000586365 WDR62O43379 1518 aa38.16■■■■□ 3.7
CXXC1-204ENST00000586365 WIZO95785 1651 aa38.12■■■■□ 3.69
CXXC1-204ENST00000586365 CEP164Q9UPV0 1460 aa38.01■■■■□ 3.67
CXXC1-204ENST00000586365 FANCD2Q9BXW9 1451 aa37.93■■■■□ 3.66
CXXC1-204ENST00000586365 CFTRP13569 1480 aa37.83■■■■□ 3.65
CXXC1-204ENST00000586365 OSCARQ8IYS5 282 aa37.78■■■■□ 3.64
CXXC1-204ENST00000586365 RSF1Q96T23 1441 aaPredicted RBP37.67■■■■□ 3.62
CXXC1-204ENST00000586365 URB2Q14146 1524 aaKnown RBP37.62■■■■□ 3.61
CXXC1-204ENST00000586365 TOP2AP11388 1531 aaKnown RBP37.61■■■■□ 3.61
CXXC1-204ENST00000586365 PRDM2Q13029 1718 aa37.38■■■■□ 3.57
CXXC1-204ENST00000586365 IFT140Q96RY7 1462 aa37.29■■■■□ 3.56
CXXC1-204ENST00000586365 RIMBP3CA6NJZ7 1639 aa37.25■■■■□ 3.55
CXXC1-204ENST00000586365 RIMBP3BA6NNM3 1639 aa37.25■■■■□ 3.55
CXXC1-204ENST00000586365 RIMBP3Q9UFD9 1639 aa37.25■■■■□ 3.55
CXXC1-204ENST00000586365 ZNF608Q9ULD9 1512 aaPredicted RBP37.24■■■■□ 3.55
CXXC1-204ENST00000586365 CCDC88BA6NC98 1476 aa37.22■■■■□ 3.55
CXXC1-204ENST00000586365 TOPBP1Q92547 1522 aa37.15■■■■□ 3.54
CXXC1-204ENST00000586365 ABCC8Q09428 1581 aa37.09■■■■□ 3.53
CXXC1-204ENST00000586365 ARHGEF11O15085 1522 aa37.08■■■■□ 3.53
CXXC1-204ENST00000586365 EIF4G3O43432 1585 aaKnown RBP36.99■■■■□ 3.51
CXXC1-204ENST00000586365 DNMBPQ6XZF7 1577 aa36.96■■■■□ 3.51
CXXC1-204ENST00000586365 CYB5RLQ6IPT4 315 aa36.91■■■■□ 3.5
CXXC1-204ENST00000586365 AQRO60306 1485 aaKnown RBP eCLIP36.87■■■■□ 3.498e-7■■■□□ 15.6
CXXC1-204ENST00000586365 TARBP1Q13395 1621 aaKnown RBP36.84■■■■□ 3.49
CXXC1-204ENST00000586365 CHD1O14646 1710 aa36.82■■■■□ 3.49
CXXC1-204ENST00000586365 FBLN2P98095 1184 aa36.77■■■■□ 3.48
CXXC1-204ENST00000586365 POLA1P09884 1462 aaPredicted RBP36.73■■■■□ 3.47
CXXC1-204ENST00000586365 ARAP1Q96P48 1450 aa36.68■■■■□ 3.46
CXXC1-204ENST00000586365 TRHP20396 242 aaPredicted RBP36.66■■■■□ 3.46
CXXC1-204ENST00000586365 RAD54L2Q9Y4B4 1467 aa36.6■■■■□ 3.45
CXXC1-204ENST00000586365 SOGA1O94964 1423 aa36.59■■■■□ 3.45
CXXC1-204ENST00000586365 TDRD9Q8NDG6 1382 aaKnown RBP36.57■■■■□ 3.45
CXXC1-204ENST00000586365 WDR97A6NE52 1622 aa36.46■■■■□ 3.43
CXXC1-204ENST00000586365 SNAPC4Q5SXM2 1469 aa36.45■■■■□ 3.43
CXXC1-204ENST00000586365 CHMP7Q8WUX9 453 aaPredicted RBP36.43■■■■□ 3.42
CXXC1-204ENST00000586365 FGD5Q6ZNL6 1462 aa36.43■■■■□ 3.42
CXXC1-204ENST00000586365 CLASP1Q7Z460 1538 aa36.39■■■■□ 3.42
CXXC1-204ENST00000586365 MAGI1Q96QZ7 1491 aaPredicted RBP36.37■■■■□ 3.41
CXXC1-204ENST00000586365 SYNJ1O43426 1573 aa36.36■■■■□ 3.41
CXXC1-204ENST00000586365 GRIN2BQ13224 1484 aa36.32■■■■□ 3.41
CXXC1-204ENST00000586365 CUX1P39880 1505 aa36.31■■■■□ 3.4
CXXC1-204ENST00000586365 SYNJ2O15056 1496 aa36.25■■■■□ 3.39
CXXC1-204ENST00000586365 GAPVD1Q14C86 1478 aa36.12■■■■□ 3.37
CXXC1-204ENST00000586365 PBRM1Q86U86 1689 aa36.1■■■■□ 3.37
CXXC1-204ENST00000586365 ABCA10Q8WWZ4 1543 aa36■■■■□ 3.35
CXXC1-204ENST00000586365 AEBP2Q6ZN18 517 aaPredicted RBP35.98■■■■□ 3.35
CXXC1-204ENST00000586365 ABCA5Q8WWZ7 1642 aa35.96■■■■□ 3.35
CXXC1-204ENST00000586365 GRIN2AQ12879 1464 aa35.83■■■■□ 3.33
CXXC1-204ENST00000586365 WRNQ14191 1432 aaPredicted RBP eCLIP35.79■■■■□ 3.32
CXXC1-204ENST00000586365 ERCC6L2Q5T890 1561 aa35.76■■■■□ 3.32
CXXC1-204ENST00000586365 NUP160Q12769 1436 aa35.74■■■■□ 3.31
CXXC1-204ENST00000586365 ADAMTS12P58397 1594 aa35.72■■■■□ 3.31
CXXC1-204ENST00000586365 CEP170Q5SW79 1584 aa35.71■■■■□ 3.31
CXXC1-204ENST00000586365 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
CXXC1-204ENST00000586365 SUPT5HO00267 1087 aaKnown RBP35.66■■■■□ 3.3
CXXC1-204ENST00000586365 SHROOM2Q13796 1616 aa35.61■■■■□ 3.29
CXXC1-204ENST00000586365 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
CXXC1-204ENST00000586365 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
CXXC1-204ENST00000586365 ERICH3Q5RHP9 1530 aa35.55■■■■□ 3.28
CXXC1-204ENST00000586365 PRG4Q92954 1404 aaPredicted RBP35.45■■■■□ 3.27
CXXC1-204ENST00000586365 JPH4Q96JJ6 628 aa35.44■■■■□ 3.26
CXXC1-204ENST00000586365 KIF13AQ9H1H9 1805 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms